Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq20 116 4e-21 seq13 113 5e-20 seq8 107 2e-18 seq14 104 2e-17 seq3 104 2e-17 seq17 98.7 1e-15 seq10 89.7 5e-13 seq6 89.7 5e-13 seq5 89.7 5e-13 seq4 86.0 6e-12 seq11 84.2 2e-11 >seq20 Length=30099736 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | ||| || |||| ||| |||||||| || ||||||||||| | Sbjct 14739660 CCACCTCTTAAACGAAGAACCAAGTGAAGTGTTGATTCTTTCTGGATGTTGTAATCTGCC 14739601 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | || || || |||||||||||| |||||| | ||||||||| ||||| Sbjct 14739600 AAGGTACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAATCTTTGCTGATCCGGAGGA 14739541 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| || ||| || | | || | ||||| | | || || Sbjct 14739540 ATCCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACC 14739481 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | |||||| ||||| |||||||| Sbjct 14739480 TCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 14739434 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | ||| || || | ||| |||||||| || ||||||||||| | Sbjct 11036863 CCACCTCTTAAACGGAGAACCAAGTGGAGTGTTGATTCTTTCTGAATGTTGTAATCAGCC 11036922 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| || |||||||| ||| |||||| | ||||||||| ||||| Sbjct 11036923 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGGA 11036982 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| || || || | | || | ||||| | | || || Sbjct 11036983 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGACC 11037042 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | ||||| || || | |||||| ||||| |||||||| Sbjct 11037043 TCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 11037089 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||||| | ||| || || | || || || || || ||||||||||| | Sbjct 1019643 CCACCTCTCAAACGAAGAACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCC 1019702 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| || |||||||| || |||||| | ||||| || ||||| Sbjct 1019703 AAGGTACGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 1019762 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| ||| || | | || | ||||| | | || || Sbjct 1019763 ATACCTTCCTTGTCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACC 1019822 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | |||||| ||||| |||||||| Sbjct 1019823 TCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 1019869 >seq13 Length=24101694 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | ||| || || | || |||||||| || ||||||||||| | Sbjct 9157449 CCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGAATGTTGTAATCAGCC 9157508 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| |||||||| |||||||| || |||||| | ||||||||| ||||| Sbjct 9157509 AAGGTGCGGCCATCTTCGAGCTGTTTACCGGCGAAGATCAATCTTTGCTGATCCGGAGGA 9157568 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| || ||| || | | || | ||||| | | || || Sbjct 9157569 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGACC 9157628 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | ||||| || || | |||||| ||||| |||||||| Sbjct 9157629 TCAAGGGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 9157675 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| || | ||| || |||| || |||||||| || ||||||||||| | Sbjct 11436530 CCACCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCCGCC 11436471 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | || || || |||||||||||| |||||| | ||||||||| ||||| Sbjct 11436470 AAGGTACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAACCTTTGCTGATCCGGAGGG 11436411 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| || || | | || | ||||| | || || Sbjct 11436410 ATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCAGAACTCTCAACC 11436351 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | |||||| ||||| |||||||| Sbjct 11436350 TCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 11436304 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | ||| || || | || || || || || ||||||||||| Sbjct 970230 CCACCTCTTAAACGGAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCAACG 970289 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| || |||||||| || |||||| | ||||| || |||||| Sbjct 970290 AAGGTACGACCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGT 970349 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| || ||| || | | || | ||||| | | || || Sbjct 970350 ATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACC 970409 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | |||||| ||||| |||||||| Sbjct 970410 TCGAAAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 970456 >seq8 Length=27720346 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||| | ||| || || | || |||||||| || ||||||||||| | Sbjct 6052856 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATGTTGTAATCAGCC 6052915 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| || |||||||| ||| |||||| | ||||||||| ||||| Sbjct 6052916 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGGA 6052975 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| || || || | | || | ||||| | | || || Sbjct 6052976 ATGCCTTCCTTGTCCTGGATCTTAGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGACC 6053035 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | ||||| || || | |||||| ||||| |||||||| Sbjct 6053036 TCAAGGGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6053082 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||| || | ||| || |||| || |||||||| || ||||||||||| | Sbjct 8687691 CCACCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCCGCC 8687632 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | || || || |||||||||||| |||||| | ||||||||| ||||| Sbjct 8687631 AAGGTACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAACCTTTGCTGATCCGGAGGG 8687572 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| || || | | || | ||||| | || || Sbjct 8687571 ATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCAGAACTCTCAACC 8687512 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | |||||| ||||| |||||||| Sbjct 8687511 TCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 8687465 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| ||||| | ||| || || | || || || || || ||||||||||| | Sbjct 26612532 CCACCTCTCAAACGAAGAACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCC 26612473 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| || |||||||| || |||||| | ||||| || ||||| Sbjct 26612472 AAGGTACGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 26612413 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| || ||| || | | || | ||||| | | || || Sbjct 26612412 ATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCGATGGTGTCAGAGCTCTCAACC 26612353 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | |||||| ||||| |||||||| Sbjct 26612352 TCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 26612306 >seq14 Length=31758599 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| | | ||||| || ||||||| || || ||||| || |||||||||||| Sbjct 11737844 CCTCCCCTCAGACGCAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGCT 11737785 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || ||| |||||| || ||||| || ||| |||||||||| |||||||| || || Sbjct 11737784 AGCGTTCTCCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAGACGCTGCTGATCCGGTGGG 11737725 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| || || ||| | | || | |||||| | | || || Sbjct 11737724 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCAACC 11737665 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | |||||| || || | ||||| || || || ||||| Sbjct 11737664 TCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 11737618 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 6/123 (5%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAG- 143029 ||| || || |||| ||||| ||||| || |||||||| || ||| | | |||| Sbjct 16847582 CAAGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCTAAC---GTTCGACC 16847638 Query 143030 -TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||||||||||||||||||| |||||| | || ||||| || ||||| || ||||| Sbjct 16847639 ATCTTCGAGTTGTTTACCAGCAAAGATCAACCTCTGTTGATCAGGTGGTATCCCCTCTTT 16847698 Query 143089 GTC 143091 ||| Sbjct 16847699 GTC 16847701 >seq3 Length=28500605 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| | | ||||| || ||||||| || || ||||| || |||||||||||| Sbjct 10831928 CCTCCCCTCAGACGCAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGCT 10831869 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || ||| |||||| || ||||| || ||| |||||||||| |||||||| || || Sbjct 10831868 AGCGTTCTCCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAGACGCTGCTGATCCGGTGGG 10831809 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| || || ||| | | || | |||||| | | || || Sbjct 10831808 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCAACC 10831749 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | |||||| || || | ||||| || || || ||||| Sbjct 10831748 TCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 10831702 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 6/123 (5%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAG- 143029 ||| || || |||| ||||| ||||| || |||||||| || ||| | | |||| Sbjct 15299000 CAAGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCTAAC---GTTCGACC 15299056 Query 143030 -TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||||||||||||||||||| |||||| | || ||||| || ||||| || ||||| Sbjct 15299057 ATCTTCGAGTTGTTTACCAGCAAAGATCAACCTCTGTTGATCAGGTGGTATCCCCTCTTT 15299116 Query 143089 GTC 143091 ||| Sbjct 15299117 GTC 15299119 >seq17 Length=35492130 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| | | ||||| || ||||||| || || || || || |||||||||||| Sbjct 11454643 CCTCCCCTCAGACGCAGCACCAAATGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 11454584 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| ||| |||||| || ||||| || || |||||||||| |||||||| || || Sbjct 11454583 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGATCCGGTGGG 11454524 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| || || ||| | | || | |||||| | | || || Sbjct 11454523 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCAACC 11454464 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | |||||| || || | ||||| || || || ||||| Sbjct 11454463 TCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 11454417 >seq10 Length=25316904 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCT 143016 || || || | ||| | ||| | |||| || || ||||| || || |||||||| ||| Sbjct 18593279 CCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATATTGTAATCCGCT 18593338 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| |||||||||||||| |||||| |||| || | ||||| || || || Sbjct 18593339 AAA-GTGCGACCATCTTCGAGTTGTTTTCCAGCAAAGATTAGTCTCTGCTGGTCCGGTGG 18593397 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||||||||| ||| || || | | || | ||| || | | || || Sbjct 18593398 GATCCCTTCTTTGTCTTGAATCTTGGCCTTCACATTGTCAATCGTATCAGAGCTCTCGAC 18593457 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| ||||| || || || ||||| ||||| Sbjct 18593458 CTCTAGAGTGATGGTCTTGCCCGTCAAAGTCTTGACAAATATCTGCAT 18593505 >seq6 Length=26391736 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/122 (79%), Gaps = 4/122 (3%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGC-TCGAG 143029 ||| || | ||||| ||||| ||||| || ||||||||||| ||| | || | || | Sbjct 19297727 CAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCTAAG-GTCCGTCCA- 19297670 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||||||||| ||||||||| | ||||| | ||| ||||| || ||||| || |||||| Sbjct 19297669 TCTTCGAGTTGCTTACCAGCAAATATCAGCCTTTGTTGATCAGGTGGTATACCCTCTTTG 19297610 Query 143090 TC 143091 || Sbjct 19297609 TC 19297608 >seq5 Length=34971402 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/122 (79%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGC-TCGAG 143029 ||| || | ||||| ||||| ||||| || ||||||||||| ||| | || | || | Sbjct 7374553 CAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCTAAG-GTCCGTCCA- 7374610 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||||||||| ||||||||| | ||||| | ||| ||||| || ||||| || |||||| Sbjct 7374611 TCTTCGAGTTGCTTACCAGCAAATATCAGCCTTTGTTGATCCGGTGGTATACCCTCTTTG 7374670 Query 143090 TC 143091 || Sbjct 7374671 TC 7374672 >seq4 Length=30110606 Score = 86.0 bits (94), Expect = 6e-12 Identities = 93/121 (77%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGT 143030 ||| || | ||||| ||||| ||||| || ||||||||||| ||| | || | | Sbjct 23094916 CAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCTAAG-GTCCGGCCAT 23094858 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||||||||| ||||||||| | ||||| | ||| ||||| || ||||| || ||||||| Sbjct 23094857 CTTCGAGTTGCTTACCAGCAAATATCAGCCTTTGTTGATCAGGTGGTATACCCTCTTTGT 23094798 Query 143091 C 143091 | Sbjct 23094797 C 23094797 >seq11 Length=49703607 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCT 143016 || || || | ||| | ||| | |||| || || ||||| || || |||||||| ||| Sbjct 21795335 CCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATATTGTAATCCGCT 21795394 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| |||||||||||||| || ||| |||| || | ||||| || || || Sbjct 21795395 AAA-GTGCGACCATCTTCGAGTTGTTTTCCGGCAAAGATTAGTCTCTGCTGGTCCGGTGG 21795453 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||||||||| ||| || || | | || | ||| || | | || || Sbjct 21795454 GATCCCTTCTTTGTCTTGAATCTTGGCCTTCACATTGTCAATCGTATCAGAGCTCTCGAC 21795513 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| ||||| || || || ||||| ||||| Sbjct 21795514 CTCTAGAGTGATGGTCTTGCCCGTCAAAGTCTTGACAAATATCTGCAT 21795561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506778562251840