Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq36 700 0.0 seq16 700 0.0 seq18 547 7e-151 seq4 230 3e-55 seq9 111 2e-19 seq7 102 9e-17 >seq36 Length=171746 Score = 700 bits (776), Expect = 0.0 Identities = 751/993 (76%), Gaps = 0/993 (0%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | |||||||| || ||||| ||||| |||| |||||||| || || Sbjct 56624 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 56565 Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTTGGTGCTCCC 160995 ||||| || ||| | | || || | ||| || || || ||| ||| |||||| Sbjct 56564 ATGATCCCTACCTTATTGACCGCAACTTCTGTTTTTATTATCGCATTCATTGCTGCTCCT 56505 Query 160996 CCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAAC 161055 || || || || || || ||||||||||| || |||| || || | || |||||||| Sbjct 56504 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 56445 Query 161056 ATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATC 161115 || || || ||||| |||| ||| ||||| ||||| ||| |||| || ||||| ||| Sbjct 56444 ATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 56385 Query 161116 TGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTG 161175 |||||||| ||| | || |||||||| |||||||||||||||| |||| |||| Sbjct 56384 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 56325 Query 161176 TTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGT 161235 | ||||| | |||| | | ||| ||||||||||||||||||||| || |||| Sbjct 56324 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 56265 Query 161236 CTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCA 161295 ||||| ||||||||||||||| || ||||| || |||||||| || || |||| ||| Sbjct 56264 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 56205 Query 161296 GTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATC 161355 || ||| || ||||||| | ||||| || ||| ||||||| |||||||| || ||| Sbjct 56204 GTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 56145 Query 161356 TCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCC 161415 |||||||| ||||||| ||| |||| ||||| || |||||||||||||| |||||||| Sbjct 56144 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 56085 Query 161416 TTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGT 161475 || || ||| | || ||||| ||||| || ||||| || || || ||||| ||||| ||| Sbjct 56084 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 56025 Query 161476 TCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGT 161535 || |||| || ||| || | | |||||||| ||||| || || || | ||| Sbjct 56024 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 55965 Query 161536 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGT 161595 |||| ||||| ||||||||||| || |||||||| || ||||| ||||| || || || Sbjct 55964 TACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 55905 Query 161596 CGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCT 161655 || |||| |||||||| ||| |||||||| || || || | || |||||| | || Sbjct 55904 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 55845 Query 161656 GCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAAC 161715 |||||||| || || || || ||||| ||||| | || | || || ||||| |||||| Sbjct 55844 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 55785 Query 161716 CTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACC 161775 || ||||||||||| |||||||| || | ||||||||||| || ||||| || || Sbjct 55784 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 55725 Query 161776 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCT 161835 ||||| || || | ||||||||| ||||| |||||||| ||||| || || |||||| Sbjct 55724 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 55665 Query 161836 CACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 161868 |||||||||||||| ||||| ||||||| |||| Sbjct 55664 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 55632 Score = 536 bits (594), Expect = 1e-147 Identities = 729/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || ||||| ||||||||||| || |||||||| Sbjct 115915 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 115856 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | ||||| || ||| ||| | ||| | ||||||||| | || || || || || Sbjct 115855 CTATTGCTTTTCCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 115796 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296 || || ||||||||||| || | || ||||||||| | || ||| || ||| | Sbjct 115795 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 115736 Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356 || || |||||||||||||| || | | | | |||||| | || | || |||||| Sbjct 115735 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 115676 Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416 ||||| | ||||| || || | || ||||| ||| | || || || ||| ||||||| Sbjct 115675 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGGCTTTTGTT 115616 Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476 || |||||||| || || ||| | |||||||| ||| | || || |||||||| || ||| Sbjct 115615 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 115556 Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535 || || | | || ||||| ||||| || || ||||| ||||| |||||||| || || Sbjct 115555 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 115497 Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595 | ||| || || || ||||| | || ||||| |||||||| || || || || Sbjct 115496 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 115437 Query 162596 GGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAA 162655 || || || || || |||||| | ||||| |||||||||| ||||| ||||| | || Sbjct 115436 TGTAGCCGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 115377 Query 162656 TCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCA 162715 || ||||| |||||||| || || ||| | || || | || |||| | |||||||| Sbjct 115376 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 115317 Query 162716 TGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGC 162775 ||| | || || |||||||| | | |||||||| || ||||| || || || Sbjct 115316 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 115257 Query 162776 ATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTC 162835 ||| || | || || | |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 115256 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 115197 Query 162836 ACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGT 162895 ||| || || || |||||||| || || |||||||| |||||||||||| | ||||| Sbjct 115196 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 115137 Query 162896 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCG 162955 || || | ||| | |||| ||| || | || | | || || ||| | || || || Sbjct 115136 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 115077 Query 162956 TGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTT 163015 ||| || ||||| || || |||||| | ||||| || ||||| || || |||||||| || Sbjct 115076 TGCCTATGACTTCGTTTCCCAAGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTT 115017 Query 163016 CTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCA 163075 |||||| || || |||||| | || ||||| |||| || ||| | || | || || Sbjct 115016 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 114957 Query 163076 ACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 |||||||| ||| || | |||||||| ||||| | ||| | || |||||||| Sbjct 114956 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 114903 Score = 520 bits (576), Expect = 1e-142 Identities = 709/987 (72%), Gaps = 2/987 (0%) Strand=Plus/Plus Query 162144 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 162203 || ||||| ||||||||||| || |||||||| || || || || ||| ||| | Sbjct 48869 AGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATAGCTCTTCCCTTGTGCCTATTTC 48928 Query 162204 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 162263 || | ||||||||| | || || || || || || || ||||||||||| || | Sbjct 48929 TCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGGTTG 48988 Query 162264 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 162323 || ||||||||| | || ||| || ||| | || || |||||||||||||| || | Sbjct 48989 GCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAAT 49048 Query 162324 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 162383 | | | |||||| | || | || ||||||||||| | ||||| || || | || Sbjct 49049 AGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 49108 Query 162384 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 162443 ||||| ||| | || || || ||| ||||||| || |||||||| || || ||| | ||| Sbjct 49109 TGGTGTCAATTAGGTGGTCTGTGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATA 49168 Query 162444 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 162502 ||||| ||| | || || |||||||| || ||| || || | | || ||||| ||||| Sbjct 49169 GGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGC 49227 Query 162503 TATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTGGG 162562 || || ||||| ||||| |||||||| || ||| ||| || || || ||||| | || Sbjct 49228 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 49287 Query 162563 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCT 162622 ||||| |||||||| || || || || || || || || || |||||| | || Sbjct 49288 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCCGCTATATTTCGATTCATCCT 49347 Query 162623 CTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCAGG 162682 ||| |||||||||| ||||| ||||| | || || ||||| |||||||| || || || Sbjct 49348 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 49407 Query 162683 TATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTA 162742 | | || || | || |||| | ||||||||||| | || || |||||||| | | Sbjct 49408 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 49467 Query 162743 CGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAAAC 162802 |||||||| || ||||| || || || ||| || | || || | |||||||| Sbjct 49468 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 49527 Query 162803 GTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAA 162862 ||||| ||||| || || |||||||| |||||||| || || || |||||||| || Sbjct 49528 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 49587 Query 162863 CAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTC 162922 || |||||||| |||||||||||| | ||||| || || | ||| | |||| ||| | Sbjct 49588 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 49647 Query 162923 TATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGT 162982 | | || | | || || ||| | || || ||||| || ||||| || || |||||| | Sbjct 49648 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAAT 49707 Query 162983 TCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGA 163042 ||||| || ||||| || || |||||||| |||||||| || || |||||| | || || Sbjct 49708 CCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 49767 Query 163043 AGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGA 163102 ||| |||| || ||| | || | || || |||||||| ||| || | |||||||| Sbjct 49768 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 49827 Query 163103 AGAGGTCTTGCCAAGAGGCAACGCTCT 163129 ||||| | ||| | || |||||||| Sbjct 49828 GGAGGTTCTACCACGTGGAAACGCTCT 49854 Score = 273 bits (302), Expect = 2e-68 Identities = 440/631 (70%), Gaps = 1/631 (0%) Strand=Plus/Plus Query 162498 AATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCT 162557 ||||| || || ||||| |||| |||||||| || ||| | | || || | |||| Sbjct 50662 AATGCAATCGCATTCTCTAGTCCCATTGCTGTTTTTGTTTCTATCTTCCTACTTAATCCA 50721 Query 162558 TTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTC 162617 | | | ||| ||||||||| || || || || || | | || || |||||| Sbjct 50722 CTAAGTCGATCTGGCTGGTTCTTTGCGCCTAGTTTTGGTGTAGTCTCTATATTTCGATTC 50781 Query 162618 CTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTA 162677 || || |||||||||| ||||| |||| | || || ||||| |||||||| || Sbjct 50782 AC-CTATTTTTCCAAGGGTTTCATAATTGGAAATTGAACCCATTTCATATGATGGGAGTC 50840 Query 162678 GCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACA 162737 || ||| | || || | || |||| | |||||||||| | || || |||||||| Sbjct 50841 GCCGGTGTACTGGGCGCGGCTCTGCTATGCACTATTCATGGTGCTACTGTAGAAAATACT 50900 Query 162738 CTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAA 162797 | | |||||||| || ||||| || || || ||| || | || || | ||| Sbjct 50901 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAA 50960 Query 162798 GAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTT 162857 ||||| ||||| ||||| || || |||||||| |||||||| || || || |||||||| Sbjct 50961 GAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTT 51020 Query 162858 AGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACA 162917 || || |||||||| |||||||||||| | ||||| || || | ||| | |||| Sbjct 51021 TCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATG 51080 Query 162918 AGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAA 162977 ||| || | || | | || || ||| | || || ||||| || |||||||| || || Sbjct 51081 AGTGCTCTTGGAGTAGTCGGCCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCCAG 51140 Query 162978 GAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTG 163037 ||| | ||| | ||||| || || ||| |||| |||||||| || || |||||| | Sbjct 51141 GAAATCTGTGTAGTGGAAGATCCGGAATTTAAGACTTTCTATACTAAAAATATTCTTTTA 51200 Query 163038 AATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTC 163097 || ||||| |||| || ||| | | | || || |||||||| ||| || | ||| Sbjct 51201 AACGAAGGTATTCGTGCTTGGCTGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTC 51260 Query 163098 CCTGAAGAGGTCTTGCCAAGAGGCAACGCTC 163128 ||||| ||||| | ||| | || ||||||| Sbjct 51261 CCTGAGGAGGTTGTACCACGTGGAAACGCTC 51291 >seq16 Length=29110212 Score = 700 bits (776), Expect = 0.0 Identities = 751/993 (76%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | |||||||| || ||||| ||||| |||| |||||||| || || Sbjct 16535130 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 16535189 Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTTGGTGCTCCC 160995 ||||| || ||| | | || || | ||| || || || ||| ||| |||||| Sbjct 16535190 ATGATCCCTACCTTATTGACCGCAACTTCTGTTTTTATTATCGCATTCATTGCTGCTCCT 16535249 Query 160996 CCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAAC 161055 || || || || || || ||||||||||| || |||| || || | || |||||||| Sbjct 16535250 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 16535309 Query 161056 ATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATC 161115 || || || ||||| |||| ||| ||||| ||||| ||| |||| || ||||| ||| Sbjct 16535310 ATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 16535369 Query 161116 TGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTG 161175 |||||||| ||| | || |||||||| |||||||||||||||| |||| |||| Sbjct 16535370 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 16535429 Query 161176 TTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGT 161235 | ||||| | |||| | | ||| ||||||||||||||||||||| || |||| Sbjct 16535430 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 16535489 Query 161236 CTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCA 161295 ||||| ||||||||||||||| || ||||| || |||||||| || || |||| ||| Sbjct 16535490 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 16535549 Query 161296 GTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATC 161355 || ||| || ||||||| | ||||| || ||| ||||||| |||||||| || ||| Sbjct 16535550 GTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 16535609 Query 161356 TCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCC 161415 |||||||| ||||||| ||| |||| ||||| || |||||||||||||| |||||||| Sbjct 16535610 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 16535669 Query 161416 TTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGT 161475 || || ||| | || ||||| ||||| || ||||| || || || ||||| ||||| ||| Sbjct 16535670 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 16535729 Query 161476 TCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGT 161535 || |||| || ||| || | | |||||||| ||||| || || || | ||| Sbjct 16535730 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 16535789 Query 161536 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGT 161595 |||| ||||| ||||||||||| || |||||||| || ||||| ||||| || || || Sbjct 16535790 TACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 16535849 Query 161596 CGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCT 161655 || |||| |||||||| ||| |||||||| || || || | || |||||| | || Sbjct 16535850 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 16535909 Query 161656 GCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAAC 161715 |||||||| || || || || ||||| ||||| | || | || || ||||| |||||| Sbjct 16535910 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 16535969 Query 161716 CTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACC 161775 || ||||||||||| |||||||| || | ||||||||||| || ||||| || || Sbjct 16535970 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 16536029 Query 161776 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCT 161835 ||||| || || | ||||||||| ||||| |||||||| ||||| || || |||||| Sbjct 16536030 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 16536089 Query 161836 CACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 161868 |||||||||||||| ||||| ||||||| |||| Sbjct 16536090 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 16536122 Score = 102 bits (112), Expect = 9e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 158325 GTGTGAAGACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTA 158384 |||||| |||||| ||| | ||||| || ||||||||||| || |||| | ||| Sbjct 27107521 GTGTGACGACGACGTCTACGTTCTTGATGCCGCTGAGGAAGCTGGAATCGACTTGCCTTA 27107580 Query 158385 CTCGTGCCGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGA 158444 ||| |||||||| || |||||||| ||||| || ||| | ||||| | || || Sbjct 27107581 CTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAAAGTTACGTCTGGATCTGTTGA 27107640 Query 158445 CCAAAGCGACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTG 158504 ||| |||||| ||||| || |||||||| || | | || || |||| ||||| Sbjct 27107641 CCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGGCTGAAGGGTTTGTTCTCACTTG 27107700 Query 158505 TGTTTCTTATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555 ||| | || ||||| |||| | ||||| || |||| ||||| || Sbjct 27107701 TGTGGCGTACCCTACTTCTGATGTTACCATTGAAACCCACAAAGAAGACGA 27107751 >seq18 Length=20869551 Score = 547 bits (606), Expect = 7e-151 Identities = 572/751 (76%), Gaps = 0/751 (0%) Strand=Plus/Minus Query 161118 GGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTGTT 161177 |||||| ||| | || |||||||| ||||||||||||||| |||| |||| | Sbjct 2057535 GGAAGCTGCATCCGTTGATGAATGGCTACACAACGGTGGTCCTTATGAACTAATTGTTCT 2057476 Query 161178 CCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCT 161237 ||||| | |||| | | ||| ||||||||||||||||||||| || |||||| Sbjct 2057475 ACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 2057416 Query 161238 GGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGT 161297 ||| ||||||||||||||| || ||||| || |||||||| || | |||| ||| || Sbjct 2057415 GGGTATGCGTCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGTTGCGACTGCTGT 2057356 Query 161298 GTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTC 161357 ||| || ||||||| | ||||| || ||| ||||||| |||||||| || ||||| Sbjct 2057355 TTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 2057296 Query 161358 TGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTT 161417 |||||| ||||||| ||| |||| ||||| || |||||||||||||| |||||||| || Sbjct 2057295 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 2057236 Query 161418 CCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTC 161477 || ||| | || ||||| ||||| || ||||| || || || ||||| ||||| ||||| Sbjct 2057235 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 2057176 Query 161478 GCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTA 161537 |||| || ||| || | | |||||||| ||||| || || || | ||||| Sbjct 2057175 CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 2057116 Query 161538 CAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCG 161597 || ||||| ||||||||||| || |||||||| || ||||| ||||| || || || || Sbjct 2057115 CAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCG 2057056 Query 161598 TCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGC 161657 |||| |||||||| ||| |||||||| || || || | || |||||| | || || Sbjct 2057055 ATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGC 2056996 Query 161658 TTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCT 161717 |||||| || || || || ||||| ||||| | || | || || ||||| |||||||| Sbjct 2056995 TTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCT 2056936 Query 161718 GAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTG 161777 ||||||||||| |||||||| || | ||||||||||| || ||||| || || || Sbjct 2056935 AAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTG 2056876 Query 161778 GGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCA 161837 ||| || || | ||||||||| ||||| |||||||| ||||| || || |||||||| Sbjct 2056875 GGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 2056816 Query 161838 CAACTTCCCTCTTGACCTTGCTGCTGCTGAG 161868 |||||||||||| ||||| ||||||| |||| Sbjct 2056815 CAACTTCCCTCTAGACCTAGCTGCTGTTGAG 2056785 Score = 282 bits (312), Expect = 5e-71 Identities = 282/366 (77%), Gaps = 0/366 (0%) Strand=Plus/Minus Query 161503 GAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 161562 |||||||| ||||| || || || | ||||||| ||||| ||||||||||| || Sbjct 2056505 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 2056446 Query 161563 TACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGCTTCCTTC 161622 |||||||| || ||||| ||||| || || || || |||| |||||||| ||| ||| Sbjct 2056445 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 2056386 Query 161623 AACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTC 161682 ||||| || || || | || |||||| | || |||||||| || || || || ||||| Sbjct 2056385 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 2056326 Query 161683 ACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAACCAGTCT 161742 ||||| | || | || || ||||| |||||||| ||||||||||| |||||||| || Sbjct 2056325 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 2056266 Query 161743 ATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACCGTGCTGGT 161802 | ||||||||||| || ||||| || || ||||| || || | ||||||||| Sbjct 2056265 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 2056206 Query 161803 CTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACCTTGCTGCT 161862 ||||| |||||||| ||||| || || |||||||||||||||||||| ||||| |||||| Sbjct 2056205 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 2056146 Query 161863 GCTGAG 161868 | |||| Sbjct 2056145 GTTGAG 2056140 >seq4 Length=30110606 Score = 230 bits (254), Expect = 3e-55 Identities = 297/410 (72%), Gaps = 0/410 (0%) Strand=Plus/Minus Query 162492 CCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATC 162551 ||||| ||||| || || || || ||||| |||||||| || ||| ||| || || || Sbjct 15118881 CCTTATAATGCAATCGCATTATCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATT 15118822 Query 162552 TATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTC 162611 ||||| | || ||||| |||||||| || || || || || ||||| || || Sbjct 15118821 TATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTT 15118762 Query 162612 CGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATG 162671 |||||| | ||||| |||||||||| ||||| ||||| | || || ||||| |||||| Sbjct 15118761 CGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATG 15118702 Query 162672 GGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAA 162731 || || || ||| | || || | || |||| | ||||||||||| | || || ||| Sbjct 15118701 GGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAA 15118642 Query 162732 AATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAG 162791 ||||| | | |||||||| | ||||| || || || ||| || | || || Sbjct 15118641 AATACTTTATTTGAAGATGGTAATGGTGCAAATACATTCTGTGCTTTTAACCCAACTCAA 15118582 Query 162792 GAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATT 162851 | |||||||| ||||| ||||| || || |||||||| |||||||| || || || || Sbjct 15118581 GCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTT 15118522 Query 162852 GCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGT 162901 |||||| || || ||||||| |||||||||||| | ||||| || || Sbjct 15118521 GCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGTACCAGT 15118472 >seq9 Length=38094978 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 158325 GTGTGAAGACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTA 158384 |||||| |||||| ||| | ||||| || ||||||||||| || |||| | ||| Sbjct 36084666 GTGTGACGACGACATCTACGTTCTTGATGCCGCTGAGGAAGCTGGAATCGACTTGCCTTA 36084725 Query 158385 CTCGTGCCGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGA 158444 ||| |||||||| || |||||||| || || || ||| | || ||||| | || || Sbjct 36084726 CTCTTGCCGTGCTGGTTCTTGTTCGAGCTGCGCTGGTAAAGTTGTGTCTGGATCTGTTGA 36084785 Query 158445 CCAAAGCGACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTG 158504 ||| |||||| ||||| || |||||||| || || || || |||| ||||| Sbjct 36084786 CCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGAATGAAGGGTTTGTTCTCACTTG 36084845 Query 158505 TGTTTCTTATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555 ||| |||| ||||| |||| | ||||| || |||| ||||| || Sbjct 36084846 TGTGGCTTACCCTACTTCTGATGTTACCATTGAAACCCACAAAGAAGACGA 36084896 >seq7 Length=33617777 Score = 102 bits (112), Expect = 9e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 158325 GTGTGAAGACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTA 158384 |||||| |||||| ||| | ||||| || ||||||||||| || |||| | ||| Sbjct 31470572 GTGTGACGACGACGTCTACGTTCTTGATGCCGCTGAGGAAGCTGGAATCGACTTGCCTTA 31470631 Query 158385 CTCGTGCCGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGA 158444 ||| |||||||| || |||||||| ||||| || ||| | ||||| | || || Sbjct 31470632 CTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAAAGTTACGTCTGGATCTGTTGA 31470691 Query 158445 CCAAAGCGACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTG 158504 ||| |||||| ||||| || |||||||| || | | || || |||| ||||| Sbjct 31470692 CCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGGCTGAAGGGTTTGTTCTCACTTG 31470751 Query 158505 TGTTTCTTATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555 ||| | || ||||| |||| | ||||| || |||| ||||| || Sbjct 31470752 TGTGGCGTACCCTACTTCTGATGTTACCATTGAAACCCACAAAGAAGACGA 31470802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547492415389920