Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq776 82.4 2e-11 seq11 82.4 2e-11 seq36536 80.6 9e-11 seq1222 80.6 9e-11 seq719 80.6 9e-11 seq625 80.6 9e-11 seq10 80.6 9e-11 >seq776 Length=110407 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 72631 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 72690 Query 21210 CTGTCTCCGCAAC 21222 | ||||||||||| Sbjct 72691 CCGTCTCCGCAAC 72703 >seq11 Length=48970052 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 45754822 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 45754763 Query 21210 CTGTCTCCGCAAC 21222 | ||||||||||| Sbjct 45754762 CCGTCTCCGCAAC 45754750 >seq36536 Length=153841 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 |||||||||||| | |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 24887 CGGAGTAGAGCAACTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 24946 Query 21210 CTGTCTCCGCAA 21221 | |||||||||| Sbjct 24947 CCGTCTCCGCAA 24958 >seq1222 Length=64363 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 |||||||||||| | |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 59001 CGGAGTAGAGCAACTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 59060 Query 21210 CTGTCTCCGCAA 21221 | |||||||||| Sbjct 59061 CCGTCTCCGCAA 59072 >seq719 Length=120755 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 |||||||||||| | |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 11513 CGGAGTAGAGCAACTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 11572 Query 21210 CTGTCTCCGCAA 21221 | |||||||||| Sbjct 11573 CCGTCTCCGCAA 11584 >seq625 Length=139143 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 |||||||||||| | |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 86655 CGGAGTAGAGCAACTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 86714 Query 21210 CTGTCTCCGCAA 21221 | |||||||||| Sbjct 86715 CCGTCTCCGCAA 86726 >seq10 Length=22571102 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 |||||||||||| | |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 21612364 CGGAGTAGAGCAACTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 21612305 Query 21210 CTGTCTCCGCAA 21221 | |||||||||| Sbjct 21612304 CCGTCTCCGCAA 21612293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162454286177648