Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq13 105 4e-18 seq2 105 4e-18 seq16 98.7 6e-16 seq17 95.1 8e-15 seq7 95.1 8e-15 seq8 91.5 1e-13 seq5 89.7 3e-13 seq20 86.0 4e-12 seq14 84.2 1e-11 seq11 84.2 1e-11 seq3 84.2 1e-11 seq12 82.4 5e-11 >seq13 Length=24101694 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | || ||||||||| ||||||||||||| | Sbjct 21466214 CCACCACGGAGCCTGAGGACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGCC 21466155 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | ||| |||| || | ||||| || ||||| || |||| |||||| || || Sbjct 21466154 AACGTACGCCCGTCCTCTAGTTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 21466095 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| ||| || Sbjct 21466094 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACC 21466035 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || ||||||||||| || || |||||||||||| Sbjct 21466034 TCTAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 21465987 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | ||| || ||||| ||||||||||| | | Sbjct 21466898 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCC 21466839 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | || || | || || | ||| ||||| ||||| ||||| ||||||||||| || Sbjct 21466838 AAGGTG-CGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 21466780 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||| | || | | || | |||| || || Sbjct 21466779 AATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATAGTGTCGGAGCTCTCCAC 21466720 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| ||||||||||| | ||| || || ||||||||||| Sbjct 21466719 TTCCAAGGTGATAGTTTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 21466672 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | |||| ||| ||||| ||||||||||| | | Sbjct 2029766 CCACCACGGAGCCTGAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGCC 2029825 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | |||||| || ||||| || |||| ||||| || || Sbjct 2029826 AAGGTACGTCCATCTTCTAGCTGCTTACCGGCGAAGATAAGCCTTTGCTGATCCGGAGGA 2029885 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TTC 34338 | | |||||||| ||| || ||||| || | | |||| | ||| || ||| Sbjct 2029886 ATACCTTCCTTGTCCTGGATC-TTGGCTTT-GA--CGTTGTCGATTGTGTCAGAGCTTTC 2029941 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || | ||||| || || ||||||||||| || ||||||||||||||| Sbjct 2029942 CACCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCATC 2029993 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || || | || || | |||||| || ||||| Sbjct 2029118 TCCTTCTGGATGTTGTAGTCGGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAG 2029177 Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 ||||| ||||||||||| || || || || |||||||| || || ||| | || Sbjct 2029178 ATGAGACGCTGCTGGTCCGGAGGGATAC-CT-TCCTTGTCCTGGATTTTAGCCTTGACAT 2029235 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | |||| || || || | |||||||| ||||| |||||||| || | Sbjct 2029236 TGTCAATGGTGTCGGAGCTCTCAACCTCGAGTGTGATGGTCTTGCCTGTGAGAGTCTTGA 2029295 Query 34377 CAAAGATCTGCAT 34389 |||| |||||||| Sbjct 2029296 CAAAAATCTGCAT 2029308 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | || || ||||| ||||||||||| | | Sbjct 3264426 CCACCACGAAGCCTTAGCACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCAGCC 3264485 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 | || | || || | ||| ||||| ||||| ||||| || |||||||| || || Sbjct 3264486 AATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGG 3264545 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 || || |||||||| || || ||| | || | | || | |||| || | Sbjct 3264546 ATAC-CT-TCCTTGTCCTGGATTTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAA 3264603 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | |||||||| ||||| |||||||| || || || |||||||| Sbjct 3264604 CCTCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTGACGAAAATCTGCAT 3264652 Score = 82.4 bits (90), Expect = 5e-11 Identities = 164/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || ||| ||| | ||| ||| ||||| ||||||||||| | | Sbjct 3265110 CCACCACGGAGCCTGAGGACCTAGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCC 3265169 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 | |||| | || || | |||||| || || || || |||| ||||| || || || Sbjct 3265170 AAGGTACGGCCATCTTCTAGCTGCTTACCGGCAAAGATAAGCCTTTGCTGATCCGGAGGG 3265229 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---T 34336 || || ||||| || ||| || ||||| || | | |||| | ||| || | Sbjct 3265230 ATAC-CT-TCCTTATCCTGGATC-TTGGCTTT-GA--CGTTGTCGATTGTGTCAGAGCTT 3265283 Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || | ||||| || || ||||||||||| || ||||||||||||||| Sbjct 3265284 TCCACCTCAAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACAAAGATCTGCATC 3265337 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | || || | || || | |||||| || ||||| Sbjct 5373668 TCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAG 5373609 Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 ||||| ||||||||||| || || || || |||||||| ||||| ||| | | Sbjct 5373608 ATGAGACGCTGCTGGTCCGGAGGGATAC-CT-TCCTTGTCCTGGATCTTGGCCTTCACGT 5373551 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | |||| || || || | |||||||| ||||| |||||||| || | Sbjct 5373550 TGTCAATGGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTGA 5373491 Query 34377 CAAAGATCTGCAT 34389 |||| |||||||| Sbjct 5373490 CAAAAATCTGCAT 5373478 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | || |||| ||| | ||| || ||||| ||||||||||| Sbjct 21467130 GAAACCACCACGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTC 21467071 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--G 34276 | || || | || || | ||| ||||| ||||| ||||| ||||||||||| | Sbjct 21467070 AGCCAATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGG 21467011 Query 34277 ACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGAT 34336 | || || || |||||||| ||||| ||| | || | | || | |||| Sbjct 21467010 AGGGATAC-CT-TCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTGTCGGAGCTC 21466953 Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || | |||||||| || ||||| | || ||||| ||||||||||| Sbjct 21466952 TCAACCTCGAGTGTGATGGTCTTCCCGGTCAATGTCTTCACGAAGATCTGCAT 21466900 >seq2 Length=29139806 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | ||| ||| ||||| |||||||| |||| | Sbjct 2807246 CCACCACGAAGCCTGAGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCGGCC 2807305 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || ||||||||||| || ||||| || |||| |||||| || || Sbjct 2807306 AAGGTACGACCATCCTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 2807365 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | | | | || | || | ||| || Sbjct 2807366 ATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACC 2807425 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || |||||||||||||| ||||||||||||||| Sbjct 2807426 TCGAGGGTGATTGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCATC 2807473 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | || |||| ||| | |||| || ||||| ||||||||||| Sbjct 2806102 GAAACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 2806161 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278 | || ||| | || || | |||||| || ||||| ||||| ||||||||||| Sbjct 2806162 AGCCAATGTACGTCCATCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGG 2806221 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTC 34338 || | | |||||||| ||||| ||| | || | | || | |||| || Sbjct 2806222 AGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTC 2806281 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||||| || ||||| | ||| || || ||||||||||| Sbjct 2806282 AACCTCCAGTGTGATGGTCTTCCCGGTCAAAGTCTTGACGAAGATCTGCAT 2806332 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | || || ||||| ||||||||||| | | Sbjct 2806334 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 2806393 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 | || | || || | ||| ||||| ||||| ||||| ||||||||||| || || Sbjct 2806394 AATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 2806453 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 || || |||||||| ||||| ||| | | | | || | |||| || | Sbjct 2806454 ATAC-CT-TCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAA 2806511 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || ||||| || ||||||||||| || || ||||||||||| Sbjct 2806512 CTTCCAAAGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 2806560 >seq16 Length=29110212 Score = 98.7 bits (108), Expect = 6e-16 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||||| || ||| |||| || | |||||| || ||||| Sbjct 693501 TTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAA 693560 Query 34258 AATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 ||| | |||||||||| || ||| | || |||||||| ||| || ||||| | | Sbjct 693561 AATCAAACGCTGCTGGTCCGGTGGGATCCCT-TCCTTGTCTTGGATC-TTCGCTTTCACA 693618 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| || ||||| || | || || || || || || || |||||| Sbjct 693619 TTGTCGATGGTGTCGGAGGACTCGACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTC 693678 Query 34376 ACAAAGATCTGCATC 34390 || |||||||||||| Sbjct 693679 ACGAAGATCTGCATC 693693 Score = 98.7 bits (108), Expect = 6e-16 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||||| || ||| |||| || | |||||| || ||||| Sbjct 697701 TTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAA 697760 Query 34258 AATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 ||| | |||||||||| || ||| | || |||||||| ||| || ||||| | | Sbjct 697761 AATCAAACGCTGCTGGTCCGGTGGGATCCCT-TCCTTGTCTTGGATC-TTCGCTTTCACA 697818 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| || ||||| || | || || || || || || || |||||| Sbjct 697819 TTGTCGATGGTGTCGGAGGACTCGACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTC 697878 Query 34376 ACAAAGATCTGCATC 34390 || |||||||||||| Sbjct 697879 ACGAAGATCTGCATC 697893 >seq17 Length=35492130 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/195 (73%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||||| || ||| |||| || | |||||| || ||||| Sbjct 29037354 TTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 29037413 Query 34258 AATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 ||| | |||||||||| || ||| | || |||||||| ||| || ||||| | | Sbjct 29037414 AATCAAACGCTGCTGGTACGGTGGGATCCCT-TCCTTGTCTTGGATC-TTCGCTTTCACA 29037471 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | || | || ||||| || ||| ||||| || || || || |||||| Sbjct 29037472 TTGTCGATGGTCTCAGATGACTCGACCTCTTGCGTAATGGTCTTCCCCGTTAG-GTTTTC 29037530 Query 34376 ACAAAGATCTGCATC 34390 || |||||||||||| Sbjct 29037531 ACGAAGATCTGCATC 29037545 >seq7 Length=33617777 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||||| || ||| |||| || | |||||| || ||||| Sbjct 664208 TTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 664267 Query 34258 AATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 ||| | |||||||||| || ||| | || |||||||| ||| || ||||| | | Sbjct 664268 AATCAAACGCTGCTGGTCCGGAGGGATCCCT-TCCTTGTCTTGGATC-TTCGCTTTCACA 664325 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| || || || || | || || || || || || || |||||| Sbjct 664326 TTGTCGATGGTGTCGGATGACTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTC 664385 Query 34376 ACAAAGATCTGCATC 34390 || |||||||||||| Sbjct 664386 ACGAAGATCTGCATC 664400 >seq8 Length=27720346 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | || || ||||| ||||||||||| | | Sbjct 20847355 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 20847296 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACG 34279 | | || || | || || | ||| ||||| ||||| ||||| ||||||||||| || | Sbjct 20847295 AAGGTG-CGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 20847237 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTC 34338 | || || |||||||| ||| || ||||| | | | | || | || | || Sbjct 20847236 GATAC-CT-TCCTTGTCCTGGATC-TTAGCTTTCACGTTGTCGATGGTGTCAGAGCTCTC 20847180 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| ||||| || || ||||| ||||| ||||| ||||||||||| Sbjct 20847179 CACCTCCAAAGTGATTGTCTTCCCGGTAAGAGTCTTCACGAAGATCTGCAT 20847129 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | || || ||||| ||||||||||||| | Sbjct 20846899 CCACCACGAAGCCTGAGAACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCC 20846840 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | ||| |||| || | ||||| || ||||| || |||| |||||| || || Sbjct 20846839 AACGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 20846780 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| ||| || Sbjct 20846779 ATGCCTTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACC 20846720 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || ||||| || || |||||||||||| Sbjct 20846719 TCTAGGGTGATTGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCATC 20846672 Score = 82.4 bits (90), Expect = 5e-11 Identities = 164/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| || | ||| ||| ||||| || |||||||| | | Sbjct 24116092 CCACCACGAAGCCTGAGGACCAAATGAAGAGTGGATTCCTTCTGGATATTGTAGTCAGCC 24116033 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 | |||| | || || | |||||| || ||||| || |||| ||||| || || || Sbjct 24116032 AAGGTACGGCCATCTTCTAGCTGCTTACCGGCGAAGATAAGCCTTTGCTGATCCGGAGGG 24115973 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---T 34336 || || |||||||| ||||| ||||| || | | |||| | ||| || | Sbjct 24115972 ATAC-CT-TCCTTGTCCTGGATCTTG-GCTTT-GAC--GTTGTCGATTGTGTCAGAGCTT 24115919 Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || | ||||| || || ||||||||||| || |||||||| |||||| Sbjct 24115918 TCCACCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACAAAGATTTGCATC 24115865 >seq5 Length=34971402 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||||| || || |||| || | |||||| || ||||| Sbjct 34224675 TTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCTTCTAGCTGCTTCCCGGCGAA 34224616 Query 34258 AATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 ||| | ||||||||||| | ||| | || |||||||| ||||| ||||| | | Sbjct 34224615 AATCAAACGCTGCTGGTCCGGTGGGATCCCT-TCCTTGTCTTGGATCTTC-GCTTTCACA 34224558 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| || || || || | || || || || || || || |||||| Sbjct 34224557 TTGTCGATGGTGTCGGATGACTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTC 34224498 Query 34376 ACAAAGATCTGCATC 34390 || |||||||||||| Sbjct 34224497 ACGAAGATCTGCATC 34224483 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| | | ||| |||| || | |||||| || ||||| Sbjct 491964 TTCCTTCTGGATGTTGTAGTCCGCTAAAGTACGTCCGTCCTCGAGCTGCTTTCCGGCGAA 492023 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| | ||||||||||| || | | |||||||| ||||| ||| | || Sbjct 492024 AATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATT 492083 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || || || || | ||||| || || || || || |||||||| Sbjct 492084 GTCGATGGTGTCAGATGACTCCACCTCGAGTGTGATCGTCTTCCCCGTTAGGGTTTTCAC 492143 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 492144 GAAGATCTGCATC 492156 >seq20 Length=30099736 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | || || | || || | |||||| || ||||| Sbjct 3386833 TCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAG 3386892 Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 ||||| ||||||||||| || || || || |||||||| ||||| ||| | | Sbjct 3386893 ATGAGACGCTGCTGGTCCGGAGGGATAC-CT-TCCTTGTCCTGGATCTTAGCCTTCACGT 3386950 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | |||| || || |||| |||||||| ||||| |||||||| |||| Sbjct 3386951 TATCAATAGTGTCGGAGCTCTCAACCTCCAGTGTGATGGTCTTGCCTGTGAGAGTCTTCA 3387010 Query 34377 CAAAGATCTGCAT 34389 |||| |||||||| Sbjct 3387011 CAAAAATCTGCAT 3387023 >seq14 Length=31758599 Score = 84.2 bits (92), Expect = 1e-11 Identities = 166/239 (69%), Gaps = 5/239 (2%) Strand=Plus/Minus Query 34153 TTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTT 34212 ||| ||| | || || | ||| | |||||||| || | || |||||||| ||||| Sbjct 11737853 TTCTTCGCA-CCTCCCCTCAGACGCAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTT 11737795 Query 34213 GTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTG 34272 ||| |||| ||| | |||| |||| ||| || || || || || || |||||||| Sbjct 11737794 GTAATCGGCTAGCGTTCTCCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAGACGCTGCTG 11737735 Query 34273 GTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCG 34330 || | ||| | || |||||||| ||||| ||||| | || | | |||| || Sbjct 11737734 ATCCGGTGGGATCCCT-TCCTTGTCTTGGATCTTC-GCTTTCACATTGTCGATCGTGTCT 11737677 Query 34331 GTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || || || | || || || || || || || |||||||||||||||||||| Sbjct 11737676 GATGACTCAACCTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 11737618 >seq11 Length=49703607 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | || |||| ||| | || ||| ||||| ||||||||||| Sbjct 3120716 AAACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCA 3120775 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GA 34277 | || || | || || | |||||| || ||||| ||||| ||||||||||| || Sbjct 3120776 GCCAAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 3120835 Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATT 34337 || || || |||||||| ||||| ||| | || | | || | |||| | Sbjct 3120836 GGGATAC-CT-TCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCT 3120893 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||| |||||||| || ||||| | ||| ||||| || |||||||| Sbjct 3120894 CAACCTCCAGTGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCAT 3120945 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | || |||| ||| | || ||| ||||| ||||||||||| Sbjct 3123314 AAACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCA 3123373 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GA 34277 | || || | || || | |||||| || ||||| ||||| ||||||||||| || Sbjct 3123374 GCCAATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 3123433 Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATT 34337 || || || |||||||| ||||| ||| | || | | || | |||| | Sbjct 3123434 GGGATAC-CT-TCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCT 3123491 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||| |||||||| || ||||| | ||| ||||| || |||||||| Sbjct 3123492 CAACCTCCAGTGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCAT 3123543 Score = 84.2 bits (92), Expect = 1e-11 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | |||| ||| ||||| ||||||||||| | | Sbjct 3123773 CCACCACGAAGCCTGAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGCC 3123832 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 | | | |||| || | |||||| || || || || |||| ||||| || || || Sbjct 3123833 AAGGTCCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATAAGCCTTTGCTGATCCGGAGGG 3123892 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG 34339 || || |||||||| ||| || ||||| | | | | || | ||| | ||| Sbjct 3123893 ATAC-CT-TCCTTGTCCTGGATC-TTGGCTTTGACGTTGTCGATTGTATCAGAGCTTTCC 3123949 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || | ||||| || || ||||||||||| || || ||||| |||||| Sbjct 3123950 ACCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACGAAGATTTGCATC 3124000 >seq3 Length=28500605 Score = 84.2 bits (92), Expect = 1e-11 Identities = 166/239 (69%), Gaps = 5/239 (2%) Strand=Plus/Minus Query 34153 TTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTT 34212 ||| ||| | || || | ||| | |||||||| || | || |||||||| ||||| Sbjct 10831937 TTCTTCGCA-CCTCCCCTCAGACGCAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTT 10831879 Query 34213 GTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTG 34272 ||| |||| ||| | |||| |||| ||| || || || || || || |||||||| Sbjct 10831878 GTAATCGGCTAGCGTTCTCCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAGACGCTGCTG 10831819 Query 34273 GTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCG 34330 || | ||| | || |||||||| ||||| ||||| | || | | |||| || Sbjct 10831818 ATCCGGTGGGATCCCT-TCCTTGTCTTGGATCTTC-GCTTTCACATTGTCGATCGTGTCT 10831761 Query 34331 GTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || || || | || || || || || || || |||||||||||||||||||| Sbjct 10831760 GATGACTCAACCTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 10831702 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||||| || ||| |||| || | |||||| || ||||| Sbjct 24015033 TTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAA 24014974 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 ||| | ||||||||||| || | | |||||||| ||| || ||||| | || Sbjct 24014973 AATCAAACGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATC-TTCGCTTTCACAT 24014915 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | || | || || || || | || || || || || | || ||||||| Sbjct 24014914 TGTCGATGGTGTCAGAGGACTCAACCTCTAGGGTTATCGTCTTCCCCATTAGGGTTTTCA 24014855 Query 34377 CAAAGATCTGCATCG 34391 | ||||||||||||| Sbjct 24014854 CGAAGATCTGCATCG 24014840 >seq12 Length=33044737 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | || |||| ||| | || ||| ||||| ||||||||||| Sbjct 2891056 GAAACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTC 2891115 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--G 34276 | || || | || || | |||||| || ||||| ||||| ||||||||||| | Sbjct 2891116 AGCCAAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGG 2891175 Query 34277 ACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGAT 34336 | || || || |||||||| ||||| ||| | || | | || | |||| Sbjct 2891176 AGGGATAC-CT-TCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTC 2891233 Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || |||| |||||||| || ||||| | ||| || || || |||||||| Sbjct 2891234 TCAACCTCCAGTGTGATGGTCTTCCCGGTCAAAGTCTTAACGAAAATCTGCAT 2891286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322925479982720