Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq11 102 7e-17 >seq11 Length=48970052 Score = 102 bits (112), Expect = 7e-17 Identities = 171/246 (70%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 25156 TAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCAC 25215 |||||| ||| |||| ||||| | ||||| ||||| || ||||| || | ||||| Sbjct 43336489 TAGTTTGTGATTGAACAG-ATGCAGATCTTTGTGAAAACTTTGACCGGTAAGACCATCAC 43336547 Query 25216 GATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGA 25275 | || || ||| | || || ||||| | || ||| || || || ||||| Sbjct 43336548 CCTTGAGGTGGAAAGCTCAGACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAAGA 43336607 Query 25276 GGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 25335 |||||| || || ||||| || || || |||| | ||||| || ||||| || | || Sbjct 43336608 GGGTATCCCTCCGGATCAACAGAGGCTGATTTTTGCTGGCAAGCAGCTCGAGGACGGGAG 43336667 Query 25336 AAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAG 25395 || || ||||||||| ||||| || || |||||| | ||||| ||| || | || || Sbjct 43336668 AACCCTCGCCGATTACAACATTCAGAAGGAGTCCACCCTCCATTTGGTGCTACGTTTAAG 43336727 Query 25396 AGGAGG 25401 ||| || Sbjct 43336728 AGGTGG 43336733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444891125387520