Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq531 93.3 3e-14 seq6 84.2 2e-11 >seq531 Length=161886 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| |||||| | || || | |||||| ||||||||||||||| Sbjct 63153 TGAGCAATCATGCATGTCAGGAGGGCATAAGAAGCAATATTAAATGGAACACCCAGACCC 63212 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || |||| |||||||| ||| || || | |||||| | || ||||||||||| Sbjct 63213 ATGTCAGCAGATCGCTGGTACATTTGACATGATAACTCCCCATGAGCTACATAAAACTG 63271 >seq6 Length=23791330 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| |||||| | || || | |||||| || |||||||||||| Sbjct 10196887 TGAGCAATCATGCATGTCAGGAGCGCATAAGATGCAATATTAAATGGCACACCCAGACCC 10196946 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| ||||||| ||| |||| || || || | |||||| || || ||||| ||||| Sbjct 10196947 ATGTCGGCTGATCGCTGATACATCTGACACGATAACTCCCCATTCGCTACATAGAACTG 10197005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414292240734304