Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq10382 89.7 8e-13 >seq10382 Length=839 Score = 89.7 bits (98), Expect = 8e-13 Identities = 206/304 (68%), Gaps = 26/304 (9%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || |||||||||||||| |||||||| ||| | || | || ||||| || || || Sbjct 90 CTGTCTTGTCAGCTCTATCAGCGCAGTGCCGATGTATTTTTAGGTGTGCCTTTTAATATT 149 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCA-----GCAGGTTAACATGGTGCCGG 198443 || ||| || ||||| || ||| | || || || | ||| |||| || Sbjct 150 GCCAGTTATGCGCTACTCACCCATATGATCGCACAAGTCTGCGGTTTA----GGTG-TGG 204 Query 198444 GCGATTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCA 198503 | || || | |||||||| || || |||||| | || | || ||| | ||||| || | Sbjct 205 GGGACTTTGTCTGGACGGGTGGCGATACACATTTATATGCCAACCATTTTGAGCAAGCAA 264 Query 198504 AGCTCCAGCTGACGCGTGAGCCGTTA--CCTTT----ACCGAAACTGATCATCAAGCG-- 198555 |||| ||| | | ||||| || ||| || | || |||||||| ||| ||| Sbjct 265 AGCTTCAGTTAAGCCGTGAACCTTTAGGGCTGTGCCAACTGAAACTGA--ATCCTGCGAT 322 Query 198556 TAAACCGGAATCTATCTTCGATTATAAATTCGAAGATTTTGAGATCGTTGGGTATCAGTC 198615 |||| || ||| ||||| | |||||| |||||| | || ||||| || ||| | || Sbjct 323 TAAA---GA---TATTTTCGACTTTAAATTTGAAGATATCGAAATCGTGGGTTATGAATC 376 Query 198616 TCAT 198619 ||| Sbjct 377 GCAT 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768842309282880