Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 170 2e-37 seq5 86.0 7e-12 >seq2 Length=36921656 Score = 170 bits (188), Expect = 2e-37 Identities = 593/907 (65%), Gaps = 20/907 (2%) Strand=Plus/Plus Query 59523 GACCCTATTCTCGCGCCGAGCACCGCGCGTTTCACAACCTTTCCTATACGGTACCCGGAT 59582 || ||| | ||||| || | | ||| || ||| | || || || | |||||| | Sbjct 1442163 GAGCCTCTCCTCGCTCCCAACCCCGACCGCTTCTGCATGTTCCCAATCCAGTACCCCCAA 1442222 Query 59583 CTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTC 59642 | |||| |||| |||||||| | || |||||| | | |||||| | |||||| Sbjct 1442223 ATCTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACGGCGGAGGAGGTCGACCTC 1442282 Query 59643 GCCGGAGACCTGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATG 59702 | ||||| | |||||| |||| ||| ||| | || ||| ||| Sbjct 1442283 TCGCAGGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAACGCCACTTCGTCACCCAC 1442342 Query 59703 GTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTT 59762 ||||| |||||||| || || || || || || | || ||| | | | ||| Sbjct 1442343 GTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTCCTCGAGAATCTCGCCGGCCGCTTC 1442402 Query 59763 TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGA 59821 ||||| |||| | |||||||| || | ||||||| | || ||| || ||| Sbjct 1442403 ATGAAGGAGATCCAAGTCGCCGAGGCTCGCGCCTTCTACGGCTTCCAAATCGC-CATCGA 1442461 Query 59822 GTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAG-GATCCGGAAG 59880 | ||||||||||||| |||| ||| | |||| | | ||||| | |||| | | Sbjct 1442462 GAACATCCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATCAAGAGCTCCG-ACG 1442520 Query 59881 AGAAGGCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAA 59939 ||||| || |||| ||||| || || ||||| || ||| | || || || Sbjct 1442521 AGAAGCACCACCTCTTCCACGCCATCGAAACCATCCCCTGC-GTTGCCAAGAAGGCCCAA 1442579 Query 59940 TGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGC 59998 |||||| ||| ||||| || |||| | || || || | || || | || || || Sbjct 1442580 TGGGCCCTGCGCTGGATCGACTCCTCCGAC-TCCTTCGCTGAGCGCATCGTCGCCTTCGC 1442638 Query 59999 ATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCG 60058 ||||| || ||||||||||||||||| ||||| | |||||||||||||| ||||| Sbjct 1442639 CTGCGTCGAGGGAATCTTCTTCTCTGGAAGCTTCTGCTCCATTTTCTGGCTCAAGAAGCG 1442698 Query 60059 TGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||| | ||||| ||||| | |||||||||||| || |||||||| |||||||| || || Sbjct 1442699 CGGCTTGATGCCTGGCCTCACTTTCTCCAACGAACTCATTTCCCGCGACGAGGGGCTTCA 1442758 Query 60119 TCAGGAGTTTGCAGTGACGC-TCTATTCACACCTATTGGAAAAATGCCCTTCCA--AGGA 60175 || || || || | | | || || | || |||| || || | | | || Sbjct 1442759 CTGCGACTTCGC-CTGCCTCTTGTACTCTCTGCT-GAGGAAGAA-GCTCAGCGAGGAGCG 1442815 Query 60176 TATTCACAAGATTGTTCAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCT 60235 | | |||| || | ||| || | ||||| ||||| | || ||||| Sbjct 1442816 CGTGAAGGAGATCGTGAGGGACGCTGTGGATATCGAGAGGGAGTTTGTGTGCGACGCGCT 1442875 Query 60236 TCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACG---CAGTACATTCAGTTTGT 60292 ||| ||| | | || ||| | ||| || ||| | ||||||||| ||||||| Sbjct 1442876 TCCGTGCGCGTTGCTGGGGATGAA---TGGGGAGTTGATGGGTCAGTACATTGAGTTTGT 1442932 Query 60293 CGCGGACCGCCTCATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTT 60352 ||||| || | ||| | |||| || | ||| || | |||||||| Sbjct 1442933 GGCGGATCGTTTGTTGGTTGCGCTTGGCTGCGGGAAGGTGTACAATGTTCAGAACCCTTT 1442992 Query 60353 CGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGG 60412 |||||||||||| || |||||| | ||||||||||| |||||||||||||| || || Sbjct 1442993 TGACTGGATGGAGCTGATTTCGTTGCAGGGGAAGACCAATTTCTTTGAGAAGCGCGTGGG 1443052 Query 60413 GGATTAT 60419 ||| ||| Sbjct 1443053 GGAGTAT 1443059 >seq5 Length=5133333 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 79045 GGTAG-GCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGAT 79103 ||||| ||| | |||||||||||||||||| || || || || || | | ||| || Sbjct 4456731 GGTAGAGCA-ATCGATGCCAGGTTGCACACAGCTGTTTCTGTTGGACTTGTATACTCAAT 4456789 Query 79104 GATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTC 79163 || || |||||||| || ||||||||||| ||||| | |||| |||||||||||| Sbjct 4456790 TATCTCAGTGCACAAGTTTGACGACTTGATTGTGCCCAGATTCTGTTGGTTGCTCTTCCT 4456849 Query 79164 GTTACAGGCGTCCT 79177 || || | ||||| Sbjct 4456850 ATTGCAAGAGTCCT 4456863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548274288723840