Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 6e-12 >seq6 Length=23791330 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||| |||||| | || || || || ||| ||||| || || ||||| || | Sbjct 10196884 ACATGAGCAATCATGCATGTCAGGAGCGCATAAGATGCAATATTAAATGGCACACCCAGA 10196943 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||||||| | ||||| ||||| | ||| || || | |||||||||||| || ||||| Sbjct 10196944 CCCATGTCGGCTGATCGCTGATACATCTGACACGATAACTCCCCATTCGCTACATAGAAC 10197003 Query 6737 TG 6738 || Sbjct 10197004 TG 10197005 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 34607 CAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATG 34666 || ||||| || |||||||||||| | || || ||| | ||||| ||||| | |||||| Sbjct 10197005 CAGTTCTATGTAGCGAATGGGGAGTTATCGTGTCAGATGTATCAGCGATCAGCCGACATG 10196946 Query 34667 GGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCAT 34726 || | || ||||| || || ||||| ||| || || || || | |||||| |||||| Sbjct 10196945 GGTCTGGGTGTGCCATTTAATATTGCATCTTATGCGCTCCTGACATGCATGATTGCTCAT 10196886 Query 34727 GT 34728 || Sbjct 10196885 GT 10196884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448057678561920