Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq12 136 7e-27 seq17 131 3e-25 seq20 127 4e-24 seq11 127 4e-24 seq13 118 2e-21 seq10 118 2e-21 seq8 113 8e-20 seq14 105 1e-17 seq3 100 5e-16 seq1 89.7 9e-13 >seq12 Length=33044737 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || || | || ||||| | ||| | |||||| || ||||||||| Sbjct 24357906 ATGCCACCTCTCAGACGAAGAACCAAATGCAGAGTTGACTCTTTCTGGATGTTATAATCT 24357965 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||| | ||| | || || | ||| || ||||| || || | ||||||||||||||| Sbjct 24357966 GCTAAGGTTCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCAGGA 24358025 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 ||||| ||||| || ||||| || || || ||||| || || || || ||| Sbjct 24358026 GGTATCCCTTCCTTGTCTTGAATCTTCGCCTTGACATTGTCAATGGTGTCAGAGCTTTCA 24358085 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||||||||||||||| || || | ||||| | ||||| ||||| Sbjct 24358086 ACTTCTAGAGTAATGGTTTTTCCGGTGAGGGTTTTCACAAATATTTGCAT 24358135 >seq17 Length=35492130 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | |||||||| ||||| | ||| || || || ||||| Sbjct 33393499 ATACCACCTCTCAGACGAAGCACTAAATGCAAAGTTGACTCCTTCTGGATGTTGTAATCA 33393440 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | || || |||||||| |||| ||||||||| || || Sbjct 33393439 GCAAGAGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATTAGTCTCTGTTGATCCGGA 33393380 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || ||| ||| ||||| || || ||||| || Sbjct 33393379 GGGATGCCTTCCTTGTCCTGGATCTTAGCTTTAACATTGTCGATGGTGTCTGAACTCTCA 33393320 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| |||||||||||||| |||| || || | |||||||||||| Sbjct 33393319 ACTTCTAGGGTAATGGTTTTACCGGTTAGGGTCTTGACGAATATCTGCAT 33393270 Score = 102 bits (112), Expect = 1e-16 Identities = 115/153 (75%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 ||||| ||||||| ||||| | || || || || | ||| | |||||| || || | Sbjct 21241176 TCATAGTACCACCCCTAAGCCTCAACACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGT 21241235 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 | || | ||| | ||| | || || | ||||||||||||||| || || |||||||| | Sbjct 21241236 AGTCAGCTAACGTTCGACCATCTTCAAGTTGTTTACCAGCAAAGATCAACCTCTGTTGAT 21241295 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||||||||| || ||||| || ||| |||||| Sbjct 21241296 CAGGTGGTATCCCCTCTTTGTCCTGT-TTTTAT 21241327 >seq20 Length=30099736 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || ||||| | ||| | |||||| ||||| ||||| Sbjct 11036404 ATACCACCTCTCAGACGAAGCACCAAATGGAGAGTCGACTCTTTCTGGATATTGTAATCA 11036463 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | || ||||| ||||| || | ||||||||||| ||| Sbjct 11036464 GCCAAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGT 11036523 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||||||||| || ||| ||| ||||| ||||||||||| || Sbjct 11036524 GGGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATAGTATCTGAGCTCTCA 11036583 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| ||||||||||| || | || |||| || || ||||| Sbjct 11036584 ACCTCCAAAGTGATGGTTTTACCGGTGAGAGTCTTAACAAAGATTTGCAT 11036633 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || ||||| | || | |||||| ||||| || || Sbjct 11036632 ATACCACCTCTCAGACGAAGCACCAAATGGAGGGTCGACTCTTTTTGGATATTGTAGTCA 11036691 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || | | |||| || | || |||||||| || || | ||||| ||||| ||| Sbjct 11036692 GCAAGAGTCCTTCCGTCCTCAAGCTGCTTACCAGCGAATATAAGCCTCTGCTGGTCCGGT 11036751 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| ||||| || || ||| || || ||||||||||| || Sbjct 11036752 GGGATTCCCTCTTTGTCTTGAATCTTGGCTTTGACGTTGTCAATAGTATCTGAGCTCTCA 11036811 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||||||| || ||||| || || || || || | || |||||||| Sbjct 11036812 ACCTCTAGAGTGATTGTTTTGCCTGTCAACGTCTTGACAAAGATCTGCAT 11036861 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || || | ||| | |||||| ||||| || || Sbjct 14739891 ATACCACCACGAAGACGAAGCACCAAGTGGAGAGTGGACTCTTTCTGGATATTGTAGTCA 14739832 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | | | || || | || ||||| ||||| || | ||||| || || ||| Sbjct 14739831 GCGAGTGTATGACCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGT 14739772 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || |||||||| || || ||| ||| ||||| |||||||| || || Sbjct 14739771 GGGATCCCCTCTTTATCCTGGATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCA 14739712 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| |||||||||||||| || || || | || |||||||| Sbjct 14739711 ACCTCGAGAGTGATGGTTTTACCAGTCAACGTCTTCACAAAGATCTGCAT 14739662 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||||| | || || | || || | ||||| ||||| || || | |||| Sbjct 11035996 ATGTTGTAATCTGCAAGAGTCCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTC 11036055 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| ||||| || ||||| || || || || ||| ||| || ||| ||||| Sbjct 11036056 TGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCTTTAACGTTATCAATAGTG 11036115 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| || ||||| | ||||||||| || || || | || || | || || ||| Sbjct 11036116 TCTGAGCTCTCCACTTCCAAAGTAATGGTCTTGCCGGTAAGGGTCTTCACAAAAATTTGC 11036175 Query 172068 AT 172069 || Sbjct 11036176 AT 11036177 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || || || | || | ||||| ||| || ||||| Sbjct 11036860 ATACCACCTCTTAAACGGAGAACCAAGTGGAGTGTTGATTCTTTCTGAATGTTGTAATCA 11036919 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | |||||||| ||||| || ||||| || || || || Sbjct 11036920 GCCAAGGTGCGGCCATCTTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGA 11036979 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || ||| || ||||| || || || || || Sbjct 11036980 GGAATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCG 11037039 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||| |||||||| | |||||| | ||| || ||||| Sbjct 11037040 ACCTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 11037089 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || || || | || | ||||| || || |||||| Sbjct 14739663 ATACCACCTCTTAAACGAAGAACCAAGTGAAGTGTTGATTCTTTCTGGATGTTGTAATCT 14739604 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | |||||||||||||| || ||||| || || || || Sbjct 14739603 GCCAAGGTACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAATCTTTGCTGATCCGGA 14739544 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || || || ||||| || || || || || Sbjct 14739543 GGAATCCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 14739484 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || ||||| | |||||| | ||| || ||||| Sbjct 14739483 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 14739434 >seq11 Length=49703607 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || || | || ||||| | ||| | | |||| || ||||||||| Sbjct 21795788 ATGCCACCTCTCAGACGAAGAACCAAATGCAGAGTTGACCCTTTCTGGATGTTATAATCT 21795847 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||| | ||| | || || | ||| || ||||| || || | |||||||||||| || Sbjct 21795848 GCTAAGGTTCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGA 21795907 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || ||||| || || || ||||| || || || || ||| Sbjct 21795908 GGGATTCCTTCCTTGTCTTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAGCTTTCA 21795967 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||||||||||||||| || || | ||||| | ||||| ||||| Sbjct 21795968 ACTTCTAGAGTAATGGTTTTTCCGGTGAGGGTTTTTACAAATATTTGCAT 21796017 Score = 114 bits (126), Expect = 2e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931 ||| | |||||| |||||| ||||| | ||||| || | || || | |||||| || Sbjct 21795364 AGTTGACTCTTTCTGAATATTGTAATCCGCTAAAGTGCGACCATCTTCGAGTTGTTTTCC 21795423 Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991 ||||| |||| |||||| ||||| ||||| || |||||||| ||||| || || || Sbjct 21795424 GGCAAAGATTAGTCTCTGCTGGTCCGGTGGGATCCCTTCTTTGTCTTGAATCTTGGCCTT 21795483 Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051 ||||| || ||||| || || || |||||||| ||||| || || || || || Sbjct 21795484 CACATTGTCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTCTTGCCCGTCAAAGT 21795543 Query 172052 TTTAATGAATATCTGCAT 172069 || | ||||||||||| Sbjct 21795544 CTTGACAAATATCTGCAT 21795561 >seq13 Length=24101694 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || ||||| | ||| | |||||| ||||| ||||| Sbjct 9156990 ATACCACCTCTCAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAATCA 9157049 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | || ||||| ||||| || | ||||| ||||| ||| Sbjct 9157050 GCCAAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGT 9157109 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||||||||| || ||| ||| ||||| ||||||||||| || Sbjct 9157110 GGGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATAGTATCTGAGCTCTCA 9157169 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| || || |||||||| || | || || | || || ||||| Sbjct 9157170 ACCTCTAGGGTGATTGTTTTACCGGTGAGAGTCTTCACAAAGATTTGCAT 9157219 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || || || | ||||| |||||| ||||| || || Sbjct 11436761 ATACCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCA 11436702 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | || ||||| ||||| || | ||||| ||||| || Sbjct 11436701 GCTAGCGTGCGACCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 11436642 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || ||| ||| ||||| || ||||| || || Sbjct 11436641 GGAATCCCTTCTTTATCCTGAATCTTAGCTTTAACATTGTCAATCGTATCCGAACTCTCA 11436582 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||||||||||||| || || || | || |||||||| Sbjct 11436581 ACCTCGAGGGTGATGGTTTTACCAGTCAACGTCTTCACAAAGATCTGCAT 11436532 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | ||| | || || || | || | ||||| || || ||||| Sbjct 11436533 ATACCACCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCC 11436474 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | |||||||||||||| || || || || || || || Sbjct 11436473 GCCAAGGTACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAACCTTTGCTGATCCGGA 11436414 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || ||| || ||||| || || || || || Sbjct 11436413 GGGATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCAGAACTCTCA 11436354 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || ||||| | |||||| | ||| || ||||| Sbjct 11436353 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 11436304 >seq10 Length=25316904 Score = 118 bits (130), Expect = 2e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931 ||| | |||||| |||||| ||||| | ||||| || | || || | |||||| || Sbjct 18593308 AGTTGACTCTTTCTGAATATTGTAATCCGCTAAAGTGCGACCATCTTCGAGTTGTTTTCC 18593367 Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991 |||||| |||| |||||| ||||| ||||| || |||||||| ||||| || || || Sbjct 18593368 AGCAAAGATTAGTCTCTGCTGGTCCGGTGGGATCCCTTCTTTGTCTTGAATCTTGGCCTT 18593427 Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051 ||||| || ||||| || || || |||||||| ||||| || || || || || Sbjct 18593428 CACATTGTCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTCTTGCCCGTCAAAGT 18593487 Query 172052 TTTAATGAATATCTGCAT 172069 || | ||||||||||| Sbjct 18593488 CTTGACAAATATCTGCAT 18593505 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| || || | || ||||| | ||| | |||||| || ||||||||| Sbjct 18593732 ATGCCGCCTCTCAGACGAAGAACCAAATGCAGAGTTGACTCTTTCTGGATGTTATAATCT 18593791 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | ||| | || || | ||| || ||||| || || | |||||||||||| || Sbjct 18593792 GCTAGGGTTCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGA 18593851 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || ||||| || || || ||||| || || || || ||| Sbjct 18593852 GGGATTCCTTCCTTGTCTTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAGCTTTCA 18593911 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||||||||| ||||| || || | ||||| | ||||| ||||| Sbjct 18593912 ACTTCTAGAGTAATAGTTTTTCCGGTGAGGGTTTTTACAAATATTTGCAT 18593961 >seq8 Length=27720346 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || ||||| | || | |||||| ||||| ||||| Sbjct 6052397 ATACCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATATTGTAATCA 6052456 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | || ||||| ||||| || | ||||| || || ||| Sbjct 6052457 GCCAAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGT 6052516 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||||||||| || ||| ||| ||||| ||||||||||| || Sbjct 6052517 GGGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATAGTATCTGAGCTCTCA 6052576 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| ||||||||||| || | || |||| || || ||||| Sbjct 6052577 ACCTCCAAAGTGATGGTTTTACCGGTGAGAGTCTTAACAAAGATTTGCAT 6052626 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || || || | ||||| |||||| ||||| || || Sbjct 8687922 ATACCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCA 8687863 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | || ||||| ||||| || | ||||| ||||| || Sbjct 8687862 GCTAGCGTGCGACCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 8687803 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || ||| ||| ||||| |||||||| || || Sbjct 8687802 GGAATCCCTTCTTTATCCTGAATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCA 8687743 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||||||| ||||| || || || | || || ||||| Sbjct 8687742 ACCTCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATTTGCAT 8687693 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || | ||| | ||||| ||| || ||||| || || Sbjct 6052625 ATACCACCTCTCAGACGAAGCACAAGATGGAGAGTAGACTCCTTTTGGATATTGTAGTCA 6052684 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || | | |||| || | || |||||||| || || | ||||| ||||| ||| Sbjct 6052685 GCAAGAGTCCTTCCGTCCTCAAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGGTCCGGT 6052744 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||||||||| || || ||| ||||| || || || || || Sbjct 6052745 GGGATTCCCTCTTTATCTTGAATCTTTGCTTTGACATTGTCAATGGTGTCCGAGCTCTCA 6052804 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||||||| || || || || || | || |||||||| Sbjct 6052805 ACCTCGAGGGTGATGGTTTTGCCTGTCAACGTCTTGACAAAGATCTGCAT 6052854 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | ||| || | || || || | ||| | ||| || || || ||||||| Sbjct 6051944 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 6052003 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || || | || || | ||||| ||||| || || | |||||||||||| ||||| Sbjct 6052004 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 6052063 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||| || || || || ||| ||| || ||| ||||| ||||| || ||| Sbjct 6052064 ATCCCTTCCTTGTCCTGAATCTTAGCTTTAACGTTATCAATAGTGTCTGAGCTCTCAACT 6052123 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| ||||| ||||| || | || || | || |||||||| Sbjct 6052124 TCCAAAGTGATGGTCTTACCGGTAAGGGTCTTCACAAAAATCTGCAT 6052170 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | ||| | || || || | || | ||||| ||| || ||||| Sbjct 8687694 ATACCACCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCC 8687635 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | |||||||||||||| || || || || || || || Sbjct 8687634 GCCAAGGTACGACCATCCTCTAGCTGTTTACCAGCAAAGATCAACCTTTGCTGATCCGGA 8687575 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || ||| || ||||| || || || || || Sbjct 8687574 GGGATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCAGAACTCTCA 8687515 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || ||||| | |||||| | ||| || ||||| Sbjct 8687514 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 8687465 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || | ||| | ||||| ||| || ||||| || || Sbjct 6052169 ATACCACCACGGAGACGAAGCACAAGATGGAGAGTAGACTCCTTTTGGATATTGTAGTCA 6052228 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| | || || | ||||| |||||||| || | |||||| ||||||||| Sbjct 6052229 GCGAGGGTGCGTCCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCAGGT 6052288 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || ||| || || ||||| || Sbjct 6052289 GGGATCCCTTCCTTGTCTTGAATCTTTGCCTTGACGTTATCAATTGTGTCTGAGCTCTCA 6052348 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| || || || ||||||| || || | || |||||||| Sbjct 6052349 ACCTCCAAAGTGATAGTCTTGCCAGTTAGGGTCTTCACAAAAATCTGCAT 6052398 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || || || | || | ||| || ||| || ||||| Sbjct 26612535 ATACCACCTCTCAAACGAAGAACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCA 26612476 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | |||||||| || || || |||||||| ||||| || Sbjct 26612475 GCCAAGGTACGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGA 26612416 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || || || ||||| || || || || || Sbjct 26612415 GGAATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCGATGGTGTCAGAGCTCTCA 26612356 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || ||||| | |||||| | ||| || ||||| Sbjct 26612355 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 26612306 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||| || ||||| || | ||||| ||||| ||||| |||||||||||||| || || Sbjct 8688066 TGTTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCTTCTTTATCCTGGATC 8688007 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 ||| || |||||| ||||| ||||| || || || | ||| ||||| || || Sbjct 8688006 TTAGCCTTGACATTATCGATAGTGTCTGAACTCTCAACCTCCAAAGTGATGGTCTTTCCG 8687947 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | || || | || |||||||| Sbjct 8687946 GTCAGGGTCTTCACAAAAATCTGCAT 8687921 >seq14 Length=31758599 Score = 105 bits (116), Expect = 1e-17 Identities = 116/153 (76%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 ||||| ||||||| ||||| | || || || || | ||||| |||||| || || | Sbjct 16847560 TCATAGTACCACCCCTAAGCCTCAAGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGT 16847619 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 | || | ||| | ||| | || || | ||||||||||||||| || || |||||||| | Sbjct 16847620 AGTCAGCTAACGTTCGACCATCTTCGAGTTGTTTACCAGCAAAGATCAACCTCTGTTGAT 16847679 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||||||||| || ||||| || ||| |||||| Sbjct 16847680 CAGGTGGTATCCCCTCTTTGTCCTGT-TTTTAT 16847711 Score = 93.3 bits (102), Expect = 8e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||| || || || || | || ||||| | || | |||||| || || ||||| | Sbjct 11737845 ACCTCCCCTCAGACGCAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGC 11737786 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 || | || |||| |||| ||||| || ||||| || | | ||| || || ||||| Sbjct 11737785 TAGCGTTCTCCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAGACGCTGCTGATCCGGTGG 11737726 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| || ||||| || || ||| ||||| || || ||||| || || || Sbjct 11737725 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCAAC 11737666 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 ||||| || || || || || |||| ||||| | || ||||||||||| || Sbjct 11737665 CTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTTTTT 11737612 >seq3 Length=28500605 Score = 100 bits (110), Expect = 5e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| ||||||| ||||| | || || || || | ||||| |||||| || || | Sbjct 15298978 TCATGGTACCACCCCTAAGCCTCAAGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGT 15299037 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 | || | ||| | ||| | || || | ||||||||||||||| || || |||||||| | Sbjct 15299038 AGTCAGCTAACGTTCGACCATCTTCGAGTTGTTTACCAGCAAAGATCAACCTCTGTTGAT 15299097 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||||||||| || ||||| || ||| ||| || Sbjct 15299098 CAGGTGGTATCCCCTCTTTGTCCTGTTTTTAAT 15299130 Score = 93.3 bits (102), Expect = 8e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||| || || || || | || ||||| | || | |||||| || || ||||| | Sbjct 10831929 ACCTCCCCTCAGACGCAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAATCGGC 10831870 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 || | || |||| |||| ||||| || ||||| || | | ||| || || ||||| Sbjct 10831869 TAGCGTTCTCCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAGACGCTGCTGATCCGGTGG 10831810 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| || ||||| || || ||| ||||| || || ||||| || || || Sbjct 10831809 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCAAC 10831750 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 ||||| || || || || || |||| ||||| | || ||||||||||| || Sbjct 10831749 CTCTAGTGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTTTTT 10831696 >seq1 Length=23241285 Score = 89.7 bits (98), Expect = 9e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 171926 TTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTT 171985 ||||||| |||| || | |||| ||||||| | ||||||||||| || ||||| || || Sbjct 3747162 TTTACCACCAAAGATAAGTCTCCGTTGGTCCAGAGGTATTCCTTCCTTGTCTTGGATCTT 3747221 Query 171986 ATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 | | ||| || ||||| ||||| || |||||||| |||||||||||| | Sbjct 3747222 AGCTGCAACACTATCAATAGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTTTTAGAGGC 3747281 Query 172046 TAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||||||| || Sbjct 3747282 ATGGGTTTTAACGAATATCTGTAT 3747305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904714975989600