Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 5e-12 seq848 84.2 2e-11 >seq11 Length=48970052 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 || || || || ||||| |||||||||||||| |||| || |||||||||||| Sbjct 43330060 TGTAAGGTGGACTCTTTCTGAATATTGTAATCAGCCAAGGTACGACCATCTTCCAATTGC 43330001 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| | |||||||| || ||||| ||| | |||||| ||||| ||| ||| Sbjct 43330000 TTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGAATCTTT 43329941 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTTTTGCCCG 101213 |||||| | | | || || | | | || || | |||||| || || || | Sbjct 43329940 GCCTTCACACTGTCAATAGTATCAGAG--CTTTCCACCTCCAAGGTAATGGTCTTCCCTG 43329883 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 | || ||||| | ||| |||||||| Sbjct 43329882 TTAAAGTTTTCACAAATATTTGCAT 43329858 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| ||| | || || || || || || |||||||| || | ||| | |||| Sbjct 43329385 AAAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTTCTTCCATCT 43329326 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 |||| ||||| || ||| | |||||||| || |||||| || | || || ||||| Sbjct 43329325 TCCAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCC 43329266 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT--TCGACGGTAATAG 101204 ||| || |||||||| | | ||| |||| || || || | ||| |||| Sbjct 43329265 TGAATCTTGGCTTTCACATTATCAATCGTATCTGA--ACTTTCAACCTCCAAGGTGATAG 43329208 Query 101205 TTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 | || |||||||| ||||| | ||||||||||| Sbjct 43329207 TCTTTCCCGTCAAAGTTTTGACGAAAATTTGCAT 43329174 >seq848 Length=99386 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || || | ||| | ||| || ||||| ||||| |||||||| || | ||| | ||| Sbjct 64279 AAGACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCAGCAAGAGTCCTTCCATCC 64220 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 |||||||| || || ||| | || | ||||||||||||| || | || || ||||| Sbjct 64219 TCCAATTGCTTCCCAGCAAAGATCAACCTTTGTTGGTCTGGTGGAATTCCCTCCTTGTCT 64160 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAG 101204 |||||| ||| |||| | | | || || || || || || | |||||||| Sbjct 64159 TGGATTTTTGCTTTGACATTGTCAATAGTGTC--TGAACTTTCAACCTCCAAGGTAATAG 64102 Query 101205 TTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 | || || ||||| || || | ||| || ||||| Sbjct 64101 TCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 64068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409478385214824