Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq23225 105 2e-18 seq21465 91.5 3e-14 >seq23225 Length=309 Score = 105 bits (116), Expect = 2e-18 Identities = 114/153 (75%), Gaps = 16/153 (10%) Strand=Plus/Plus Query 24395 AGTGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTCTGTCAGA 24454 |||||| || |||||||| |||||||||| | | |||| | || Sbjct 173 AGTGTACTAGCTCAAACCTGATCTGACAGTTACACATTTT---------------TTAGT 217 Query 24455 TTAATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGCCAT 24514 | | |||||||| |||||||| || ||||||||||||||||||||||||| ||| | | Sbjct 218 TAATTTTGAGCT-AAATTCTTCTCAGCCCAAATCCGTTTTCCATCAAGTAAAGTTTCAAG 276 Query 24515 CGGTGTTCTGCCACAGCACATTTTTCCTTGATG 24547 ||||| | ||||||||||||||||||||||| Sbjct 277 TGGTGTACGACCACAGCACATTTTTCCTTGATG 309 >seq21465 Length=335 Score = 91.5 bits (100), Expect = 3e-14 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 2632 AATATAGGCTCTAAATTGCAATGCCTGTTTTTTCGAGGCGGAAATAAAAATCTGATTTCT 2691 |||||||| | |||| ||||||| ||| || || |||| |||||||||||| | Sbjct 140 AATATAGGATTTAAAAACGTGTGCCTGTGCTTTGGAAGCAGAAAGAAAAATCTGATTACC 81 Query 2692 ACCGGTTACTAACGCATCAACTAACGCCTCGTGAGCAAAATAATAAGTCGCTCCAATTTG 2751 ||| | | ||||||||| || || || | |||| ||||| ||||| |||||||| Sbjct 80 TCCGCCTGTGATCGCATCAACGAAAGCTTCTCGCCCAAAGTAATACGTCGCGCCAATTTG 21 Query 2752 ACGACTTTTAAGAATATTGC 2771 ||||||||| | ||||||| Sbjct 20 ACGACTTTTTAAGATATTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114273599164832