Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq12 111 1e-19 seq11 111 1e-19 seq10 107 1e-18 seq13 104 2e-17 seq8 102 6e-17 seq20 96.9 3e-15 seq14 91.5 1e-13 seq3 91.5 1e-13 seq17 86.0 5e-12 >seq12 Length=33044737 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-G 15193 |||||||||||| | | ||| ||||| || || || ||||| || ||||| ||||| | Sbjct 24357907 TGCCACCTCTCAGACGAAGAACCAAATGCAGAGTTGACTCTTTCTGGATGTTATAATCTG 24357966 Query 15194 CTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTT 15253 || || ||| | || || | ||| ||||||||| | || | | |||||||| Sbjct 24357967 CTAAG-GTTCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCAGGA 24358025 Query 15254 GGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 || || ||||| ||||| ||| || ||| ||| | || ||||| || |||| Sbjct 24358026 GGTATCCCTTCCTTGTCTTGAATCTTCGCCTTGACATTGTCAATGGTGTCAGAGCTTTCA 24358085 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| ||||||||||| || || || ||||| ||||| |||||||| Sbjct 24358086 ACTTCTAGAGTAATGGTTTTTCCGGTGAGGGTTTTCACAAATATTTGCAT 24358135 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| || | ||| || || || || || || || || || ||||| || Sbjct 24358365 CCACCTCTCAACCTAAGAACCAAGTGGAGTGTTGACTCCTTCTGGATATTGTAGTCCGCA 24358424 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || | ||| ||||||||| | || | | || ||||| || Sbjct 24358425 AGCGTACGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCTGGAGGG 24358484 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| |||||| ||| || | || ||||| ||| |||| || Sbjct 24358485 ATACCTTCCTTGTCCTGGATTTTGGCCTTGACGTTATCGATGGTGTCGGAGCTTTCAACC 24358544 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||| ||||| ||||| || ||||| || ||||| ||||||||| Sbjct 24358545 TCAAGGGTTATGGTCTTACCAGTAAGAGTCTTAACAAAGATTTGCATA 24358592 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || ||||| || || |||||||| || | | | | ||||| | |||| Sbjct 24357477 TGAAGAGTTGACTCTTTCTGAATATTGTAATCCGCTAAAGTGCGACCATCTTCGAGTTGT 24357536 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | || | | || ||||| ||| || ||||||||||| ||| ||| Sbjct 24357537 TTTCCGGCAAAGATTAGTCTCTGCTGGTCCGGTGGGATCCCTTCTTTGTCTTGAATCTTG 24357596 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || ||||| | || || |||| || ||||| || || ||| Sbjct 24357597 GCCTTCACATTGTCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTCTTGCCCGTC 24357656 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | ||| || |||||||| ||||| Sbjct 24357657 AAAGTCTTGACAAAAATCTGCAT 24357679 >seq11 Length=49703607 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-G 15193 |||||||||||| | | ||| ||||| || || || |||| || ||||| ||||| | Sbjct 21795789 TGCCACCTCTCAGACGAAGAACCAAATGCAGAGTTGACCCTTTCTGGATGTTATAATCTG 21795848 Query 15194 CTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTT 15253 || || ||| | || || | ||| ||||||||| | || | | |||||||| Sbjct 21795849 CTAAG-GTTCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGA 21795907 Query 15254 GGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 || |||||||| ||||| || || ||| ||| | || ||||| || |||| Sbjct 21795908 GGGATTCCTTCCTTGTCTTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAGCTTTCA 21795967 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| ||||||||||| || || || ||||||||||| |||||||| Sbjct 21795968 ACTTCTAGAGTAATGGTTTTTCCGGTGAGGGTTTTTACAAATATTTGCAT 21796017 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||||||||| || | ||| || || || || || || || || || ||||||||| Sbjct 21796017 TGCCACCTCTCAACCTAAGAACCAAGTGTAGTGTTGACTCCTTCTGGATATTGTAATCGG 21796076 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || | | | || || | ||||| || || | || | | || ||||| | Sbjct 21796077 CAAGCGTACGACCATCCTCAAGCTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGAG 21796136 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || ||||| ||||| || ||| ||| || | || || || ||| |||| | Sbjct 21796137 GGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTTTCAA 21796196 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || | ||| ||||| ||||| || ||||| || ||||| ||||||||| Sbjct 21796197 CCTCAAGGGTTATGGTCTTACCAGTAAGAGTCTTAACAAAGATTTGCATA 21796246 >seq10 Length=25316904 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||||| | | ||| ||||| || || || ||||| || ||||| ||||| Sbjct 18593733 TGCCGCCTCTCAGACGAAGAACCAAATGCAGAGTTGACTCTTTCTGGATGTTATAATCTG 18593792 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| ||| | || || | ||| ||||||||| | || | | |||||||| | Sbjct 18593793 CTAGGGTTCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAG 18593852 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | |||||||| ||||| || || ||| ||| | || ||||| || |||| | Sbjct 18593853 GGATTCCTTCCTTGTCTTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAGCTTTCAA 18593912 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | |||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 18593913 CTTCTAGAGTAATAGTTTTTCCGGTGAGGGTTTTTACAAATATTTGCAT 18593961 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| || | ||| || || || || || || || ||||| ||||| ||| Sbjct 18594191 CCACCTCTCAACCTAAGAACCAAGTGGAGTGTTGACTCCTTCTGTATATTGTAGTCGGCA 18594250 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || | ||| ||||||||| | || | | || ||||| || Sbjct 18594251 AGCGTACGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCTGGAGGG 18594310 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||| ||||| || ||| ||| || | || ||||| ||| |||| || Sbjct 18594311 ATTCCTTCCTTGTCTTGGATCTTGGCCTTAACGTTATCGATGGTGTCGGAGCTTTCAACC 18594370 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||| ||||| ||||| || ||||| || ||||| ||||| ||| Sbjct 18594371 TCAAGGGTTATGGTCTTACCAGTAAGAGTCTTAACAAAGATTTGTATA 18594418 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || ||||| || || |||||||| || | | | | ||||| | |||| Sbjct 18593303 TGAAGAGTTGACTCTTTCTGAATATTGTAATCCGCTAAAGTGCGACCATCTTCGAGTTGT 18593362 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | || | | || ||||| ||| || ||||||||||| ||| ||| Sbjct 18593363 TTTCCAGCAAAGATTAGTCTCTGCTGGTCCGGTGGGATCCCTTCTTTGTCTTGAATCTTG 18593422 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || ||||| | || || |||| || ||||| || || ||| Sbjct 18593423 GCCTTCACATTGTCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTCTTGCCCGTC 18593482 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | ||| || ||||| || ||||| Sbjct 18593483 AAAGTCTTGACAAATATCTGCAT 18593505 >seq13 Length=24101694 Score = 104 bits (114), Expect = 2e-17 Identities = 172/242 (71%), Gaps = 5/242 (2%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195 |||||||| || | | ||| || || ||||| || ||||| || ||||||||||| || Sbjct 9157449 CCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGAATGTTGTAATCAGCC 9157508 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | ||||| | ||||| || ||| | ||||| | ||| || || || Sbjct 9157509 AAGG-TGCGGCCATCTTCGAGCTGTTTACCGGCGAAGATCAATCTTTGCTGATCCGGAGG 9157567 Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 ||| ||||| ||||| || ||||| ||| ||| | || ||||| ||| | || | Sbjct 9157568 AATGCCTTCCTTGTCCTGGATCTTTGC-CTTAACATTGTCGATGGTGTCGGAGCTCTCGA 9157626 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374 | || | ||| ||||| ||||| || || ||||| || ||||||||||| | ||||| | Sbjct 9157627 CCTCAAGGGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT-CTGGAAAAGA 9157685 Query 15375 AA 15376 || Sbjct 9157686 AA 9157687 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195 |||||||| |||| | ||| || |||||||| || ||||| || ||||||||||| || Sbjct 11436530 CCACCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCCGCC 11436471 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | || |||| ||||| ||||| | ||||| | ||| || || || Sbjct 11436470 AAGG-TACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAACCTTTGCTGATCCGGAGG 11436412 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| ||||| ||| || ||| ||| | || ||||| || | | || || Sbjct 11436411 GATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCAGAACTCTCAAC 11436352 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | |||||||| || || || || ||||| || ||||||||||| Sbjct 11436351 CTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 11436304 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCG- 15206 |||| || || ||||| || || || || || |||||||| || || ||| || Sbjct 3264438 CTTAGCACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCAGCC---AATGTGCGA 3264494 Query 15207 -CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCT 15265 | || || | |||||||||||| | || | |||||| ||||| || || ||||| Sbjct 3264495 CCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCC 3264554 Query 15266 TTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTA 15325 ||||| ||||| ||| ||| | || ||||| ||| | || || || | ||| Sbjct 3264555 TTGTCCTGGATTTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCGAGGGTG 3264614 Query 15326 ATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || ||||| ||||| || || ||||| |||||| Sbjct 3264615 ATGGTCTTGCCTGTGAGAGTCTTGACGAAAATCTGCATA 3264653 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||||||||||||||| || || ||||| || || ||| |||| |||||| Sbjct 969791 ACCAAATGAAGGGTGGAATCCTTCTGGATGTTTTAGTCAGCAAGAGTTCTTCAGTCTTCA 969850 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || |||||| |||| | | || ||||| |||||||| |||| || Sbjct 969851 AGCTGCTTACCAGCGAATATGAGTCTCTGCTGGTCCGGGGGAATTCCCTCTTCATCTTGG 969910 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || ||| | || || || || | || || || | ||| ||||| || Sbjct 969911 ATATTGGCTTTTGACATTGTCGATTGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTCTT 969970 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| ||| || ||||| || |||||| Sbjct 969971 GCCAGTCAAAGTCTTGACAAAGATCTGCATA 970001 >seq8 Length=27720346 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195 |||||||| |||| | ||| || |||||||| || ||||| || ||||||||||| || Sbjct 8687691 CCACCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCCGCC 8687632 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | || |||| ||||| ||||| | ||||| | ||| || || || Sbjct 8687631 AAGG-TACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAACCTTTGCTGATCCGGAGG 8687573 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| ||||| ||| || ||| ||| | || ||||| || | | || || Sbjct 8687572 GATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCAGAACTCTCAAC 8687513 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | |||||||| || || || || ||||| || ||||||||||| Sbjct 8687512 CTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 8687465 Score = 96.9 bits (106), Expect = 3e-15 Identities = 171/243 (70%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195 ||||||||||| | | ||| || || ||||| || || || || ||||||||||| || Sbjct 26612532 CCACCTCTCAAACGAAGAACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCC 26612473 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | ||||| | ||||| || ||| | ||||| | || ||||| || Sbjct 26612472 AAGG-TACGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGG 26612414 Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 ||| ||||| ||||| || ||||| ||| ||| | || ||||| || | || | Sbjct 26612413 AATGCCTTCCTTGTCCTGGATCTTTGC-CTTGACATTGTCGATGGTGTCAGAGCTCTCAA 26612355 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374 | || | |||||||| || || || || ||||| || ||||||||||| | | ||||| Sbjct 26612354 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCATCTGAG-AAATA 26612296 Query 15375 AAA 15377 ||| Sbjct 26612295 AAA 26612293 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195 |||||||| || | | ||| || || ||||| || ||||| || ||||||||||| || Sbjct 6052856 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATGTTGTAATCAGCC 6052915 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | ||||| | ||||| || || | ||||| | ||| || || || Sbjct 6052916 AAGG-TGCGGCCATCTTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGG 6052974 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||| ||||| ||||| || || ||| ||| | || ||||| ||| | || || Sbjct 6052975 AATGCCTTCCTTGTCCTGGATCTTAGCCTTAACATTGTCGATGGTGTCGGAGCTCTCGAC 6053034 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | ||| ||||| ||||| || || ||||| || ||||||||||| Sbjct 6053035 CTCAAGGGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6053082 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || ||||| ||||||||||| ||| | | | ||||| | || Sbjct 26612964 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGCTAGGGTGCGTCCATCTTCGAGCTGC 26612905 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | || | | || ||||| ||| || ||||| ||||| ||| ||| Sbjct 26612904 TTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTG 26612845 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 || ||| | || || || || | || || || | ||| |||||||| || ||| Sbjct 26612844 GCTTTGACATTGTCAATTGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTTTTGCCAGTC 26612785 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 | ||| || ||||| ||||||||| Sbjct 26612784 AAAGTCTTGACAAAGATTTGCATA 26612761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||| || || || || || ||||||||||| ||| | | | || || Sbjct 8688586 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGACCATCCTC 8688527 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||| |||||| | || | | |||||||| || || ||||| || || Sbjct 8688526 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTATCCTG 8688467 Query 15274 AAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 ||| ||||| ||| || | || || || || | ||||| || ||||| || || | Sbjct 8688466 AATCTTTGC-CTTGACGTTATCGATTGTGTCTGAGCTCTCTACCTCCAAGGTGATAGTCT 8688408 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | ||||||| |||||| ||||| ||||||||| Sbjct 8688407 TCCCTGTCAAAGTTTTCACAAAGATTTGCATA 8688376 >seq20 Length=30099736 Score = 96.9 bits (106), Expect = 3e-15 Identities = 171/243 (70%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195 ||||||||||| | | ||| || || ||||| || || || || ||||||||||| || Sbjct 1019643 CCACCTCTCAAACGAAGAACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCC 1019702 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | ||||| | ||||| || ||| | ||||| | || ||||| || Sbjct 1019703 AAGG-TACGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGG 1019761 Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 ||| ||||| ||||| ||| ||||| ||| ||| | || ||||| || | || | Sbjct 1019762 AATACCTTCCTTGTCCTGAATCTTTGC-CTTGACATTGTCGATGGTGTCAGAGCTCTCAA 1019820 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374 | || | || ||||| || || || || ||||| || ||||||||||| | |||||| Sbjct 1019821 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT-CTGAAAAATA 1019879 Query 15375 AAA 15377 ||| Sbjct 1019880 AAA 1019882 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || || || || ||||| ||||||||||| ||| | | | || || | || Sbjct 14740321 ATGGAGAGTCGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTCAAGCTG 14740262 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| |||||| | || | | |||||||| |||||| ||||| ||||| ||| || Sbjct 14740261 TTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATCCCTTCCTTGTCCTGAATCTT 14740202 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| | || || || ||| | || || || || || || || || ||||| Sbjct 14740201 GGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAACGTGATAGTCTTCCCTGT 14740142 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || |||||| ||||| ||||||||| Sbjct 14740141 CAAAGTTTTCACAAAGATTTGCATA 14740117 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195 |||||||| || | | ||| || ||||| || || ||||| || ||||||||||| || Sbjct 14739660 CCACCTCTTAAACGAAGAACCAAGTGAAGTGTTGATTCTTTCTGGATGTTGTAATCTGCC 14739601 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 || | | | || |||| ||||| ||||| | ||||| | ||| || || || Sbjct 14739600 AAGG-TACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAATCTTTGCTGATCCGGAGG 14739542 Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 ||| ||||| ||||| || ||||| ||| ||| | || ||||| || | || | Sbjct 14739541 AATCCCTTCCTTGTCCTGGATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAA 14739483 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || | |||||||| || || || || ||||| || ||||||||||| Sbjct 14739482 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 14739434 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || || ||||| || || || || || |||||||| || | | | || ||||| Sbjct 5698957 AAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTGCCGTCT 5698898 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||| || || ||| | ||||| | || ||||| ||| || || ||||| || Sbjct 5698897 TCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTATCT 5698838 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| ||| | || ||||| ||| | || || || | || ||||| Sbjct 5698837 TGGATCTTGGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGTGTGATGGTC 5698778 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| || || |||||||||||| Sbjct 5698777 TTCCCGGTGAGAGTCTTGACGAAAATTTGCATA 5698745 >seq14 Length=31758599 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || |||||||| || || ||||| || |||||||||||| ||| ||||| ||||||| Sbjct 11737826 ACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGCTAGCGTTCTCCCGTCTTCC 11737767 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || || | |||| ||| || || || ||| || ||||| ||||| Sbjct 11737766 AGCTGTTTCCCGGCAAAGATCAGACGCTGCTGATCCGGTGGGATCCCTTCCTTGTCTTGG 11737707 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || ||| | || || || || || || |||| || || || || Sbjct 11737706 ATCTTCGCT-TTCACATTGTCGATCGTGTCTGATGACTCAACCTCTAGTGTTATCGTCTT 11737648 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || || || ||||| ||||| || ||||| ||| Sbjct 11737647 CCCCGTTAGGGTTTTCACAAAGATCTGCATTTTT 11737614 >seq3 Length=28500605 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || |||||||| || || ||||| || |||||||||||| ||| ||||| ||||||| Sbjct 10831910 ACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGCTAGCGTTCTCCCGTCTTCC 10831851 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || || | |||| ||| || || || ||| || ||||| ||||| Sbjct 10831850 AGCTGTTTCCCGGCAAAGATCAGACGCTGCTGATCCGGTGGGATCCCTTCCTTGTCTTGG 10831791 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || ||| | || || || || || || |||| || || || || Sbjct 10831790 ATCTTCGCT-TTCACATTGTCGATCGTGTCTGATGACTCAACCTCTAGTGTTATCGTCTT 10831732 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || || || ||||| ||||| || ||||| ||| Sbjct 10831731 CCCCGTTAGGGTTTTCACAAAGATCTGCATTTTT 10831698 >seq17 Length=35492130 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || |||||||| || || || || || |||||||||||| || ||||| ||||||| Sbjct 11454625 ACCAAATGAAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGTGTTCTCCCGTCTTCC 11454566 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || ||| | |||| ||| || || || ||| || ||||| ||||| Sbjct 11454565 AGCTGTTTCCCGGCGAAGATCAGACGCTGCTGATCCGGTGGGATCCCTTCCTTGTCTTGG 11454506 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || ||| | || || || || || || |||| || || || || Sbjct 11454505 ATCTTCGCT-TTCACATTGTCGATCGTGTCTGATGACTCAACCTCTAGTGTTATCGTCTT 11454447 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || || || ||||| ||||| || ||||| ||| Sbjct 11454446 CCCCGTTAGGGTTTTCACAAAGATCTGCATTTTT 11454413 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| | | |||||||| | || || || || || ||||||||||| Sbjct 33393496 CCACCTCTCAGACGAAGCACTAAATGCAAAGTTGACTCCTTCTGGATGTTGTAATCAGCA 33393437 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | || |||||||| | || | | ||||| || || Sbjct 33393436 AGAGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATTAGTCTCTGTTGATCCGGAGGG 33393377 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| ||||| || || ||| || ||| | || ||||| || | | || || Sbjct 33393376 ATGCCTTCCTTGTCCTGGATCTTAGCT-TTAACATTGTCGATGGTGTCTGAACTCTCAAC 33393318 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||||||||||||||| || || || || || || || |||||| Sbjct 33393317 TTCTAGGGTAATGGTTTTACCGGTTAGGGTCTTGACGAATATCTGCATA 33393269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362014944036492