Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq8 109 4e-19 seq13 107 1e-18 seq20 104 2e-17 seq12 95.1 9e-15 seq11 91.5 1e-13 seq17 89.7 4e-13 seq10 86.0 5e-12 >seq8 Length=27720346 Score = 109 bits (120), Expect = 4e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || | || || || ||||||||||| | || | ||| Sbjct 8688366 AGACGCAACACAAGGTGAAGGGTTGTTTCCTTCTGGATATTGTAATCCGCAAGTGTCCGA 8688307 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 | || || | ||||||||||||||| || |||| ||| || |||| ||||| | || || Sbjct 8688306 CCATCCTCTAGCTGCTTACCGGCAAAGATGAGTCTCTGCTGGTCCGGTGGGATC-CCTTC 8688248 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 ||| || |||||| || ||| | | | || ||||| ||| || |||| ||| Sbjct 8688247 CTTATCCTGAATCTTAGCCTTGACATTATCGATAGTGTCTGAGCTCTCAACTTCCAACGT 8688188 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||||||||| ||||| || ||||| Sbjct 8688187 GATAGTCTTCCCTGTCAAAGTTTTCACAAAGATTTGCAT 8688149 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || ||| |||||| || ||||||||||||| Sbjct 6052400 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATATTGTAATCAGCC 6052459 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || | ||||||||||||||| || || | ||| ||||||| || Sbjct 6052460 AAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGG 6052519 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| || || ||||| ||| ||| | | || ||||| ||| ||| Sbjct 6052520 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATAGTATCTGAGCTCTCAACC 6052579 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || || | ||| || ||||| || ||||| Sbjct 6052580 TCCAAAGTGATGGTTTTACCGGTGAGAGTCTTAACAAAGATTTGCAT 6052626 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | |||||| || || || |||||| || |||||||| |||| | Sbjct 8687919 CCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCAGCT 8687860 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | ||||||||||||||| || || | ||| || |||| ||| Sbjct 8687859 AGCGTGCGACCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGA 8687800 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || |||||| ||| ||| | | || || || ||| ||| Sbjct 8687799 ATCCCTTCTTTATCCTGAATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCAACC 8687740 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || ||||| || || ||||| || ||||| Sbjct 8687739 TCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATTTGCAT 8687693 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || || || || ||||||||||| | || | ||| | || || Sbjct 26613654 ACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCTGCAAGTGTGCGACCATCCTCG 26613595 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || |||| ||| ||||||| ||||| ||||||||||| Sbjct 26613594 AGCTGCTTTCCAGCGAAGATGAGTCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCTTGG 26613535 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | ||||| ||| ||||| | || || ||||| Sbjct 26613534 ATCTTGGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTTTTG 26613475 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || ||||| |||||||| Sbjct 26613474 CCAGTCAAAGTCTTGACAAAGATCTGCAT 26613446 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| ||||| || | || || ||| ||| ||||| ||||||||||| | Sbjct 26613216 CCACCACGTAGACGCAAAACAAGGTGAAGTGTGGACTCCTTTTGGATATTGTAATCTGCA 26613157 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | |||||| || || || || |||| ||| ||||||| ||| Sbjct 26613156 AGTGTGCGACCATCCTCAAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGATCCGGGGGG 26613097 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| || || | | | | ||||| ||||||| Sbjct 26613096 ATCCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCAATGGTATCTGAGCTCTCCACC 26613037 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || || | || || ||||| |||||||| Sbjct 26613036 TCCAAAGTTATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 26612990 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| ||||| |||| | | | | Sbjct 24116539 AGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTG 24116480 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| ||||| || || | | ||| || || | |||| |||||| Sbjct 24116479 CCATCTTCAAGTTGCTTTCCGGCGAAGATTAACCTCTGCTGGTCTGGTGGAATACCCTCC 24116420 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | || || ||||||||||| || Sbjct 24116419 TTGTCTTGGATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTG 24116360 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||||||||| || |||||||||||||| Sbjct 24116359 ATAGTCTTTCCCGTCAAAGTCTTGACAAAAATCTGCAT 24116322 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || || |||||||| | ||| | ||| | || || Sbjct 8688585 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGACCATCCTCA 8688526 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||| || || || || || |||| |||||| |||| || | || ||||| || | Sbjct 8688525 AGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTATCCTGA 8688466 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || || | | | | ||||| ||| ||||||| || || || || Sbjct 8688465 ATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTCTCTACCTCCAAGGTGATAGTCTTC 8688406 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| ||||| || ||||| Sbjct 8688405 CCTGTCAAAGTTTTCACAAAGATTTGCAT 8688377 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| ||||| |||| | | | | Sbjct 1543696 AGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTG 1543637 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||| ||||| || |||| | ||| || |||| || | |||||| Sbjct 1543636 CCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCC 1543577 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || || ||||||||||| ||| Sbjct 1543576 TTGTCTTGGATCTTGGCCTTAACATTGTCGATAGTGTCAGAGCTCTCCACCTCCAAAGTA 1543517 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || || || || ||||| Sbjct 1543516 ATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 1543479 >seq13 Length=24101694 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || ||||||||||| | ||| | ||| | || || Sbjct 968879 ACCAAGTGAAGAGTTGACTCCTTCTGGATATTGTAATCTGCAAGAGTCCGACCATCCTCG 968938 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||||| || || || |||| ||| ||||||| || || ||||||||||| | Sbjct 968939 AGATGCTTACCAGCGAAGATGAGTCTCTGCTGATCCGGGGAAATTCCCTCCTTGTCCTGA 968998 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | ||||| ||| ||||| | || || ||||| Sbjct 968999 ATCTTGGCTTTGACATTGTCAATGGTGTCTGAACTCTCAACCTCGAGGGTGATGGTTTTG 969058 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || ||||| |||||||| Sbjct 969059 CCAGTCAAAGTCTTGACAAAGATCTGCAT 969087 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || ||| |||||| || ||||||||||||| Sbjct 9156993 CCACCTCTCAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGCC 9157052 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || | ||||||||||||||| || || | ||| || |||| || Sbjct 9157053 AAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 9157112 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| || || ||||| ||| ||| | | || ||||| ||| ||| Sbjct 9157113 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATAGTATCTGAGCTCTCAACC 9157172 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || || | ||| || ||||| || ||||| Sbjct 9157173 TCTAGGGTGATTGTTTTACCGGTGAGAGTCTTCACAAAGATTTGCAT 9157219 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | |||||| || || || |||||| || |||||||| |||| | Sbjct 11436758 CCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCAGCT 11436699 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | ||||||||||||||| || || | ||| || |||| ||| Sbjct 11436698 AGCGTGCGACCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGA 11436639 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || |||||| ||| ||| | | | || || ||| ||| Sbjct 11436638 ATCCCTTCTTTATCCTGAATCTTAGCTTTAACATTGTCAATCGTATCCGAACTCTCAACC 11436579 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || ||||| || || ||||| |||||||| Sbjct 11436578 TCGAGGGTGATGGTTTTACCAGTCAACGTCTTCACAAAGATCTGCAT 11436532 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| ||||| || | || || ||| ||| || || ||||||||||| | Sbjct 969317 CCACCACGTAGACGCAAAACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAATCTGCA 969376 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | |||||| || ||||| || |||| ||| ||||||| || Sbjct 969377 AGTGTACGACCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGATCCGGAGGG 969436 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| || || | | | | ||||| ||||||| Sbjct 969437 ATCCCTTCCTTGTCCTAAATCTTAGCCTTGACGTTATCAATGGTATCTGAGCTCTCCACC 969496 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || || | || || ||||| |||||||| Sbjct 969497 TCCAAAGTTATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 969543 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| ||||| |||| | | | | Sbjct 5373467 AGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTG 5373408 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||| |||||||| |||| | ||| || |||| || | |||||| Sbjct 5373407 CCGTCTTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCC 5373348 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || || ||||||||||| ||| Sbjct 5373347 TTGTCTTGGATCTTGGCCTTAACATTGTCGATAGTGTCAGAGCTCTCCACCTCCAAAGTA 5373288 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || || || || ||||| Sbjct 5373287 ATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 5373250 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || ||||||||| || |||||||| | ||| | || Sbjct 9156774 AGACGAAGCACAAGATGGAGGGTAGACTCTTTTTGGATGTTGTAATCCGCTAGGGTGCGT 9156833 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || ||||| || || |||| ||| || |||| ||| | || ||| Sbjct 9156834 CCATCCTCAAGCTGTTTCCCGGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATCCCTTCC 9156893 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| || || | | | | ||||| ||| ||||||| || Sbjct 9156894 TTGTCTTGAATCTTTGCCTTGACGTTATCGATCGTGTCTGAGCTCTCAACCTCCAAAGTG 9156953 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || |||||||||||||| Sbjct 9156954 ATAGTCTTGCCAGTTAGGGTCTTCACAAAAATCTGCAT 9156991 >seq20 Length=30099736 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || || |||||| || ||||||||||||| Sbjct 11036407 CCACCTCTCAGACGAAGCACCAAATGGAGAGTCGACTCTTTCTGGATATTGTAATCAGCC 11036466 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || | ||||||||||||||| || || | |||||| |||| || Sbjct 11036467 AAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGTGGG 11036526 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| || || ||||| ||| ||| | | || ||||| ||| ||| Sbjct 11036527 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATAGTATCTGAGCTCTCAACC 11036586 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || || | ||| || ||||| || ||||| Sbjct 11036587 TCCAAAGTGATGGTTTTACCGGTGAGAGTCTTAACAAAGATTTGCAT 11036633 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || ||| |||||| || |||||||| |||| || | || Sbjct 14739879 AGACGAAGCACCAAGTGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCGAGTGTATGA 14739820 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCC-GTGGGAACGCCCTC 48667 | || || | ||||||||||||||| || || | ||| |||||| |||||| | ||||| Sbjct 14739819 CCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATC-CCCTC 14739761 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 || || ||||| ||| ||| | | || || || ||| ||||| | || Sbjct 14739760 TTTATCCTGGATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCAACCTCGAGAGT 14739701 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || ||||| || || ||||| |||||||| Sbjct 14739700 GATGGTTTTACCAGTCAACGTCTTCACAAAGATCTGCAT 14739662 Score = 95.1 bits (104), Expect = 9e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || ||| |||||||| ||||| |||| || | || Sbjct 11036188 AGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCAGCAAGGGTGCGT 11036247 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 |||| || | ||| || || |||||||| |||| ||| ||||| | ||||| | || || Sbjct 11036248 CCGTCTTCAAGCTGTTTCCCAGCAAATATGAGTCTCTGCTGATCTGGTGGGATC-CCTTC 11036306 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| ||||||| || || | | | || ||||| ||| ||||||| || Sbjct 11036307 CTTGTCTTGAATCTTTGCCTTGACGTTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGT 11036366 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || |||||||||||||| Sbjct 11036367 GATAGTCTTGCCAGTTAGGGTCTTCACAAAAATCTGCAT 11036405 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || ||| ||||| || |||||||| | ||| | ||| Sbjct 14740335 AGACGAAGCACAAGATGGAGAGTCGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGA 14740276 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || || || || |||| |||||| || | |||| || ||| Sbjct 14740275 CCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATCCCTTCC 14740216 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | || || || ||| ||||||| ||| Sbjct 14740215 TTGTCCTGAATCTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAACGTG 14740156 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||||||||| ||||| || ||||| Sbjct 14740155 ATAGTCTTCCCTGTCAAAGTTTTCACAAAGATTTGCAT 14740118 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| ||||| |||| | | | | Sbjct 5698735 AGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTG 5698676 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | || || ||||| || |||| | ||| || |||| || | |||||| Sbjct 5698675 CCGTCTTCAAGTTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCC 5698616 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | | || || ||||||||||| || Sbjct 5698615 TTGTCTTGGATTTTAGCTTTGACATTATCGATGGTGTCAGAGCTCTCCACCTCCAAAGTG 5698556 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||||||||| || || || |||||||| Sbjct 5698555 ATGGTCTTCCCCGTCAAAGTCTTGACGAAGATCTGCAT 5698518 >seq12 Length=33044737 Score = 95.1 bits (104), Expect = 9e-15 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| |||||||||||||| | || | | ||| | || || | || || |||||||| Sbjct 24357488 CTCTTTCTGAATATTGTAATCCGCTAAAGTGCGACCATCTTCGAGTTGTTTTCCGGCAAA 24357547 Query 48635 TATCAGTCGCTGTTGATCC-GTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAG 48693 || |||| ||| || ||| |||||| | || || ||||| |||||| || ||| Sbjct 24357548 GATTAGTCTCTGCTGGTCCGGTGGGATC-CCTTCTTTGTCTTGAATCTTGGCCTTCACAT 24357606 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | | || || ||| ||||| | || || || || ||||||||||| || | Sbjct 24357607 TGTCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTCTTGCCCGTCAAAGTCTTGA 24357666 Query 48754 CAAAAATCTGCATC 48767 |||||||||||||| Sbjct 24357667 CAAAAATCTGCATC 24357680 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| ||||| |||| || | | | Sbjct 2891525 AGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCTAAAGTCCTG 2891584 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||||||||||| |||| | ||| || || | || | |||||| Sbjct 2891585 CCGTCCTCGAGTTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCC 2891644 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | || || ||||||||||| || Sbjct 2891645 TTGTCTTGGATTTTAGCTTTGACATTGTCTATGGTGTCAGAGCTCTCCACCTCCAAAGTG 2891704 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||||||| || || || || ||||| Sbjct 2891705 ATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 2891742 >seq11 Length=49703607 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| ||||| |||| | | | | Sbjct 3123554 AGACGCAAGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTG 3123613 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||||||||| || |||| | ||| || |||| || | |||||| Sbjct 3123614 CCGTCTTCAAGTTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCC 3123673 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | | || || ||||||||||| || Sbjct 3123674 TTGTCTTGGATTTTAGCTTTGACATTATCGATGGTGTCAGAGCTCTCCACCTCCAAAGTG 3123733 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||||||| || || || |||||||| Sbjct 3123734 ATAGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3123771 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| |||||||||||||| | || | | ||| | || || | || || |||||||| Sbjct 21795370 CTCTTTCTGAATATTGTAATCCGCTAAAGTGCGACCATCTTCGAGTTGTTTTCCGGCAAA 21795429 Query 48635 TATCAGTCGCTGTTGATCC-GTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAG 48693 || |||| ||| || ||| |||||| | || || ||||| |||||| || ||| Sbjct 21795430 GATTAGTCTCTGCTGGTCCGGTGGGATC-CCTTCTTTGTCTTGAATCTTGGCCTTCACAT 21795488 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | | || || ||| ||||| | || || || || ||||||||||| || | Sbjct 21795489 TGTCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTCTTGCCCGTCAAAGTCTTGA 21795548 Query 48754 CAAAAATCTGCATC 48767 |||| ||||||||| Sbjct 21795549 CAAATATCTGCATC 21795562 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| ||||| |||| | | | | Sbjct 3120956 AGACGCAAGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTG 3121015 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||||||||| || |||| | ||| || |||| || | |||||| Sbjct 3121016 CCGTCTTCAAGTTGCTTACCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCC 3121075 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | | || || ||||||||||| || Sbjct 3121076 TTGTCTTGGATTTTAGCTTTGACATTATCGATGGTGTCAGAGCTCTCCACCTCCAAAGTG 3121135 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATC 48761 || || ||||| |||||||| || || || ||| Sbjct 3121136 ATAGTCTTTCCAGTCAAAGTCTTGACGAAGATC 3121168 >seq17 Length=35492130 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||| ||||| | || ||| || || || |||||||||| Sbjct 33393496 CCACCTCTCAGACGAAGCACTAAATGCAAAGTTGACTCCTTCTGGATGTTGTAATCAGCA 33393437 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| | || || | |||||| || ||||| || |||| ||||||||||| || Sbjct 33393436 AGAGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATTAGTCTCTGTTGATCCGGAGGG 33393377 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| ||||| ||| ||| | | | ||||| ||| || Sbjct 33393376 ATGCCTTCCTTGTCCTGGATCTTAGCTTTAACATTGTCGATGGTGTCTGAACTCTCAACT 33393317 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| ||||| || || | || || || || |||||||| Sbjct 33393316 TCTAGGGTAATGGTTTTACCGGTTAGGGTCTTGACGAATATCTGCAT 33393270 >seq10 Length=25316904 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| |||||||||||||| | || | | ||| | || || | || || || ||||| Sbjct 18593314 CTCTTTCTGAATATTGTAATCCGCTAAAGTGCGACCATCTTCGAGTTGTTTTCCAGCAAA 18593373 Query 48635 TATCAGTCGCTGTTGATCC-GTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAG 48693 || |||| ||| || ||| |||||| | || || ||||| |||||| || ||| Sbjct 18593374 GATTAGTCTCTGCTGGTCCGGTGGGATC-CCTTCTTTGTCTTGAATCTTGGCCTTCACAT 18593432 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | | || || ||| ||||| | || || || || ||||||||||| || | Sbjct 18593433 TGTCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTCTTGCCCGTCAAAGTCTTGA 18593492 Query 48754 CAAAAATCTGCATC 48767 |||| ||||||||| Sbjct 18593493 CAAATATCTGCATC 18593506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380764836703476