Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq11 102 7e-17 >seq11 Length=48970052 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| || || || |||||||||||| |||| ||| | Sbjct 43329858 ATGCAAATATTTGTGAAAACTTTAACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43329917 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | ||||| ||| ||| ||||| |||||| | ||| || || Sbjct 43329918 GATACTATTGACAGTGTGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCGGACCAG 43329977 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || |||||||||| ||| || || ||||| |||||| | || ||| |||||||| Sbjct 43329978 CAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCTGATTACAAT 43330037 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || || ||||| || || ||||| Sbjct 43330038 ATTCAGAAAGAGTCCACCTTACAT 43330061 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| |||| || |||||||||||| |||| ||| | Sbjct 43337419 ATGCAAATATTTGTGAAAACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 43337478 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || ||| ||| ||| ||||| || ||| | || ||||| Sbjct 43337479 GATACTATTGACAATGTTAAAGCAAAGATTCAGGACAAGGAGGGCATTCCACCAGATCAG 43337538 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || |||||||||| ||| || || ||||| |||||| | || ||| || || || Sbjct 43337539 CAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCGGACTATAAT 43337598 Query 106440 ATACAAAAAGAATCTACACTACAT 106463 || || || ||||| || ||||| Sbjct 43337599 ATTCAGAAGGAATCCACTTTACAT 43337622 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| || || ||||| || |||||||| || |||| ||| Sbjct 43329402 ATGCAGATTTTTGTGAAGACTTTGACGGGAAAGACCATAACTTTGGAGGTTGAAAGTTCA 43329461 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | |||||| || ||| ||||| || || | || || || Sbjct 43329462 GATACCATTGATAACGTGAAAGCCAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 43329521 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || |||||||| | ||| || |||||| | |||||| | ||| | | ||||||||| Sbjct 43329522 CAGAGGCTTATCTTTGCTGGTAAACAACTCGAAGATGGAAGAACCCTTGCGGATTACAAC 43329581 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| || || || ||||| || |||||| | || || || Sbjct 43329582 ATCCAGAAAGAGTCCACTCTGCATTTGGTTTTGAGGCTTCGTGGTGG 43329628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402150449669888