Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq10382 86.0 5e-12 >seq10382 Length=839 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 126070 TTGCATCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCA 126129 |||| || | ||| |||| ||| | ||||| ||| ||| || | || || |||| Sbjct 260 TTGC-TCAAAATGGTTGGCATATAAATGTGTATCGCCACCCGTCCAGACAAAGTCCCCCA 202 Query 126130 CCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGA 126189 | | | || || ||| ||| | | ||| || |||| |||||||| |||||||| | Sbjct 201 CACCTAAACCGCAGACTTGTGCGATCATATGGGTGAGTAGCGCATAACTGGCAATATTAA 142 Query 126190 AAGGAACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCT 126249 |||| ||||||||||||| ||| ||||| | ||||| | |||||| | ||| || | Sbjct 141 AAGGCACACCTAAAAATACATCGGCACTGCGCTGATAGAGCTGACAAGACAGTTTGCCGT 82 Query 126250 CTTGTACGTAAAATTGAAACATTGTGTGGCAAGGTGG 126286 || || | || || || | |||||||| || || Sbjct 81 TATGGACAAAGAACTGGAATAGAGTGTGGCACGGAGG 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408416458282952