Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq11 165 1e-36 seq18 161 2e-35 seq2 161 2e-35 seq5 150 3e-32 seq14 149 1e-31 seq3 149 1e-31 seq17 145 1e-30 seq9 143 4e-30 seq6 143 4e-30 seq7 140 5e-29 seq4 138 2e-28 seq16 84.2 3e-12 >seq11 Length=49703607 Score = 165 bits (182), Expect = 1e-36 Identities = 156/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||||| | |||||||| | ||||| | Sbjct 45445547 GAGACAACATCCAAGGAATCACCAAGCCTGCGATCCGGAGGTTGGCTCGTAGAGGTGGTG 45445606 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | |||| ||||||| ||||| ||| | |||||||| | Sbjct 45445607 TCAAGCGTATCAGTGGTCTCATCTACGAAGAGACTCGTGGTGTCCTCAAGATCTTTTTGG 45445666 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||| ||| | ||| ||||||||||||| | |||||||||||| Sbjct 45445667 AGAACGTGATCCGTGACGCTGTTACCTACACCGAGCACGCTAGGAGGAAGACTGTCACCG 45445726 Query 16638 CCATGGATATCGTCTATGC 16656 |||||||| ||||||| || Sbjct 45445727 CCATGGATGTCGTCTACGC 45445745 Score = 161 bits (178), Expect = 2e-35 Identities = 155/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||||| | |||||||| | ||||||| Sbjct 45589990 GAGACAACATCCAAGGAATCACCAAGCCGGCGATCCGAAGGTTGGCTCGTAGAGGTGGAG 45589931 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | |||| ||||||| |||| || | |||||||| | Sbjct 45589930 TCAAGCGTATCAGTGGTCTCATCTACGAAGAGACACGTGGAGTCCTCAAGATCTTTTTGG 45589871 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||| ||| | ||| ||||||||||||| | |||||||||||| Sbjct 45589870 AGAACGTGATCCGTGACGCTGTTACCTACACCGAGCACGCTAGGAGGAAGACTGTCACCG 45589811 Query 16638 CCATGGATATCGTCTATGC 16656 |||||||| ||||||| || Sbjct 45589810 CCATGGATGTCGTCTACGC 45589792 >seq18 Length=20869551 Score = 161 bits (178), Expect = 2e-35 Identities = 181/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||||| | |||||||| | ||||| | Sbjct 16772896 GAGACAACATCCAAGGAATCACCAAGCCTGCGATCCGGAGGTTGGCTCGTAGAGGTGGTG 16772837 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | |||| || |||| ||||| ||| | |||||||| | Sbjct 16772836 TCAAGCGTATCAGTGGTCTCATCTACGAGGAGACTCGTGGTGTCCTCAAGATCTTTTTGG 16772777 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||| ||| | ||| ||||||||||||| | |||||||||||| Sbjct 16772776 AGAACGTGATCCGTGACGCTGTTACCTACACCGAGCACGCTAGCAGGAAGACTGTCACCG 16772717 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| ||||||| || | || | ||||| | | |||| || || || ||| Sbjct 16772716 CCATGGATGTCGTCTACGCTCTCAAGAGGCAAGGAAGGACTCTTTACGGATTCGGCGGTT 16772657 Query 16698 AA 16699 || Sbjct 16772656 AA 16772655 Score = 147 bits (162), Expect = 3e-31 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||||| | |||||||| | ||||| | Sbjct 16651459 GAGACAACATCCAAGGAATCACCAAGCCTGCGATCCGGAGGTTGGCTCGTAGAGGTGGTG 16651518 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | |||| || |||| |||| || | |||||||| | Sbjct 16651519 TCAAGCGTATCAGTGGTCTCATCTACGAGGAGACACGTGGCGTCCTCAAGATCTTTTTGG 16651578 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||| ||| | ||| || |||||||||| | |||||||||||| Sbjct 16651579 AGAACGTGATCCGTGACGCTGTTACCTACACTGAGCACGCTAGGAGGAAGACTGTCACCG 16651638 Query 16638 CCATGGATATCGTCTATGC 16656 |||||||| ||||||| || Sbjct 16651639 CCATGGATGTCGTCTACGC 16651657 >seq2 Length=29139806 Score = 161 bits (178), Expect = 2e-35 Identities = 181/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| ||||| || ||||| | |||||||| | ||||||| Sbjct 24883975 GAGACAACATCCAAGGAATCACTAAGCCTGCGATCCGGAGGTTGGCTCGTAGAGGTGGAG 24883916 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | |||| ||||||| ||||| ||| | |||||||| | Sbjct 24883915 TCAAGCGTATCAGTGGTCTCATCTACGAAGAGACTCGTGGTGTACTCAAGATCTTTTTGG 24883856 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||||||| | ||| ||||||||||||| | |||||||| ||| Sbjct 24883855 AGAACGTGATCCGTGATGCTGTGACCTACACCGAGCACGCTAGGAGGAAGACTGTTACCG 24883796 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | ||||| || | || | ||||| | | |||| || || || ||| Sbjct 24883795 CCATGGATGTTGTCTACGCTCTCAAGAGGCAAGGAAGGACTCTTTACGGATTCGGCGGTT 24883736 Query 16698 AA 16699 || Sbjct 24883735 AA 24883734 Score = 152 bits (168), Expect = 8e-33 Identities = 179/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| ||||| || ||||| | |||||||| | ||||||| Sbjct 24742574 GAGACAACATCCAAGGAATCACTAAGCCTGCGATCCGGAGGTTGGCTCGTAGAGGTGGAG 24742633 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | |||| || |||| |||| || | |||||||| | Sbjct 24742634 TCAAGCGTATCAGTGGTCTCATCTACGAGGAGACACGTGGCGTCCTCAAGATCTTTTTGG 24742693 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||||||| | ||| ||||||||||||| | |||||||||||| Sbjct 24742694 AGAACGTGATCCGTGATGCTGTTACCTACACCGAGCACGCTAGGAGGAAGACTGTCACCG 24742753 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | ||||| || | || | ||||| | | |||| || || || ||| Sbjct 24742754 CCATGGATGTTGTCTACGCTCTCAAGAGGCAAGGAAGGACTCTTTACGGATTCGGCGGTT 24742813 Query 16698 AA 16699 || Sbjct 24742814 AA 24742815 >seq5 Length=34971402 Score = 150 bits (166), Expect = 3e-32 Identities = 181/246 (74%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| |||||||| || |||||||| |||||| | || |||| Sbjct 13760555 GAGACAACATCCAAGGAATCACGAAGCCAGCGATACGTCGTCTCGCTCGTAGAGGAGGAG 13760614 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| || ||| || |||| ||||| | | | ||| |||||||||| ||| Sbjct 13760615 TGAAACGTATCAGTGGTCTGATCTACGAAGAAACGAGAGGTGTGCTGAAGATCTTTCTCG 13760674 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| || |||||| | ||||| || ||||||| | |||||||| || Sbjct 13760675 AGAACGTGATTAGAGATGCTGTGACGTATACTGAACACGCTAGGAGGAAGACTGTTACTG 13760734 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| ||||| | ||||| |||| | ||||| ||||| ||| Sbjct 13760735 CAATGGATGTTGTTTATGCTTTGAAGAGGCAAGGACGTACTCTCTATGGATTTGGTGGTT 13760794 Query 16698 AATCTT 16703 || || Sbjct 13760795 GATTTT 13760800 >seq14 Length=31758599 Score = 149 bits (164), Expect = 1e-31 Identities = 181/247 (73%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||| |||||||||| ||||| ||||||||||| || || |||||||| ||||| | || Sbjct 3284621 TCTTAGAGATAACATTCAAGGTATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCAGAGG 3284562 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| ||||||||| || || | |||| || |||| | | ||| | |||||||| Sbjct 3284561 TGGTGTCAAGCGTATCAGCGGTCTCATCTACGAGGAGACCAGAGGTGTCCTCAAGATCTT 3284502 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| ||| || |||| ||| || || ||| || |||||||| | | ||||| || Sbjct 3284501 TCTCGAGAATGTCATCCGTGACGCCGTCACCTACACTGAGCACGCCAGGAGGAAGACGGT 3284442 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| |||||||| | ||||| || ||||| | |||||||| | | || ||||| || Sbjct 3284441 TACCGCCATGGATGTTGTCTACGCCTTGAAGAGGCAAGGCCGCACTCTCTACGGTTTCGG 3284382 Query 16693 AAGTTAA 16699 ||||| Sbjct 3284381 CGGTTAA 3284375 Score = 143 bits (158), Expect = 4e-30 Identities = 180/247 (73%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||| |||| ||||| ||||| ||||||||||| || || |||||||| ||||| | || Sbjct 3200579 TCTTAGAGACAACATTCAAGGTATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCAGGGG 3200638 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| ||||||||| || || | |||| || |||| | | ||| | |||||||| Sbjct 3200639 TGGTGTCAAGCGTATCAGCGGTCTCATCTACGAGGAGACCAGAGGTGTCCTCAAGATCTT 3200698 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| ||| || |||| ||| || || ||| || |||||||| | | ||||| || Sbjct 3200699 TCTCGAGAATGTCATCCGTGACGCCGTCACCTACACTGAGCACGCCAGGAGGAAGACGGT 3200758 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| |||||||| | ||||| || ||||| | |||||||| | | || ||||| || Sbjct 3200759 TACCGCCATGGATGTTGTCTACGCCTTGAAGAGGCAAGGCCGCACTCTCTACGGTTTCGG 3200818 Query 16693 AAGTTAA 16699 ||||| Sbjct 3200819 CGGTTAA 3200825 Score = 134 bits (148), Expect = 2e-27 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 ||||| ||||| ||||||||||| || || |||||||| ||||| | ||||| |||||| Sbjct 3278002 AACATTCAAGGTATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCAGAGGTGGTGTCAAG 3277943 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 ||| || || | |||| || |||| | | ||| | |||||||| ||| ||| Sbjct 3277942 CGTATCAGCGGTCTCATCTACGAGGAGACCAGAGGTGTCCTCAAGATCTTTCTCGAGAAT 3277883 Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642 || |||| ||| || || ||| || |||||||| | | ||||| || ||| ||||| Sbjct 3277882 GTCATCCGTGACGCCGTCACCTACACTGAGCACGCCAGGAGGAAGACGGTTACCGCCATG 3277823 Query 16643 GATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | ||||| || ||||| | |||||||| | | || ||||| || ||||| Sbjct 3277822 GATGTTGTCTACGCCTTGAAGAGGCAAGGCCGCACTCTCTACGGTTTCGGCGGTTAA 3277766 >seq3 Length=28500605 Score = 149 bits (164), Expect = 1e-31 Identities = 181/247 (73%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||| |||||||||| ||||| ||||||||||| || || |||||||| ||||| | || Sbjct 3173337 TCTTAGAGATAACATTCAAGGTATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCAGGGG 3173396 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| ||||||||| || || | |||| || |||| | | ||| | |||||||| Sbjct 3173397 TGGTGTCAAGCGTATCAGCGGTCTCATCTACGAGGAGACCAGAGGTGTCCTCAAGATCTT 3173456 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| ||| || |||| ||| || || ||| || |||||||| | | ||||| || Sbjct 3173457 TCTCGAGAATGTCATCCGTGACGCCGTCACCTACACTGAGCACGCCAGGAGGAAGACGGT 3173516 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| |||||||| | ||||| || ||||| | |||||||| | | || ||||| || Sbjct 3173517 TACCGCCATGGATGTTGTCTACGCCTTGAAGAGGCAAGGCCGCACTCTCTACGGTTTCGG 3173576 Query 16693 AAGTTAA 16699 ||||| Sbjct 3173577 CGGTTAA 3173583 Score = 149 bits (164), Expect = 1e-31 Identities = 180/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| ||||||||||| || || |||||||| ||||| | ||||| | Sbjct 3243577 GAGATAACATTCAAGGTATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCAGGGGTGGTG 3243518 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || || | |||| || |||| | | ||| | |||||||| ||| Sbjct 3243517 TCAAGCGTATCAGCGGTCTCATCTACGAGGAGACCAGAGGTGTCCTCAAGATCTTTCTCG 3243458 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || |||| ||| || || ||| || |||||||| | | ||||| || ||| Sbjct 3243457 AGAATGTCATCCGTGACGCCGTCACCTACACTGAGCACGCCAGGAGGAAGACGGTTACCG 3243398 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | ||||| || ||||| | || ||||||| | || ||||| || ||| Sbjct 3243397 CCATGGATGTTGTCTACGCCTTGAAGAGGCAGGGCCGTACTCTCTACGGTTTCGGCGGTT 3243338 Query 16698 AATCT 16702 ||||| Sbjct 3243337 AATCT 3243333 >seq17 Length=35492130 Score = 145 bits (160), Expect = 1e-30 Identities = 179/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||| ||||| ||||||||||| || || |||||||| ||||| | ||||| | Sbjct 3136310 GAGACAACATTCAAGGTATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCAGAGGTGGTG 3136251 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || || | |||| || |||| | | ||| | |||||||| ||| Sbjct 3136250 TCAAGCGTATCAGCGGTCTCATCTACGAGGAGACCAGAGGTGTCCTCAAGATCTTTCTCG 3136191 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | ||| || || ||| || |||||||||| | ||||| || ||| Sbjct 3136190 AGAATGTCATTCGTGACGCCGTCACCTACACTGAGCACGCTAGGAGGAAGACGGTTACCG 3136131 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | ||||| || ||||| | |||||||| | | || ||||| || ||| Sbjct 3136130 CCATGGATGTTGTCTACGCCTTGAAGAGGCAAGGCCGCACTCTCTACGGTTTCGGCGGTT 3136071 Query 16698 AATCT 16702 ||||| Sbjct 3136070 AATCT 3136066 Score = 143 bits (158), Expect = 4e-30 Identities = 177/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||| ||||| ||||||||||| || || |||||||| ||||| | ||||| | Sbjct 3063835 GAGACAACATTCAAGGTATCACCAAGCCCGCCATTCGTCGTCTTGCTCGCAGAGGTGGTG 3063894 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || || | |||| || |||| | | ||| | |||||||| ||| Sbjct 3063895 TCAAGCGTATCAGCGGTCTCATCTACGAGGAGACCAGAGGTGTCCTCAAGATCTTTCTCG 3063954 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || |||| ||| || || ||| || |||||||||| | ||||| || ||| Sbjct 3063955 AGAATGTCATCCGTGACGCCGTCACCTACACTGAGCACGCTAGGAGGAAGACGGTTACCG 3064014 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | ||||| || ||||| | |||||||| | | || ||||| || ||| Sbjct 3064015 CCATGGATGTTGTCTACGCCTTGAAGAGGCAAGGCCGCACTCTCTACGGTTTCGGCGGTT 3064074 Query 16698 AA 16699 || Sbjct 3064075 AA 3064076 >seq9 Length=38094978 Score = 143 bits (158), Expect = 4e-30 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || || || | |||||||||| ||||| | Sbjct 15180501 GAGACAACATCCAAGGAATCACCAAGCCTGCGATACGGAGGTTGGCTCGTCGAGGTGGCG 15180560 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || || || |||| || |||| |||| ||| | |||||||| | Sbjct 15180561 TCAAGCGTATCAGCGGTCTGATCTACGAGGAGACGCGTGGCGTTCTCAAGATCTTTTTGG 15180620 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| |||||||| ||||||| | || ||||||||||| | | ||||| || || Sbjct 15180621 AGAACGTTATCCGTGATGCTGTTACTTACACCGAGCACGCAAGGAGGAAGACGGTGACTG 15180680 Query 16638 CCATGGATATCGTCTATGC 16656 |||||||| | |||||||| Sbjct 15180681 CCATGGATGTGGTCTATGC 15180699 Score = 122 bits (134), Expect = 1e-23 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| || || || || || | |||||||||| ||||| | Sbjct 15862149 GAGACAACATCCAAGGAATCACTAAACCGGCGATTCGGAGATTGGCTCGTCGAGGTGGCG 15862090 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| || |||| || |||| ||| | ||| | |||||||| | Sbjct 15862089 TCAAGCGTATCAGTGGTCTGATCTACGAGGAGACTCGCGGCGTTCTCAAGATCTTTTTGG 15862030 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| |||||||| |||||| | || || |||||||| | | ||||| || || Sbjct 15862029 AGAACGTTATCCGTGATGCGGTTACTTACACTGAGCACGCCAGGAGGAAGACGGTGACTG 15861970 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| | || | ||||| | | |||| || || || ||| Sbjct 15861969 CTATGGATGTGGTTTATGCTCTCAAGAGACAAGGAAGGACTCTTTACGGATTCGGTGGTT 15861910 Query 16698 AA 16699 || Sbjct 15861909 AA 15861908 Score = 104 bits (114), Expect = 4e-18 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||| | | ||| ||||| ||||||||||| || || || || || || Sbjct 23792294 GCAAAGAGGCATCGTAAAGTTCTACGAGACAACATCCAAGGGATTACGAAACCTGCGATT 23792235 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || | | || || || |||||| || ||| || |||| ||||||| | Sbjct 23792234 CGTCGTCTCGCGAGAAGAGGAGGCGTGAAGCGTATCAGTGGTCTGATCTACGAAGAGACT 23792175 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | |||||||| ||| ||| ||| || | ||| || | || || ||| Sbjct 23792174 CGCGGCGTACTCAAGATCTTTCTCGAGAACGTGATTCGTGACGCCGTTACTTACACGGAG 23792115 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || || ||||| || | ||||| |||| || || | || | ||||| Sbjct 23792114 CACGCTCGCCGGAAAACTGTTACGGCGATGGACGTCGTTTACGCTCTCAAGAGACAAGGT 23792055 Query 16673 CG 16674 || Sbjct 23792054 CG 23792053 >seq6 Length=26391736 Score = 143 bits (158), Expect = 4e-30 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || || || | |||||||||| ||||| | Sbjct 10579874 GAGACAACATCCAAGGAATCACCAAGCCTGCGATACGGAGGTTGGCTCGTCGAGGTGGCG 10579933 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || || || |||| || |||| |||| ||| | |||||||| | Sbjct 10579934 TCAAGCGTATCAGCGGTCTGATCTACGAGGAGACGCGTGGCGTTCTCAAGATCTTTTTGG 10579993 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| |||||||| ||||||| | || ||||||||||| | | ||||| || || Sbjct 10579994 AGAACGTTATCCGTGATGCTGTTACTTACACCGAGCACGCGAGGAGGAAGACGGTGACTG 10580053 Query 16638 CCATGGATATCGTCTATGC 16656 |||||||| | |||||||| Sbjct 10580054 CCATGGATGTGGTCTATGC 10580072 Score = 129 bits (142), Expect = 9e-26 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| ||||| || || || | |||||||||| ||||| | Sbjct 10952827 GAGACAACATCCAAGGAATCACTAAGCCGGCGATTCGGAGATTGGCTCGTCGAGGTGGCG 10952768 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || || || |||| || |||| |||| ||| | |||||||| | Sbjct 10952767 TCAAGCGTATCAGCGGTCTGATCTACGAGGAGACACGTGGCGTTCTCAAGATCTTTTTGG 10952708 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| |||||||| ||||||| | || ||||||||||| | | ||||| || || Sbjct 10952707 AGAACGTTATCCGTGATGCTGTTACTTACACCGAGCACGCGAGGAGGAAGACGGTGACTG 10952648 Query 16638 CCATGGATATCGTCTATGC 16656 | |||||| | || ||||| Sbjct 10952647 CTATGGATGTGGTTTATGC 10952629 Score = 98.7 bits (108), Expect = 2e-16 Identities = 167/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||| | | ||| ||||| ||||||||||| || || || || || || Sbjct 15856728 GCCAAGAGGCATCGTAAAGTTCTACGAGACAACATCCAAGGGATTACGAAACCTGCGATT 15856669 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || | | || || || |||||| || ||| || |||| ||||||| | Sbjct 15856668 CGTCGTCTCGCGAGAAGAGGAGGCGTGAAGCGTATCAGTGGTCTGATCTACGAAGAGACT 15856609 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | |||||||| ||| ||| ||| || | ||| || | || || ||| Sbjct 15856608 CGCGGCGTACTCAAGATCTTTCTCGAGAACGTGATTCGTGACGCCGTTACTTACACGGAG 15856549 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || || || || || | ||||| |||| || || | || | ||||| Sbjct 15856548 CACGCTCGCCGGAAAACAGTTACGGCGATGGACGTCGTTTACGCTCTCAAGAGACAAGGT 15856489 Query 16673 CG 16674 || Sbjct 15856488 CG 15856487 >seq7 Length=33617777 Score = 140 bits (154), Expect = 5e-29 Identities = 179/246 (73%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| |||||||| || |||||||| || |||| | |||| Sbjct 7439549 GAGACAACATCCAAGGAATCACGAAGCCAGCGATACGTCGTCTCGC---TCGTAGAGGAG 7439605 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| || ||| || |||| ||||| | | | ||| |||||||||| ||| Sbjct 7439606 TGAAACGTATCAGTGGTCTGATCTACGAAGAAACGAGAGGTGTGCTGAAGATCTTTCTCG 7439665 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| || || ||| | ||||| || ||||||| | |||||||| || Sbjct 7439666 AGAACGTGATTAGAGACGCTGTGACGTATACTGAACACGCTAGGAGGAAGACTGTTACTG 7439725 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| ||||| | ||||| |||| ||||||| ||||| ||| Sbjct 7439726 CTATGGATGTTGTTTATGCTTTGAAGAGACAAGGACGTACTCTTTATGGATTTGGTGGTT 7439785 Query 16698 AATCTT 16703 || || Sbjct 7439786 GATTTT 7439791 Score = 140 bits (154), Expect = 5e-29 Identities = 179/246 (73%), Gaps = 3/246 (1%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| |||||||| || |||||||| || |||| | |||| Sbjct 7442503 GAGACAACATCCAAGGAATCACGAAGCCAGCGATACGTCGTCTCGC---TCGTAGAGGAG 7442559 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| || ||| || |||| ||||| | | | ||| |||||||||| ||| Sbjct 7442560 TGAAACGTATCAGTGGTCTGATCTACGAAGAAACGAGAGGTGTGCTGAAGATCTTTCTCG 7442619 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| || || ||| | ||||| || ||||||| | |||||||| || Sbjct 7442620 AGAACGTGATTAGAGACGCTGTGACGTATACTGAACACGCTAGGAGGAAGACTGTTACTG 7442679 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| ||||| | ||||| |||| ||||||| ||||| ||| Sbjct 7442680 CTATGGATGTTGTTTATGCTTTGAAGAGACAAGGACGTACTCTTTATGGATTTGGTGGTT 7442739 Query 16698 AATCTT 16703 || || Sbjct 7442740 GATTTT 7442745 >seq4 Length=30110606 Score = 138 bits (152), Expect = 2e-28 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| ||||| || ||||| | |||||||||| ||||| | Sbjct 13103474 GAGACAACATCCAAGGAATCACTAAGCCTGCGATCCGGAGATTGGCTCGTCGAGGTGGCG 13103533 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || || || ||||||| |||| |||| ||| | |||||||| | Sbjct 13103534 TCAAGCGTATCAGCGGTCTGATCTATGAGGAGACACGTGGCGTTCTCAAGATCTTTTTGG 13103593 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| |||||||| ||||||| | || ||||||||||| | | ||||| || || Sbjct 13103594 AGAACGTTATCCGTGATGCTGTTACTTACACCGAGCACGCGAGGAGGAAGACGGTGACTG 13103653 Query 16638 CCATGGATATCGTCTATGC 16656 | |||||| | || ||||| Sbjct 13103654 CTATGGATGTGGTTTATGC 13103672 Score = 122 bits (134), Expect = 1e-23 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| ||||| || ||||| | |||||||||| || || | Sbjct 13549389 GAGACAACATCCAAGGAATCACTAAGCCTGCGATCCGGAGGTTGGCTCGTCGAGGCGGCG 13549330 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 ||||||| || || || |||| || |||| |||| || | |||||||| | Sbjct 13549329 TCAAGCGCATCAGCGGTCTGATCTACGAGGAGACACGTGGCGTCCTCAAGATCTTTTTGG 13549270 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| |||||||| |||||| | || ||||||||||| | | | ||||| || || Sbjct 13549269 AGAACGTTATCCGTGATGCGGTTACTTACACCGAGCACGCGAGAAGGAAGACGGTGACTG 13549210 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| | || | ||||| | | |||| || || || ||| Sbjct 13549209 CAATGGATGTGGTTTATGCTCTTAAGAGACAAGGAAGGACTCTTTACGGATTCGGCGGTT 13549150 Query 16698 AA 16699 || Sbjct 13549149 AA 13549148 Score = 104 bits (114), Expect = 4e-18 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||| | | ||| ||||| ||||||||||| || || || || || || Sbjct 19262718 GCAAAGAGGCATCGTAAAGTTCTACGAGACAACATCCAAGGGATTACGAAACCTGCGATT 19262659 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || | | || || || |||||| || ||| || |||| ||||||| | Sbjct 19262658 CGTCGTCTCGCGAGAAGAGGAGGCGTGAAGCGTATCAGTGGTCTGATCTACGAAGAGACT 19262599 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | |||||||| ||| ||| ||| || | ||| || | || || ||| Sbjct 19262598 CGCGGCGTACTCAAGATCTTTCTCGAGAACGTGATTCGTGACGCCGTTACTTACACGGAG 19262539 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || || || ||||| | ||||| |||| || || | || | ||||| Sbjct 19262538 CACGCTCGCCGGAAAACAGTCACGGCGATGGACGTCGTTTACGCTCTCAAGAGACAAGGT 19262479 Query 16673 CG 16674 || Sbjct 19262478 CG 19262477 >seq16 Length=29110212 Score = 84.2 bits (92), Expect = 3e-12 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||| |||||||| || |||||||| || ||| | || |||| Sbjct 6620116 GAGACAACATCCAAGGAATCACGAAGCCAGCGATACGTCGTCTCGCCCGTAGAGGAGGAG 6620175 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 | || ||| || ||| || |||| ||||| Sbjct 6620176 TGAAACGTATCAGTGGTCTGATCTACGAAGA 6620206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79041176807916