Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq27021 80.6 6e-11 >seq27021 Length=265 Score = 80.6 bits (88), Expect = 6e-11 Identities = 122/170 (72%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 5710 CATCCACGATATAGCCGTTTGTTTTCAGCTCACGGAATTTGGCATTGATGCCGTCAACGA 5769 || ||| || |||||||| | | || |||| || |||||| ||||| |||| || Sbjct 214 CACCCATGAGGTAGCCGTTATTGGTTAGGTCACTGAGTTTGGCGCGAATGCCCTCAATGA 155 Query 5770 TGTCGCGAATCAGCGTTGCGGTGATG-GGCTTGTCCACCGCCCACATATGCGCCTCAGCC 5828 ||||| ||| | || | ||| | || || || || |||||||||||||| ||||| Sbjct 154 GGTCGCTGGCCAGTGATG-GATGAAGTGGTTTATCGACTGCCCACATATGCGCTTCAGCA 96 Query 5829 ATCGTGTCGGCCAGCACCTGCGCGGTGCGGGTGTAGTTTTCAAAGAGGAA 5878 | |||||| || | | || || ||||| |||||||| || || ||||| Sbjct 95 ACCGTGTCAGCAATGATTTGAGCCGTGCGTGTGTAGTTCTCGAA-AGGAA 47 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104393087833584