Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq17 125 4e-24 seq16 120 2e-22 seq5 120 2e-22 seq12 116 2e-21 seq11 116 2e-21 seq7 116 2e-21 seq3 116 2e-21 seq2 116 2e-21 seq19 113 2e-20 seq18 113 2e-20 seq1 113 2e-20 seq334 109 3e-19 seq15 109 3e-19 seq10 109 3e-19 seq20 105 3e-18 seq14 105 3e-18 seq9 105 3e-18 seq13 104 1e-17 seq8 104 1e-17 seq4 102 4e-17 seq6061 98.7 5e-16 >seq17 Length=35492130 Score = 125 bits (138), Expect = 4e-24 Identities = 87/97 (90%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||||| |||||||| |||||||||||| | | |||||||| ||||||||||||||||| Sbjct 2571311 AATTA-TAAAAAAT--AATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTA 2571255 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 |||||||||||| |||||||||||||||||||| ||| Sbjct 2571254 GCACGACGCTCTAACCAACTGAGCTAATGGGCCTTCG 2571218 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 6072222 AAAGTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 6072281 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 6072282 CAACTGAGCTAATGGGCC 6072299 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 17486417 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 17486358 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 17486357 CAACTGAGCTAATAGGCC 17486340 >seq16 Length=29110212 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| || ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 15680787 TAAAAAATAAA--TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGA 15680844 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||| |||||||||||||||||||||| Sbjct 15680845 CGCTCTAACCAACTGAGCTAATGGGCCGT 15680873 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 16109511 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 16109452 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 16109451 CAACTGAGCTAATAGGCC 16109434 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 22490450 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 22490509 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 22490510 CAACTGAGCTAATAGGCC 22490527 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 22576780 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 22576721 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 22576720 CAACTGAGCTAATAGGCC 22576703 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | | |||||| || |||||||||||||||||||| ||||||| || Sbjct 22578110 AAAGTGGCCTATACAGGTATCGAATCTGTGACCTTCGCGTTATTAGCACAACGCTCTAAC 22578051 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 22578050 CAACTGAGCTAATAGGCC 22578033 >seq5 Length=34971402 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| || ||||||||| | | |||||||| |||||||||||||||||||||| Sbjct 30558635 ATAAAAAAAATAAGTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACG 30558576 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||| |||||||||||||||||||||| Sbjct 30558575 ACGCTCTAACCAACTGAGCTAATGGGCCGT 30558546 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 30820637 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 30820578 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 30820577 CAACTGAGCTAATAGGCC 30820560 >seq12 Length=33044737 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 30777970 AAATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 30778029 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 30778030 CAACTGAGCTAATGGGCC 30778047 Score = 111 bits (122), Expect = 8e-20 Identities = 81/95 (85%), Gaps = 6/95 (6%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATT------GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 || |||||| |||||| |||||||| | | |||||||| ||||||||||||||| Sbjct 990110 AAAAAAAAAACAAATTTTAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTAT 990169 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||||||||| Sbjct 990170 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 990204 Score = 100 bits (110), Expect = 1e-16 Identities = 78/93 (84%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11439 TTAATAAAA--AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| ||||| || ||| ||||| || | |||||||||| |||||||||||||||| Sbjct 7754425 TTATTAAAACCAAAAAAAATGGCCTATACAGAGATCGAACCTGTGACCTTCGCGTTATTA 7754366 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 7754365 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 7754333 >seq11 Length=49703607 Score = 116 bits (128), Expect = 2e-21 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| || ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 1010816 AAAAAATTGAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 1010757 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 1010756 GCTCTAACCAACTGAGCTAATGGGCC 1010731 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 43559573 AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 43559514 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 43559513 CAACTGAGCTAATGGGCC 43559496 Score = 109 bits (120), Expect = 3e-19 Identities = 77/88 (88%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||||| | ||||||||| | | | |||||| |||||||||||||||||||||| Sbjct 49417593 ATAAAAAATGA---TGGCCCATGCAGGTTTTGAACCTGCGACCTTCGCGTTATTAGCACG 49417649 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 49417650 ACGCTCTAACCAACTGAGCTAATGGGCC 49417677 Score = 105 bits (116), Expect = 3e-18 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 11448 AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507 ||| ||| ||||| || | ||||||||||| ||||||||||||||||||||||||||| Sbjct 8035402 AATTAAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTC 8035343 Query 11508 TRACCAACTGAGCTAATGGGCC 11529 | ||||||||||||||| |||| Sbjct 8035342 TAACCAACTGAGCTAATAGGCC 8035321 Score = 98.7 bits (108), Expect = 5e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||| |||||||||||| |||| | Sbjct 25825327 AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGATATTAGCACGACACTCTAGC 25825268 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 25825267 CAACTGAGCTAATGGGCC 25825250 >seq7 Length=33617777 Score = 116 bits (128), Expect = 2e-21 Identities = 78/87 (90%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| || ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 18927200 AAAAATAAA--TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 18927257 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGT 11531 |||| |||||||||||||||||||||| Sbjct 18927258 CTCTAACCAACTGAGCTAATGGGCCGT 18927284 Score = 105 bits (116), Expect = 3e-18 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||| || ||| ||||| || | ||||||||||| |||||||||||||||||||||||| Sbjct 26731596 AAACATAAAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACG 26731537 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||| |||| Sbjct 26731536 CTCTAACCAACTGAGCTAATAGGCC 26731512 Score = 104 bits (114), Expect = 1e-17 Identities = 79/93 (85%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCA--AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||| || |||| | || ||||| || | ||||||||||| |||||||||||||||| Sbjct 26642283 TTAAAAACAAATTATAAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTA 26642342 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 26642343 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 26642375 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 19278424 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 19278365 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 19278364 CAACTGAGCTAATAGGCC 19278347 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 26733418 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 26733359 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 26733358 CAACTGAGCTAATAGGCC 26733341 >seq3 Length=28500605 Score = 116 bits (128), Expect = 2e-21 Identities = 85/97 (88%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||||| |||| ||| ||||||||||| | | |||||||| ||||||||||||||||| Sbjct 2662600 AATTA-TAAAGAAT--AATTGGCCCATACAGGTGTCGAACCTGCGACCTTCGCGTTATTA 2662544 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 |||||||||||| |||||||||||||||||||| ||| Sbjct 2662543 GCACGACGCTCTAACCAACTGAGCTAATGGGCCTTCG 2662507 Score = 104 bits (114), Expect = 1e-17 Identities = 78/92 (85%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATC---AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||||||| || ||| ||||| || | ||||||||||| ||||||||||||||||| Sbjct 15067947 AATAAAAGATTTTAAAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAG 15067888 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| ||||||||||||||| |||| Sbjct 15067887 CACGACGCTCTAACCAACTGAGCTAATAGGCC 15067856 >seq2 Length=29139806 Score = 116 bits (128), Expect = 2e-21 Identities = 81/93 (87%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| |||| || | ||| ||||||||| | | |||||||| ||||||||||||||||| Sbjct 22523304 AATAAATACAACAAAAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTA 22523245 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 22523244 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 22523212 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 28827849 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 28827908 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 28827909 TGAGCTAATGGGCC 28827922 >seq19 Length=26736940 Score = 113 bits (124), Expect = 2e-20 Identities = 81/93 (87%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| ||| | ||| ||| ||||||||| | | |||||||| ||||||||||||||||| Sbjct 456823 AATAAATTACAAA--AAAGTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTA 456766 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 456765 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 456733 Score = 109 bits (120), Expect = 3e-19 Identities = 80/93 (86%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| ||| | ||| ||| ||||||||| | | |||||| | ||||||||||||||||| Sbjct 456323 AATAAATTACAAA--AAAGTGGCCCATGCAGGTTTCGAACTTGCGACCTTCGCGTTATTA 456266 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 456265 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 456233 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 24502141 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 24502082 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 24502081 TGAGCTAATGGGCC 24502068 >seq18 Length=20869551 Score = 113 bits (124), Expect = 2e-20 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| | ||| ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 20610471 AAAATAAAAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 20610530 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 20610531 GCTCTAACCAACTGAGCTAATGGGCC 20610556 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct 14768727 AAAATGGCCCATGCAGATTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 14768668 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 14768667 CAACTGAGCTAATGGGCC 14768650 >seq1 Length=23241285 Score = 113 bits (124), Expect = 2e-20 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11451 CAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| | Sbjct 19898521 CAAAGTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAA 19898580 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| Sbjct 19898581 CCAACTGAGCTAATGGGCC 19898599 Score = 100 bits (110), Expect = 1e-16 Identities = 81/98 (83%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 11432 TATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 |||| || | || ||||| | ||||||||| | | |||||||| ||||||| |||| Sbjct 390524 TATATAAAAATTACAAAATAA---TGGCCCATGCAGGTTTCGAACCTGCGACCTTTGCGT 390468 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||| |||||||||||||||||||| Sbjct 390467 GATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 390430 >seq334 Length=10587 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 10163 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 10104 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 10103 TGAGCTAATGGGCC 10090 >seq15 Length=30521352 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 346404 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 346345 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 346344 TGAGCTAATGGGCC 346331 Score = 109 bits (120), Expect = 3e-19 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11451 CAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| | | |||||||| ||||||||||||||||||||| ||||||| | Sbjct 26622084 CAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACAACGCTCTAA 26622025 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| Sbjct 26622024 CCAACTGAGCTAATGGGCC 26622006 >seq10 Length=25316904 Score = 109 bits (120), Expect = 3e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 896433 AAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 896374 Query 11513 AACTGAGCTAATGGGCC 11529 ||||||||||||||||| Sbjct 896373 AACTGAGCTAATGGGCC 896357 Score = 100 bits (110), Expect = 1e-16 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11451 CAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| | |||||||| ||||||||||||||||||||| ||||||| | Sbjct 21947551 CAAAATGGCCCATGCAGATTTCGAACCTGCGACCTTCGCGTTATTAGCACTACGCTCTAA 21947492 Query 11511 CCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||| Sbjct 21947491 CCAACTGAGCTAATAGGCC 21947473 Score = 98.7 bits (108), Expect = 5e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| |||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 6892084 AAAATGGCTTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 6892025 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 6892024 CAACTGAGCTAATAGGCC 6892007 >seq20 Length=30099736 Score = 105 bits (116), Expect = 3e-18 Identities = 77/89 (87%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| ||| ||||| || | ||||||||||| |||||||||||||||||||| Sbjct 7209253 AATAAAAAA--AAACTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCAC 7209196 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||| |||||||||| |||| Sbjct 7209195 GACGCTCTAACCAGCTGAGCTAATAGGCC 7209167 Score = 105 bits (116), Expect = 3e-18 Identities = 79/92 (86%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||||| || || |||| ||||| || | ||||||||||| ||||||||||||||||| Sbjct 13221364 TTAATTAACAAAAAAATATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAG 13221305 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| ||||||||||||||| |||| Sbjct 13221304 CACGACGCTCTAACCAACTGAGCTAATAGGCC 13221273 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 7209384 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 7209325 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 7209324 CAACTGAGCTAATAGGCC 7209307 >seq14 Length=31758599 Score = 105 bits (116), Expect = 3e-18 Identities = 80/94 (85%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||||||| ||| |||||||||||| | | |||||||| | | |||||||||||||||| Sbjct 2684449 TAATAAAGAAT--AATTGGCCCATGCAGGTTTCGAACCTGCTATCTTCGCGTTATTAGCA 2684392 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 ||||||||| || ||||||||||||| ||| ||| Sbjct 2684391 CGACGCTCTAACTAACTGAGCTAATGAGCCTTCG 2684358 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 16466862 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 16466921 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 16466922 CAACTGAGCTAATAGGCC 16466939 Score = 93.3 bits (102), Expect = 2e-14 Identities = 74/87 (85%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||||||||| ||| | | |||||||| |||||||||||||||||||| ||||| || Sbjct 6314912 AAATTGGCC-ATGGAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCA----GCTCTAAC 6314966 Query 11512 CAACTGAGCTAATGGGCCGTCGACGAT 11538 |||||||||||||||||| | |||||| Sbjct 6314967 CAACTGAGCTAATGGGCC-TTGACGAT 6314992 >seq9 Length=38094978 Score = 105 bits (116), Expect = 3e-18 Identities = 80/94 (85%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 11437 AATTAATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 |||||| |||| | ||| ||||| || | ||||||||||| ||||||||||||||| Sbjct 3184878 AATTAAAAAAACTAAAAAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATT 3184937 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| ||||||||||||||| |||| Sbjct 3184938 AGCACGACGCTCTAACCAACTGAGCTAATAGGCC 3184971 Score = 104 bits (114), Expect = 1e-17 Identities = 76/88 (86%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||| ||| ||||| || | ||||||||||| ||||||||||||||||||||| Sbjct 32503490 AAAAAATAAAAAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACG 32503549 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| ||||||||||||||| |||| Sbjct 32503550 ACGCTCTAACCAACTGAGCTAATAGGCC 32503577 Score = 104 bits (114), Expect = 1e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 32592161 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 32592102 Query 11512 CAACTGAGCTAATGGGCCGTC 11532 ||||||||||||| |||| || Sbjct 32592101 CAACTGAGCTAATAGGCCATC 32592081 Score = 100 bits (110), Expect = 1e-16 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 || ||||||| ||| ||||| || | || |||||||| |||||||||||||||||| Sbjct 32595060 AAGAAAAAATTAAAAAGTGGCCTATACAGGGGTCGAACCTGTGACCTTCGCGTTATTAGC 32595001 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| ||||||||||||||| |||| Sbjct 32595000 ACGACGCTCTAACCAACTGAGCTAATAGGCC 32594970 Score = 100 bits (110), Expect = 1e-16 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 || ||||||| ||| ||||| || | || |||||||| |||||||||||||||||| Sbjct 32596027 AAGAAAAAATTAAAAAGTGGCCTATACAGGGGTCGAACCTGTGACCTTCGCGTTATTAGC 32595968 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| ||||||||||||||| |||| Sbjct 32595967 ACGACGCTCTAACCAACTGAGCTAATAGGCC 32595937 >seq13 Length=24101694 Score = 104 bits (114), Expect = 1e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 6760475 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 6760416 Query 11512 CAACTGAGCTAATGGGCCG 11530 ||||||||||||| ||||| Sbjct 6760415 CAACTGAGCTAATAGGCCG 6760397 Score = 95.1 bits (104), Expect = 6e-15 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||| || | ||||||||||| |||||||||||||||||||||||||||| |||| | Sbjct 6760331 TGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 6760272 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 6760271 TGAGCTAATAGGCC 6760258 Score = 84.2 bits (92), Expect = 1e-11 Identities = 77/100 (77%), Gaps = 11/100 (11%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCT-----------TCGC 11489 |||||| ||| ||| |||| || | ||||||||||| ||||| |||| Sbjct 10605878 AATAAACAATAAAAATGGCTTATACAGGGATCGAACCTGTGACCTACCTGTGACCTTCGC 10605819 Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| ||||||||||||||| |||| Sbjct 10605818 GTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 10605779 >seq8 Length=27720346 Score = 104 bits (114), Expect = 1e-17 Identities = 78/92 (85%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||| || |||| || ||||| || | ||||||||||| ||||||||||||||||| Sbjct 3041977 ATTATTATAAAA---AAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAG 3041921 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| ||||||||||||||| |||| Sbjct 3041920 CACGACGCTCTAACCAACTGAGCTAATAGGCC 3041889 Score = 100 bits (110), Expect = 1e-16 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||| || ||| ||||| || | ||||||||||| |||||||||||||||||||| Sbjct 7587710 AAAAAATAACAAAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCAC 7587651 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||| ||||||||||||||| |||| Sbjct 7587650 GACGATCTAACCAACTGAGCTAATAGGCC 7587622 Score = 98.7 bits (108), Expect = 5e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 3041827 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 3041768 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 3041767 CAGCTGAGCTAATAGGCC 3041750 >seq4 Length=30110606 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 4070767 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 4070708 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 4070707 CAACTGAGCTAATAGGCC 4070690 >seq6061 Length=495 Score = 98.7 bits (108), Expect = 5e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||| |||||||||||| |||| | Sbjct 309 AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGATATTAGCACGACACTCTAGC 368 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 369 CAACTGAGCTAATGGGCC 386 Lambda K H 0.638 0.409 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261372608184112