Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq9542 111 4e-19 seq9786 100 6e-16 >seq9542 Length=931 Score = 111 bits (122), Expect = 4e-19 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 210919 TTTGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTCAAG 210978 |||||||| ||||||||| |||||||||||||||| | |||||| ||||||||||| Sbjct 3 TTTGGCGGAAGCGGTGAGATTCGAACTCACGGAGGACTCACACCCTCGTCGGTTTTCAAG 62 Query 210979 ACCGTTGCATTAAACCGCTCTGCCAC 211004 |||| ||||||||||||||||||||| Sbjct 63 ACCGGTGCATTAAACCGCTCTGCCAC 88 >seq9786 Length=898 Score = 100 bits (110), Expect = 6e-16 Identities = 75/87 (86%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 210919 TTTGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTC-GCCCTCGACGGTTTTCAA 210977 |||||||| ||||||||| ||||||||||||| | | ||||||| |||||||||| Sbjct 183 TTTGGCGGAAGCGGTGAGATTCGAACTCACGGAGGGGTATAAGCCCTCGTCGGTTTTCAA 242 Query 210978 GACCGTTGCATTAAACCGCTCTGCCAC 211004 ||||| ||||||||||||||||||||| Sbjct 243 GACCGGTGCATTAAACCGCTCTGCCAC 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113308996497728