Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq16 129 7e-25 seq17 122 1e-22 seq7 120 4e-22 seq5 120 4e-22 seq11 116 4e-21 seq18 114 2e-20 seq20 113 5e-20 seq14 111 2e-19 seq6 109 6e-19 seq3 109 6e-19 seq9 104 3e-17 seq4 100 3e-16 seq11323 91.5 2e-13 >seq16 Length=29110212 Score = 129 bits (142), Expect = 7e-25 Identities = 280/415 (67%), Gaps = 8/415 (2%) Strand=Plus/Plus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9283 |||||| || ||| | | ||| || || || | || | || ||| || | | ||||| Sbjct 4733070 ATCAAGAATGTCAGCTCTATTGGTTGCAGCAACAACGATAACACCAGTGTTACCTTCAAA 4733129 Query 9284 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9343 |||||||||||| || | || || || | || ||||| | ||||||||| || Sbjct 4733130 ACCATCCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATTACCTCC--- 4733186 Query 9344 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 |||| |||| | | |||| | || || ||||| || ||||||| |||||||| || Sbjct 4733187 ACCAATTCCAGTTCCTCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCA 4733246 Query 9401 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAAC 9460 || || || ||| | | || ||||| || || ||| ||| || ||||| || Sbjct 4733247 AGGAGCGTTCTCCTTGGCTTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGAC 4733306 Query 9461 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9519 ||||||||| ||||| | | | | | || | || ||| || ||| || |||||| | Sbjct 4733307 AAACATCTCAACAAACTCAGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCAG 4733365 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCC 9579 |||||||| || | ||| || || || ||||| || ||| ||||| |||| Sbjct 4733366 CAATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTT 4733425 Query 9580 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634 || |||||||| ||| || | | ||||| |||| ||| ||||| ||||| Sbjct 4733426 TCGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAGAAACTCCAC 4733480 >seq17 Length=35492130 Score = 122 bits (134), Expect = 1e-22 Identities = 197/279 (71%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||||||||| | || |||||||| ||||||| |||||||| || Sbjct 29616877 AAACCCATCCATCTCTGTCAACAACTGATTAATAGTCTGTTCCCTCTCATCATTTCCT-- 29616934 Query 9341 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | ||| ||||| | | ||| | ||||| || ||||||||||||||||| |||||| Sbjct 29616935 CCTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAATACAATA 29616994 Query 9399 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 || || | ||| | || | ||||| | ||| | ||| || || || ||||| Sbjct 29616995 CAAGG-GGCTTTAGACTTAGCCTTCTCAAACAAATCCCTAACTCTAGATGCACCAACACC 29617053 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 ||||| | ||||||||| | | ||| | ||| || ||| || || || ||| || Sbjct 29617054 CACAAAAAGCTCCACAAACTCCGAGGCCGCACAAGAGAAGAACGGCACTCCAGCTTCCCC 29617113 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || | || | || | || |||||||||||||| || Sbjct 29617114 AGCCACCGCCCTAGCCAAGAGTGTCTTACCCGTACCGGG 29617152 Score = 114 bits (126), Expect = 2e-20 Identities = 246/362 (68%), Gaps = 12/362 (3%) Strand=Plus/Plus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 |||||||||||||| || |||| || || |||| || ||||| | ||||||||| || Sbjct 2556527 TCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATTACCT 2556586 Query 9339 GGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACA 9395 |||| || | || | |||| | || || ||||| || ||||| | || ||| Sbjct 2556587 CC---ACCAATTCCTGTACCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACA 2556643 Query 9396 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 || || || |||||| ||| ||| || ||||| || |||||| || || ||| Sbjct 2556644 ATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCACGGACCCTTGATGCACCAACA 2556703 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 9514 |||||||||||||| ||||| | | | | | || | | |||||| ||| || ||| Sbjct 2556704 CCAACAAACATCTCAACAAACTCAGAACCCG-AGATGGAAAAGAAGGGTACACCAGCTTC 2556762 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 ||| ||||||||| || | || || || || ||||| || ||| || | | Sbjct 2556763 ACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCTGTACCAGGAGGACCAATAAGAA--GA 2556820 Query 9575 ACCCCGT--GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCC 9632 ||||| | || ||| ||| ||| || | | |||||||| | ||| ||||| ||| Sbjct 2556821 ACCCCTTTGGGGATCCGGGCACCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCC 2556880 Query 9633 AC 9634 || Sbjct 2556881 AC 2556882 >seq7 Length=33617777 Score = 120 bits (132), Expect = 4e-22 Identities = 278/415 (67%), Gaps = 8/415 (2%) Strand=Plus/Plus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9283 |||||| || || | | ||| || || || | || | || ||| || | | ||||| Sbjct 5165824 ATCAAGAATGTCTGCTCTATTGGTTGCAGCAACTACGATAACACCAGTGTTACCTTCAAA 5165883 Query 9284 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9343 |||||||||||| || | || || || | || ||||| | ||||||||| || Sbjct 5165884 ACCATCCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATTACCTCC--- 5165940 Query 9344 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 |||| |||| | | |||| | || || ||||| || ||||||| |||||||| || Sbjct 5165941 ACCAATTCCAGTTCCTCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCA 5166000 Query 9401 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAAC 9460 || || || ||| | | || ||||| || || ||| ||| || ||||| || Sbjct 5166001 AGGAGCGTTCTCCTTGGCTTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGAC 5166060 Query 9461 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9519 ||||||||| ||||| | | | | | || | || ||| || ||| || |||||| | Sbjct 5166061 AAACATCTCAACAAACTCAGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCAG 5166119 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCC 9579 |||||||| || | ||| || || || ||||| || ||| ||||| |||| Sbjct 5166120 CAATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTT 5166179 Query 9580 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634 || |||||||| ||| || | | ||||| |||| ||| | ||| ||||| Sbjct 5166180 TCGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCAC 5166234 Score = 96.9 bits (106), Expect = 4e-15 Identities = 189/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 9359 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 9418 |||| | || || ||||| || ||||||| |||||||| || || || || ||| Sbjct 5166351 TTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGC 5166410 Query 9419 GATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 9478 | | || ||||| || || ||| ||| || ||||| ||||||||||| ||||| | Sbjct 5166411 TTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACTC 5166470 Query 9479 TGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | | | || | || ||| || ||| || |||||| ||||||||| || | || Sbjct 5166471 AGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAAA 5166529 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCAC 9597 | || || || ||||| || ||| ||||| |||| || |||||||| ||| Sbjct 5166530 GGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCAA 5166589 Query 9598 TTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634 || | ||||||| |||| ||| | ||| ||||| Sbjct 5166590 CCGCAGTGAATCTCTCGGGTTTCTTCAAAAACTCCAC 5166626 >seq5 Length=34971402 Score = 120 bits (132), Expect = 4e-22 Identities = 297/447 (66%), Gaps = 8/447 (2%) Strand=Plus/Plus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 |||||||| || ||||| | | | || |||||| || || | | ||| || || Sbjct 11285952 CGATCAAACCGTCCTGGCCTCAACAAAGCAGAATCAAGAATGTCTGCTCTATTGGTTGCA 11286011 Query 9252 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311 || | || | || ||| || | | ||||||||||||||||| || | || || || Sbjct 11286012 GCAACTACGATAACACCAGTGTTACCTTCAAAACCATCCATCTCAGTTAGGAGCTGATTG 11286071 Query 9312 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCC 9368 | || ||||| | ||||||||| || |||| || | | | |||| | || Sbjct 11286072 AGGGTCTGTTCTCTTTCATCATTACCTCC---ACCAATTCCGGTCCCCCTTTGCCTACCG 11286128 Query 9369 ACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAG 9428 || ||||| || ||||||| |||||||| || || || || ||| | | || Sbjct 11286129 ACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGCTTTCTTGAAA 11286188 Query 9429 AGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA 9488 ||||| || || ||| ||| || ||||| ||||||||||| ||||| | | | | | Sbjct 11286189 AGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACTCAGAACCAG-A 11286247 Query 9489 CATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 || | || ||| || ||| || |||||| ||||||||| || | ||| || || || Sbjct 11286248 GATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAAAGGGTTTTCCC 11286307 Query 9548 CGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTA 9607 ||||| || ||| ||||| |||| || |||||||| ||| || | | Sbjct 11286308 GGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCAACCGCAGTGAA 11286367 Query 9608 TCTCTCAGGTTGCTTGAGAAAATCCAC 9634 ||||| |||| ||| | ||| ||||| Sbjct 11286368 CCTCTCGGGTTTCTTCAAAAACTCCAC 11286394 >seq11 Length=49703607 Score = 116 bits (128), Expect = 4e-21 Identities = 250/371 (67%), Gaps = 12/371 (3%) Strand=Plus/Minus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 || ||||| | |||||| | || || ||| ||||| | |||| | || || || Sbjct 35467606 CGGTCAAATCTACCTGGTCTCAGCAGTGCGGAGTCAAGAACATCAGGTCTGTTGGTTGCA 35467547 Query 9252 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311 || | |||| | ||| | | | | ||| ||||||||||| |||||||| || ||| Sbjct 35467546 GCCAACACAATGACACCGGAATTACCAGAAAATCCATCCATCTCAGTCAAAAGCTGATTA 35467487 Query 9312 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 9369 || || ||||| | |||||||| | | | ||| ||||| | |||||| | || | Sbjct 35467486 ATCGTCTGTTCTCTCTCATCATTTCC--ACCTCCCATCCCAGCTCCTCGTTGCCTACCAA 35467429 Query 9370 CGGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCA 9425 | ||||||||||||||||| || ||||| || || || |||| || | ||| Sbjct 35467428 CAGCATCAATCTCATCAATAAACACAATGCAGGGAGCTTTCGATTTC----GCCTTCTCA 35467373 Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485 || | ||| | ||| || || |||||||||||||| | ||| ||||| | | || Sbjct 35467372 AACAAATCCCTAACTCTAGACGCACCCACACCAACAAAAAGCTCAACAAACTCCGAAGCA 35467313 Query 9486 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9545 | ||| | |||||| || | ||| || || | |||| || | ||| ||||| Sbjct 35467312 GCACACGAAAAGAAGGGCACTCCTGCTTCTCCAGCTACAGCTCTAGCCAAAAGCGTCTTC 35467253 Query 9546 CCCGTACCTGG 9556 |||||||| || Sbjct 35467252 CCCGTACCCGG 35467242 >seq18 Length=20869551 Score = 114 bits (126), Expect = 2e-20 Identities = 196/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||| |||||||| || ||||| || ||||| | |||||||| | Sbjct 6948822 AAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCC--A 6948879 Query 9341 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | ||| ||||| | |||||| | || || ||||||||||||||||| || ||||| Sbjct 6948880 CCTCCCATCCCAGCTCCTCGTTGCCTACCAACAGCATCAATCTCATCAATAAACACAATG 6948939 Query 9399 CATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454 || || || |||| || | ||||| | ||| | ||| || || ||||| Sbjct 6948940 CAGGGAGCTTTCGATTTC----GCCTTCTCAAACAAATCCCTAACTCTAGACGCACCCAC 6948995 Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9514 ||||||||| | ||| ||||| | | || | ||| | |||||| || | ||| Sbjct 6948996 ACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACACGAAAAGAAGGGCACTCCTGCTTC 6949055 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || || | |||| || | ||| ||||| |||||||| || Sbjct 6949056 TCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGG 6949097 >seq20 Length=30099736 Score = 113 bits (124), Expect = 5e-20 Identities = 249/371 (67%), Gaps = 12/371 (3%) Strand=Plus/Minus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 || ||||| | |||||| | ||| | ||| ||||| | |||| | || || || Sbjct 21057851 CGGTCAAATCTACCTGGTCTAAGCAATGCGGAGTCAAGAACATCAGGTCTGTTGGTTGCA 21057792 Query 9252 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311 || | |||| | ||| | | | | ||| ||||||||||| |||||||| || ||| Sbjct 21057791 GCCAACACAATGACACCGGAATTACCAGAAAATCCATCCATCTCAGTCAAAAGCTGATTA 21057732 Query 9312 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 9369 || || ||||| | |||||||| | | | ||| ||||| | | |||| | || | Sbjct 21057731 ATCGTCTGTTCTCTCTCATCATTTCC--ACCTCCCATCCCAGCTCCTCTTTGCCTACCAA 21057674 Query 9370 CGGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCA 9425 | ||||||||||||||||| || ||||| || || || |||| || | ||| Sbjct 21057673 CAGCATCAATCTCATCAATAAACACAATGCAGGGAGCTTTCGATTTC----GCCTTCTCA 21057618 Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485 || | ||| | ||| || || |||||||||||||| | ||| ||||| | | || Sbjct 21057617 AACAAATCCCTAACTCTAGACGCACCCACACCAACAAAAAGCTCAACAAACTCCGAAGCA 21057558 Query 9486 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9545 | ||| | |||||| || | ||| || || | |||| || | ||| ||||| Sbjct 21057557 GCACACGAAAAGAAGGGCACTCCTGCTTCTCCAGCTACAGCTCTAGCCAAAAGCGTCTTC 21057498 Query 9546 CCCGTACCTGG 9556 |||||||| || Sbjct 21057497 CCCGTACCCGG 21057487 >seq14 Length=31758599 Score = 111 bits (122), Expect = 2e-19 Identities = 295/447 (66%), Gaps = 8/447 (2%) Strand=Plus/Plus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 || ||||| || ||||| | || | ||| ||||| || || | | || || || Sbjct 2668007 CGGTCAAACCGCCCTGGTCTTAGCAAAGCGGAGTCAAGAATGTCTGCTCTGTTGGTTGCA 2668066 Query 9252 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311 || | || | || ||| || | | |||||||||||||| || |||| || || || Sbjct 2668067 GCAACTACGATAACACCAGTGTTACCCTCAAAACCATCCATTTCAGTCAGGAGCTGATTT 2668126 Query 9312 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCC 9368 | || ||||| | ||||||||| || |||| || | || | |||| | || Sbjct 2668127 AGGGTCTGTTCTCTTTCATCATTACCTCC---ACCAATTCCTGTACCTCTTTGCCTACCA 2668183 Query 9369 ACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAG 9428 || ||||| || ||||| | || ||||| || || |||||| ||| ||| || Sbjct 2668184 ACAGCATCTATTTCATCTACAAAAACAATGCACGGAGCATTTTCTTTGGCTTTTTTGAAA 2668243 Query 9429 AGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA 9488 ||||| || |||||| || || ||||||||||||||||| ||||| | | | | | Sbjct 2668244 AGATCACGGACCCTTGATGCACCAACACCAACAAACATCTCAACAAACTCAGAACCCG-A 2668302 Query 9489 CATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 || | | |||||| ||| || |||||| || |||||| || | || || || || Sbjct 2668303 GATGGAAAAGAAGGGTACACCAGCTTCACCAGCGATGGCTTTTGCTAACAGGGTTTTCCC 2668362 Query 9548 CGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTA 9607 ||||| || ||| ||||| | || || ||| ||| ||| || | | Sbjct 2668363 AGTACCAGGAGGACCAATAAGGAGAACTCCTTTGGGGATCCGGGCACCAACAGCAGTGAA 2668422 Query 9608 TCTCTCAGGTTGCTTGAGAAAATCCAC 9634 |||||||| | ||| ||||| ||||| Sbjct 2668423 CCTCTCAGGCTTCTTCAGAAACTCCAC 2668449 Score = 91.5 bits (100), Expect = 2e-13 Identities = 191/280 (68%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||||||||| | || ||||| || ||||| | |||||||| || Sbjct 26609501 AAACCCATCCATCTCTGTCAACAACTGATTAATGGTCTGTTCTCTCTCATCATTTCCT-- 26609558 Query 9341 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | ||| ||||| | | ||| | ||||| || || |||||||||||||| |||||| Sbjct 26609559 CCACCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCGATCTCATCAATGAATACAATA 26609618 Query 9399 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 || || | ||| | || | || || | ||| | ||| || || |||||||| Sbjct 26609619 CAAGG-GGCTTTAGACTTAGCCTTCTCGAACAAATCCCTAACTCTAGATGCACCCACACC 26609677 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 || || | ||||||||| | | ||| | || || ||| || || || ||| || Sbjct 26609678 CACGAAAAGCTCCACAAACTCCGAGGCAGCGCAGGAGAAGAACGGCACTCCAGCTTCCCC 26609737 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9557 || | || | || | || || ||||||||||| ||| Sbjct 26609738 AGCCACCGCCCTAGCCAAGAGTGTTTTACCCGTACCGGGC 26609777 >seq6 Length=26391736 Score = 109 bits (120), Expect = 6e-19 Identities = 142/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||| || || || || || ||||| |||||||| ||||| |||||||| || Sbjct 4051023 GTGTAGACCTTCGTCACGCGAGATGAGTTCGTTTGAGAAAGTAAGGCCAGGCATGAGTCC 4051082 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | |||||| ||||||||||||||||| || || || Sbjct 4051083 TCGCTTCTTAAGCCAGAAGATTGAGCAGAAGCTTCCGGAGAAGAAGATACCTTCGACGCA 4051142 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || || | | || || ||||||| |||| | ||| | ||||||||| || Sbjct 4051143 AGCGAAAGCGATGATTCGTTCAGCGAAGGTCTGAGA---TCCGTCGATCCATTTCATCGC 4051199 Query 117465 CCATTTCGCCTTCTTC 117480 ||| | || |||||| Sbjct 4051200 CCACTGAGCTTTCTTC 4051215 >seq3 Length=28500605 Score = 109 bits (120), Expect = 6e-19 Identities = 195/280 (70%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||||||||| | || ||||| || ||||| | |||||||| || Sbjct 24326982 AAAGCCATCCATCTCTGTCAACAACTGATTAATGGTCTGTTCTCTCTCATCATTTCCT-- 24327039 Query 9341 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | ||| ||||| | | ||| | ||||| || ||||||||||||||||| |||||| Sbjct 24327040 CCTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAATACAATA 24327099 Query 9399 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 || || | ||| | || | || || | ||| | ||| || || |||||||| Sbjct 24327100 CAAGG-GGCTTTAGACTTAGCCTTCTCGAACAAATCCCTAACTCTAGATGCACCCACACC 24327158 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 || || | ||||||||| | | ||| | || || ||| || || || ||| || Sbjct 24327159 CACGAAAAGCTCCACAAACTCCGAGGCAGCGCAGGAGAAGAACGGTACTCCAGCTTCCCC 24327218 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9557 || | || | || | ||||||||||||||||| ||| Sbjct 24327219 AGCCACCGCCCTAGCCAAGAGAGTCTTACCCGTACCAGGC 24327258 Score = 107 bits (118), Expect = 2e-18 Identities = 242/360 (67%), Gaps = 8/360 (2%) Strand=Plus/Plus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 |||||||||||||| || |||| || || |||| || ||||| | ||||||||| || Sbjct 2646617 TCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATTACCT 2646676 Query 9339 GGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACA 9395 |||| || | | | |||| | || || ||||| || ||||| | || ||| Sbjct 2646677 CC---ACCAATTCCTGTTCCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACA 2646733 Query 9396 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 || || || |||||| ||| ||| || |||||||| |||||| || || ||| Sbjct 2646734 ATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCGCGGACCCTTGATGCACCAACA 2646793 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 9514 || ||||||||||| ||||| | | | | | || | | |||||| ||| || ||| Sbjct 2646794 CCGACAAACATCTCAACAAACTCAGAACCCG-AGATGGAAAAGAAGGGTACACCAGCTTC 2646852 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 ||| ||||||||| || | || || || || ||||| || || ||||| | Sbjct 2646853 ACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCAGTACCAGGAGGGCCAATAAGGAGAAC 2646912 Query 9575 ACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634 ||| || ||| ||| ||| || | |||||||| | ||| ||||| ||||| Sbjct 2646913 ACCTTTGGGGATCCGGGCACCAACAGCAGTAAACCTCTCAGGCTTCTTCAGAAACTCCAC 2646972 >seq9 Length=38094978 Score = 104 bits (114), Expect = 3e-17 Identities = 141/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||| || || || || || ||||| |||||||| ||||| ||||||||||| Sbjct 5073836 GTGTAGACCTTCGTCACGCGAGATCAGTTCGTTTGAGAAAGTAAGGCCAGGCATGAGACC 5073895 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || ||||| | ||| | || | |||||| ||||||||||||||||| || || || Sbjct 5073896 TCGTTTCTTAAGCCAGAAGATTGAGCAGAAGCTTCCGGAGAAGAAGATACCTTCGACGCA 5073955 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || || | | || || ||||||| |||| | ||| | |||| |||| || Sbjct 5073956 AGCGAAAGCGATGATTCGTTCAGCGAAGGTTTGAGA---TCCGTCGATCCATGTCATAGC 5074012 Query 117465 CCATTTCGCCTTCTTC 117480 ||| | || |||||| Sbjct 5074013 CCACTGGGCTTTCTTC 5074028 >seq4 Length=30110606 Score = 100 bits (110), Expect = 3e-16 Identities = 140/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||| || || || || || ||||| |||||||| ||||| |||||||| || Sbjct 6029452 GTGTAGACCTTCGTCACGCGAGATCAGTTCGTTTGAGAAAGTAAGGCCAGGCATGAGTCC 6029511 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || ||||| | ||| | || | |||||| ||||||||||||||||| || || || Sbjct 6029512 TCGTTTCTTAAGCCAGAAGATTGAGCAGAAGCTTCCGGAGAAGAAGATACCTTCGACGCA 6029571 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || || | | || || ||||||| |||| | || | ||||||||| || Sbjct 6029572 AGCGAAAGCTATGATTCGTTCAGCGAAGGTCTGAGA---TCCTTCGATCCATTTCATCGC 6029628 Query 117465 CCATTTCGCCTTCTTC 117480 ||| | || |||||| Sbjct 6029629 CCACTGAGCTTTCTTC 6029644 >seq11323 Length=362 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 9359 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 9418 |||| | || || ||||| || ||||||| |||||||| || || || || ||| Sbjct 360 TTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGC 301 Query 9419 GATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 9478 | | || ||||| || || ||| ||| || ||||| ||||||||||| ||||| | Sbjct 300 TTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACTC 241 Query 9479 TGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | | | || | || ||| || ||| || |||||| ||||||||| || | || Sbjct 240 AGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAAA 182 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCAC 9597 | || || || ||||| || ||| ||||| |||| || |||||||| ||| Sbjct 181 GGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCAA 122 Query 9598 TTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634 || | | ||||| |||| ||| | ||| ||||| Sbjct 121 CCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCAC 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589706370430880