Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq36 673 0.0 seq16 673 0.0 seq18 547 7e-151 seq4 309 3e-79 >seq36 Length=171746 Score = 673 bits (746), Expect = 0.0 Identities = 722/952 (76%), Gaps = 2/952 (0%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || ||||| || ||| | |||||||| ||| || ||| |||| || | || |||| Sbjct 56582 GGATGGTTCGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTTTTTATTAT 56524 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 ||||||| ||||||||||||| || || || || || || || ||||| ||| ||||||| Sbjct 56523 CGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 56464 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 ||| | ||||| ||||| || || || ||||| || |||| | ||| || ||||| Sbjct 56463 TCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGG 56404 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | || || ||||| ||||||||||| || || ||||||| ||||| ||||||||||| Sbjct 56403 TTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGG 56344 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588 |||||| | || | ||| | ||||| | ||||| || | ||||||||||||||| Sbjct 56343 TCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGA 56284 Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648 ||||||||| || ||| || || |||||||||||||| ||||||||| || ||||| Sbjct 56283 GTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 56224 Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708 |||||| ||||| ||||||| ||| | ||||||| ||||||| || || ||||| Sbjct 56223 TGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGA 56164 Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768 |||||||||||| || ||||| ||||| ||||||| |||| |||| |||||||||||||| Sbjct 56163 TGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCA 56104 Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828 |||||| || |||||||| || |||||| | ||||| |||||||| |||||||| || || Sbjct 56103 CAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCT 56044 Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888 ||| || ||||||||||| | || |||||| || | | || ||||| |||| Sbjct 56043 ATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 55984 Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948 || ||| || | || |||| ||||| |||||||| ||||||||||||||||| || Sbjct 55983 TGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGC 55924 Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008 ||||| || || ||||| || ||||||||||||||||| ||| ||||||||| | Sbjct 55923 TGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTC 55864 Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068 || ||||||||| | || || ||||| || || || || |||||||| || | || | Sbjct 55863 TTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTAT 55804 Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128 || |||||||||||||| ||||| ||||| |||||||| || | | || | || Sbjct 55803 TAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCA 55744 Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188 |||||| || | || || ||||| || | ||||||| || || ||||||||||| Sbjct 55743 AGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGT 55684 Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAG 9240 ||||| ||| | || || ||||||||||| || ||||| || |||| |||| Sbjct 55683 TATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 55632 Score = 583 bits (646), Expect = 1e-161 Identities = 728/998 (73%), Gaps = 0/998 (0%) Strand=Plus/Minus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || ||||| |||||||| ||||||||||| Sbjct 115915 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 115856 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | ||||| || ||| ||| | || | || || ||| | || || || || ||| Sbjct 115855 CTATTGCTTTTCCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 115796 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || ||||| ||||| || | || ||| || | || ||| ||||| | Sbjct 115795 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 115736 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || || || || || || |||||| || | | | |||||| | | |||| |||||| Sbjct 115735 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 115676 Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114 ||||| | || |||||||| || ||| || | || || || ||||||||||| Sbjct 115675 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGGCTTTTGTT 115616 Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174 || |||||||| || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 115615 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 115556 Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234 | || | | |||||||| ||||| ||||| || ||||| || |||||||||||||| Sbjct 115555 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 115496 Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294 ||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| || Sbjct 115495 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 115436 Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354 || || || || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 115435 GTAGCCGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 115376 Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414 || || |||||||||||||| || ||| ||||||| | ||| || |||| || || || Sbjct 115375 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 115316 Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474 || | ||||||||||| || | | | ||||||| || ||||| || ||| ||| Sbjct 115315 GGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 115256 Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534 ||| | ||||||| ||||| || ||||| ||||| || |||||||| || ||||| Sbjct 115255 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 115196 Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594 || || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||| Sbjct 115195 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 115136 Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654 || || | ||| | |||| | || ||||| | | ||||| ||| | || || ||| Sbjct 115135 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 115076 Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714 || || || || || || ||||| ||| | || | |||||||| ||||||||||| ||| Sbjct 115075 GCCTATGACTTCGTTTCCCAAGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTC 115016 Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774 ||||| || ||||| ||| | ||||||||| ||||||| |||||||| | || || Sbjct 115015 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 114956 Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 114955 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 114918 Score = 565 bits (626), Expect = 3e-156 Identities = 706/968 (73%), Gaps = 0/968 (0%) Strand=Plus/Plus Query 9845 GATCGCTTTGTTTTTGTGGGTTGGTCTGGACTACTTCTTTTTCCCACTGCTTATCTTGCA 9904 || ||||| |||||||| ||||||||||| ||| || || || ||| ||| | | Sbjct 48872 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATAGCTCTTCCCTTGTGCCTATTTCTCT 48931 Query 9905 ATTGGTGGCTGGCTTACTGGCACTACGTTTGTCACGAGTTGGTACACTCACGGACTTGCA 9964 | || || ||| | || || || || ||||| || ||||| ||||| || | || Sbjct 48932 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGGTTGGCC 48991 Query 9965 AGTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCT 10024 ||| || | || ||| ||||| | || || || || || || |||||| || | Sbjct 48992 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 49051 Query 10025 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGG 10084 | | |||||| | | |||| ||||||||||| | || |||||||| || ||| Sbjct 49052 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 49111 Query 10085 ATCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGC 10144 || | || || || ||||||||||| || |||||||| || ||||| ||||| || Sbjct 49112 TGTCAATTAGGTGGTCTGTGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 49171 Query 10145 TTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATC 10204 ||||||||||| || ||||| || || ||| || | | |||||||| ||||| ||| Sbjct 49172 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATC 49231 Query 10205 GCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAG 10264 || || ||||| || |||||||||||||| ||| ||||| || |||||||| || || Sbjct 49232 GCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAA 49291 Query 10265 TCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTC 10324 ||| |||||||||||||||| ||||| || || || || || || || ||| | ||||| Sbjct 49292 TCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCCGCTATATTTCGATTCATCCTCTTT 49351 Query 10325 CTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGCTGGTATA 10384 |||| || |||||||||||||| | || || || |||||||||||||| || ||| || Sbjct 49352 TTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTA 49411 Query 10385 CTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACACTTTATCAA 10444 ||||| | ||| || |||| || || || || | ||||||||||| || | | | || Sbjct 49412 CTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAA 49471 Query 10445 GATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAAGAAGAGACCTAT 10504 ||||| || ||||| || ||| |||||| | ||||||| ||||| || ||| Sbjct 49472 GATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTAT 49531 Query 10505 TCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAA 10564 || ||||| || |||||||| || ||||| || || ||||| |||||||| ||||||| Sbjct 49532 TCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAA 49591 Query 10565 CGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATT 10624 || ||| | |||||||||||| | |||||||| || | ||| | |||| | || || Sbjct 49592 CGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTT 49651 Query 10625 GGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAGATCAGG 10684 ||| | | ||||| ||| | || || ||||| || || || || || ||||| ||| | Sbjct 49652 GGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAATCCGT 49711 Query 10685 GCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTCTGAACGAAGGT 10744 || | |||||||| ||||||||||| |||||||| || ||||| ||| | ||||||||| Sbjct 49712 GCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGT 49771 Query 10745 CTTCGTGCATGGATGGCACCAGTTGACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAA 10804 ||||||| |||||||| | || || || || |||| | || | ||||| || || Sbjct 49772 ATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAG 49831 Query 10805 GTTCTTCC 10812 ||||| || Sbjct 49832 GTTCTACC 49839 Score = 329 bits (364), Expect = 3e-85 Identities = 441/612 (72%), Gaps = 1/612 (0%) Strand=Plus/Plus Query 10196 AATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCA 10255 ||||| ||||| || ||| | || |||||||||||||| | | ||||| | ||||| Sbjct 50662 AATGCAATCGCATTCTCTAGTCCCATTGCTGTTTTTGTTTCTATCTTCCTACTTAATCCA 50721 Query 10256 CTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTC 10315 || | | ||| | |||||||||||||| ||||| || || | | || || || ||| Sbjct 50722 CTAAGTCGATCTGGCTGGTTCTTTGCGCCTAGTTTTGGTGTAGTCTCTATATTTCGATTC 50781 Query 10316 CTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTT 10375 || || |||| || ||||||||||||| | || || || |||||||||||||| Sbjct 50782 AC-CTATTTTTCCAAGGGTTTCATAATTGGAAATTGAACCCATTTCATATGATGGGAGTC 50840 Query 10376 GCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACA 10435 || ||| ||||||| | ||| || |||| | || || || | ||||||||||| || Sbjct 50841 GCCGGTGTACTGGGCGCGGCTCTGCTATGCACTATTCATGGTGCTACTGTAGAAAATACT 50900 Query 10436 CTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAAGAA 10495 | | | ||||||| || ||||| || ||| |||||| | ||||||| ||| Sbjct 50901 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAA 50960 Query 10496 GAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTT 10555 || || ||||| ||||| || |||||||| || ||||| || || ||||| |||||||| Sbjct 50961 GAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTT 51020 Query 10556 AGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACC 10615 ||||||||| ||| | |||||||||||| | |||||||| || | ||| | |||| Sbjct 51021 TCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATG 51080 Query 10616 TCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAA 10675 | || ||||| | | || || ||| | || || ||||| || || ||||| || || Sbjct 51081 AGTGCTCTTGGAGTAGTCGGCCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCCAG 51140 Query 10676 GAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTCTG 10735 || ||| | | |||||||| |||||| |||| |||||||| || ||||| ||| | Sbjct 51141 GAAATCTGTGTAGTGGAAGATCCGGAATTTAAGACTTTCTATACTAAAAATATTCTTTTA 51200 Query 10736 AACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCACACGAAAGCTTTGTTTTC 10795 ||||||||| ||||||| ||| ||| | || || || || |||| | || | ||| Sbjct 51201 AACGAAGGTATTCGTGCTTGGCTGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTC 51260 Query 10796 CCAGAAGAAGTT 10807 || || || ||| Sbjct 51261 CCTGAGGAGGTT 51272 >seq16 Length=29110212 Score = 673 bits (746), Expect = 0.0 Identities = 722/952 (76%), Gaps = 2/952 (0%) Strand=Plus/Plus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || ||||| || ||| | |||||||| ||| || ||| |||| || | || |||| Sbjct 16535172 GGATGGTTCGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTTTTTATTAT 16535230 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 ||||||| ||||||||||||| || || || || || || || ||||| ||| ||||||| Sbjct 16535231 CGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 16535290 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 ||| | ||||| ||||| || || || ||||| || |||| | ||| || ||||| Sbjct 16535291 TCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGG 16535350 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | || || ||||| ||||||||||| || || ||||||| ||||| ||||||||||| Sbjct 16535351 TTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGG 16535410 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588 |||||| | || | ||| | ||||| | ||||| || | ||||||||||||||| Sbjct 16535411 TCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGA 16535470 Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648 ||||||||| || ||| || || |||||||||||||| ||||||||| || ||||| Sbjct 16535471 GTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 16535530 Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708 |||||| ||||| ||||||| ||| | ||||||| ||||||| || || ||||| Sbjct 16535531 TGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGA 16535590 Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768 |||||||||||| || ||||| ||||| ||||||| |||| |||| |||||||||||||| Sbjct 16535591 TGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCA 16535650 Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828 |||||| || |||||||| || |||||| | ||||| |||||||| |||||||| || || Sbjct 16535651 CAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCT 16535710 Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888 ||| || ||||||||||| | || |||||| || | | || ||||| |||| Sbjct 16535711 ATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 16535770 Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948 || ||| || | || |||| ||||| |||||||| ||||||||||||||||| || Sbjct 16535771 TGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGC 16535830 Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008 ||||| || || ||||| || ||||||||||||||||| ||| ||||||||| | Sbjct 16535831 TGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTC 16535890 Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068 || ||||||||| | || || ||||| || || || || |||||||| || | || | Sbjct 16535891 TTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTAT 16535950 Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128 || |||||||||||||| ||||| ||||| |||||||| || | | || | || Sbjct 16535951 TAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCA 16536010 Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188 |||||| || | || || ||||| || | ||||||| || || ||||||||||| Sbjct 16536011 AGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGT 16536070 Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAG 9240 ||||| ||| | || || ||||||||||| || ||||| || |||| |||| Sbjct 16536071 TATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 16536122 >seq18 Length=20869551 Score = 547 bits (606), Expect = 7e-151 Identities = 572/751 (76%), Gaps = 0/751 (0%) Strand=Plus/Minus Query 8490 GGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAGCTTGTAGTTTT 8549 |||||| || || ||||||| ||||| |||||||||||||||| | || | ||| | Sbjct 2057535 GGAAGCTGCATCCGTTGATGAATGGCTACACAACGGTGGTCCTTATGAACTAATTGTTCT 2057476 Query 8550 CCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTTTCTTACCGCCT 8609 ||||| | ||||| || | ||||||||||||||| ||||||||| || ||| || Sbjct 2057475 ACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 2057416 Query 8610 TGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCTGCTTCTGCTGT 8669 || |||||||||||||| ||||||||| || ||||||||||| | ||| ||||||| Sbjct 2057415 GGGTATGCGTCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGTTGCGACTGCTGT 2057356 Query 8670 ATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCTCTTGGTATCTC 8729 ||| | ||||||| ||||||| || || ||||||||||||||||| || ||||| Sbjct 2057355 TTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 2057296 Query 8730 CGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTGATGCACCCCTT 8789 ||||| ||||||| |||| |||| |||||||||||||||||||| || |||||||| || Sbjct 2057295 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 2057236 Query 8790 CCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCAATGCATGGTTC 8849 |||||| | ||||| |||||||| |||||||| || || ||| || ||||||||||| Sbjct 2057235 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 2057176 Query 8850 ACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAAAACTATGGCTA 8909 | || |||||| || | | || ||||| |||| || ||| || | || || Sbjct 2057175 CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 2057116 Query 8910 CAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTTGGTCG 8969 || ||||| |||||||| ||||||||||||||||| || ||||| || || ||||| || Sbjct 2057115 CAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCG 2057056 Query 8970 CTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGC 9029 ||||||||||||||||| ||| ||||||||| | || ||||||||| | || || Sbjct 2057055 ATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGC 2056996 Query 9030 GTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTCAACCT 9089 ||||| || || || || |||||||| || | || | || |||||||||||||| Sbjct 2056995 TTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCT 2056936 Query 9090 CAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTGCTCAACACCTG 9149 ||||| ||||| |||||||| || | | || | |||||||| || | || || || Sbjct 2056935 AAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTG 2056876 Query 9150 GGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAAAGAAACGCACA 9209 ||| || | ||||||| || || ||||||||||| ||||| ||| | || || || Sbjct 2056875 GGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 2056816 Query 9210 CAACTTCCCGCTTGACCTTGCGGCTGCTGAG 9240 ||||||||| || ||||| || |||| |||| Sbjct 2056815 CAACTTCCCTCTAGACCTAGCTGCTGTTGAG 2056785 Score = 241 bits (266), Expect = 1e-58 Identities = 273/366 (75%), Gaps = 0/366 (0%) Strand=Plus/Minus Query 8875 GAGACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACT 8934 || ||||| |||| || ||| || | || |||| ||||| |||||||| |||||| Sbjct 2056505 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 2056446 Query 8935 TACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTT 8994 ||||||||||| || ||||| || || ||||| || ||||||||||||||||| ||| Sbjct 2056445 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 2056386 Query 8995 AACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTT 9054 ||||||||| | || ||||||||| | || || ||||| || || || || |||||| Sbjct 2056385 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 2056326 Query 9055 ACCGCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCC 9114 || || | || | || |||||||||||||| ||||| ||||| |||||||| || Sbjct 2056325 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 2056266 Query 9115 ATTATCGACGGACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGA 9174 | | || | |||||||| || | || || ||||| || | ||||||| || Sbjct 2056265 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 2056206 Query 9175 CTCGGTATGGAAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCT 9234 || ||||||||||| ||||| ||| | || || ||||||||||| || ||||| || ||| Sbjct 2056205 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 2056146 Query 9235 GCTGAG 9240 | |||| Sbjct 2056145 GTTGAG 2056140 >seq4 Length=30110606 Score = 309 bits (342), Expect = 3e-79 Identities = 317/414 (77%), Gaps = 0/414 (0%) Strand=Plus/Minus Query 10188 GACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCA 10247 ||||||| ||||| ||||| || ||||| || |||||||||||||| ||| ||||| | Sbjct 15118883 GACCTTATAATGCAATCGCATTATCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAA 15118824 Query 10248 TCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTT 10307 | |||||||| || || ||| |||||||||||||||| ||||| || || || || || | Sbjct 15118823 TTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATAT 15118764 Query 10308 TCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGA 10367 | || ||| | ||||| |||| || |||||||||||||| | || || || ||||||| Sbjct 15118763 TTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGA 15118704 Query 10368 TGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAG 10427 ||||||| || ||| ||||||| | ||| || |||| || || || || | ||||||| Sbjct 15118703 TGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAG 15118644 Query 10428 AAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTC 10487 |||| || | | | ||||||| | ||||| || ||| |||||| | |||| Sbjct 15118643 AAAATACTTTATTTGAAGATGGTAATGGTGCAAATACATTCTGTGCTTTTAACCCAACTC 15118584 Query 10488 AAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAA 10547 ||| ||||| || ||||| ||||| || |||||||| || ||||| || || ||||| Sbjct 15118583 AAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGG 15118524 Query 10548 TTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTA 10601 |||||||| ||||||| | ||| | |||||||||||| | |||||||| |||| Sbjct 15118523 TTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGTACCAGTTA 15118470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516239759328000