Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq20 127 6e-24 seq8 114 4e-20 seq13 109 2e-18 seq18 104 7e-17 seq11 104 7e-17 seq17 102 2e-16 seq14 102 2e-16 seq3 98.7 3e-15 seq1 86.0 2e-11 seq7 84.2 6e-11 seq5 84.2 6e-11 >seq20 Length=30099736 Score = 127 bits (140), Expect = 6e-24 Identities = 360/543 (66%), Gaps = 20/543 (4%) Strand=Plus/Minus Query 288817 CCAGATACATCAGGCAAACCCACCCGCACCCTCCTATCAAACCTACCAGAACGAGTTAAT 288876 |||| |||||||||| | |||| || || ||||| ||||| | | | ||| Sbjct 21057884 CCAGCTACATCAGGCCTATCCACTGTGACTTGCCGGTCAAATCTACCTGGTCTAAGCAAT 21057825 Query 288877 GCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGT-TTG 288935 || | ||| | | ||| | |||||| ||||| ||||| |||| | | ||| || Sbjct 21057824 GCGGAGTCAAGAACATCAGGTCTGTTGGTTGCAGCCAACACAATGACAC---CGGAATTA 21057768 Query 288936 CTT--AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 | |||||||||||| || |||| ||||||| || ||||| || ||||||||| Sbjct 21057767 CCAGAAAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTT 21057708 Query 288994 GAACCTCTTGAATCACCCGAATCGCTCCtttttt--tACCAACAGCATCAATTTCGTCAA 289051 ||||| || || | |||||| ||| |||||||||||||||| || |||| Sbjct 21057707 CCACCTCC-----CATCCCA---GCTCCTCTTTGCCTACCAACAGCATCAATCTCATCAA 21057656 Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111 | || | | || |||| || | |||| | |||| || || || || | || | Sbjct 21057655 TAAACACAATGCAGGGAGCTTTCGATTTCGCCTTCTCAAACAAATCCCTAACTCTAGACG 21057596 Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGC-GGATACTTGAATGAATGTTACA 289170 | || | ||||||| | | || ||||| || ||||| | | || || ||| | || Sbjct 21057595 CACCCACACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACAC-GAAAAGAAGGGCACT 21057537 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 |||||| || ||||| || || |||| ||| ||||| || || || ||||| || | Sbjct 21057536 CCTGCTTCTCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGGTGGACCAACC 21057477 Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT-TATATTTCTCAGGGCTCTTTAA 289289 || | ||| |||||| | | | || | | || || | || || ||||| |||| || Sbjct 21057476 AACA-AACACCCTTTAGGAATCTTAGCACCTAAGGCTGTGTACTTATCAGGATTCTTCAA 21057418 Query 289290 AAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAA 289349 || || |||| ||| | | ||| || || | |||| ||| || ||||| |||| Sbjct 21057417 GAAATCAACAACTTCTTGTAACTCAAGCTTAGCTTGATCAGCTCCAGCAACATCTCCAAA 21057358 Query 289350 AGT 289352 || Sbjct 21057357 TGT 21057355 Score = 105 bits (116), Expect = 2e-17 Identities = 276/413 (67%), Gaps = 20/413 (5%) Strand=Plus/Plus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| |||||||| |||||||| || || | || ||||| | ||| || ||| | Sbjct 6911070 TAAACCCATCCATTTCGGTTAAAATCTGGTTTAACGTCTGTTCACGTTCGTCGTTTCCTC 6911129 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 ||| | | ||| || ||| | || | || ||||||||||| || |||||||| | Sbjct 6911130 CTCCTATA----CCGGTTC-CTC-TCATTCTCCCGACAGCATCAATCTCATCAATGAACA 6911183 Query 289058 TCACACACGGAGAAT-----TTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGC 289112 | ||| || |||| |||| || | ||| || || ||||| || | || || Sbjct 6911184 CTAAACAAGGTGAATTGGCCTTTGCCTTG---TTG--AACAAGTCTCTAACCCTAGAAGC 6911238 Query 289113 TCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATT 289172 ||| | ||||||| |||| |||| || || || | || | | || || | ||| Sbjct 6911239 TCCTACACCAACAAACATCTCTATGAACTCCGAGCCTGACAATGAAAAAAACGGAACACC 6911298 Query 289173 TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA 289232 ||||| || |||| ||| | |||| || ||||| || ||||| || ||||| || Sbjct 6911299 GGCTTCTCCGGCTATAGCCTTGGCCAACAGAGTCTTTCCGGTTCCTGGCGGTCCGGTCAA 6911358 Query 289233 TAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA-CTTA-TATTTCTCAGGGCTCTTTAAA 289290 | ||||| || || | ||| ||||| |||| || | ||||||| ||| | |||| Sbjct 6911359 CAAGACTCCTTTAGGGATTTTAGCCCC--CAGAGCTGAGAATTTCTCTGGGGTTCTTAAG 6911416 Query 289291 AATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 ||||| || || || | || || | || || || || ||| |||||||| Sbjct 6911417 AATTCAACGATCTCTTTAAAGTCTTGCTTGGCTTCGTCTACTCCAGCTACATC 6911469 >seq8 Length=27720346 Score = 114 bits (126), Expect = 4e-20 Identities = 273/408 (67%), Gaps = 10/408 (2%) Strand=Plus/Plus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| |||||||| |||||||| || || | || ||||| | ||| || ||| | Sbjct 2725468 TAAACCCATCCATTTCGGTTAAAATCTGGTTTAACGTCTGTTCACGTTCGTCGTTTCCTC 2725527 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 ||| | | ||| || ||| | || | || ||||||||||| || |||||||| | Sbjct 2725528 CTCCTATA----CCGGTTC-CTC-TCATTCTCCCGACAGCATCAATCTCATCAATGAACA 2725581 Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | ||| || ||||| | || | ||| || ||||| || | || ||||| | Sbjct 2725582 CTAGACAAGGTGAATTAGCCTTTGCCTTGTTAAACAAGTCTCTAACCCTAGAAGCTCCTA 2725641 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTT 289177 ||||||| |||| |||| || || || |||| | | | || | ||| |||| Sbjct 2725642 CACCAACAAACATCTCTATGAACTCCGAGCCGGACAGTGAGAAAAACGGAACACCGGCTT 2725701 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || |||| ||| | |||| || ||||| || ||||| |||||||| || || | Sbjct 2725702 CTCCGGCTATAGCCTTGGCCAACAGAGTCTTTCCGGTTCCCGGTGGTCCGGTCAACAGGA 2725761 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTAT--ATTTCTCAGGGCTCTTTAAAAATTC 289295 | || || || | ||| ||||| || || | ||||||| ||| | |||| ||||| Sbjct 2725762 CGCCTTTAGGGATTTTAGCCCC--CAAACCTGAGAATTTCTCTGGGGTTCTTAAGAATTC 2725819 Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 || || || |||| || | || || || || |||||||||||| Sbjct 2725820 AACGATCTCTTCAAAGTCTTGCTTGGCTTCGTCTACTCCTGCTACATC 2725867 >seq13 Length=24101694 Score = 109 bits (120), Expect = 2e-18 Identities = 277/413 (67%), Gaps = 20/413 (5%) Strand=Plus/Plus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| |||||||| |||||||| || || | || ||||| | ||| || ||| | Sbjct 6540265 TAAACCCATCCATTTCGGTTAAAATCTGGTTTAACGTCTGTTCACGTTCGTCGTTTCCTC 6540324 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 ||| | | ||| || ||| | || | || ||||||||||| || |||||||| | Sbjct 6540325 CTCCTATA----CCGGTTC-CTC-TCATTCTCCCGACAGCATCAATCTCATCAATGAACA 6540378 Query 289058 TCACACACGGAGAAT-----TTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGC 289112 | ||| || |||| |||| || | ||| || || ||||| || | || || Sbjct 6540379 CTAAACAAGGTGAATTGGCCTTTGCCTTG---TTG--AACAAGTCTCTAACCCTAGAAGC 6540433 Query 289113 TCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATT 289172 ||| | ||||||| |||| |||| || || || |||| | | | || | ||| Sbjct 6540434 TCCTACACCAACAAACATCTCTATGAACTCCGAGCCGGACAATGAGAAAAACGGAACACC 6540493 Query 289173 TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA 289232 ||||| || |||| |||| | |||| || ||||| || ||||| || |||| || Sbjct 6540494 GGCTTCTCCGGCTATTGCCTTGGCCAACAGAGTCTTTCCGGTTCCTGGCTGTCCGGTCAA 6540553 Query 289233 TAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA-CTTA-TATTTCTCAGGGCTCTTTAAA 289290 | || || || || | ||| ||||| |||| || | ||||||| ||| | |||| Sbjct 6540554 CAAGACGCCTTTCGGGATTTTAGCCCC--CAGAGCTGAGAATTTCTCTGGGGTTCTTAAG 6540611 Query 289291 AATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 ||||| || || || |||| || | ||||| || || ||| |||||||| Sbjct 6540612 AATTCAACGATCTCTTCAAAGTCTTGCTTTGCTTCGTCTACTCCAGCTACATC 6540664 >seq18 Length=20869551 Score = 104 bits (114), Expect = 7e-17 Identities = 278/418 (67%), Gaps = 14/418 (3%) Strand=Plus/Plus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 |||||||||||| || |||| ||||||| || ||||| || ||||||||| ||| Sbjct 6948822 AAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCCACC 6948881 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAA 289056 || || || | |||||| || |||||||||||||||| || ||||| || Sbjct 6948882 TCC-----CATCCCA---GCTCCTCGTTGCCTACCAACAGCATCAATCTCATCAATAAAC 6948933 Query 289057 ATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCA 289116 | | || |||| || | |||| | |||| || || || || | || || || Sbjct 6948934 ACAATGCAGGGAGCTTTCGATTTCGCCTTCTCAAACAAATCCCTAACTCTAGACGCACCC 6948993 Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGC-GGATACTTGAATGAATGTTACATTTGC 289175 | ||||||| | | || ||||| || ||||| | | || || ||| | || ||| Sbjct 6948994 ACACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACAC-GAAAAGAAGGGCACTCCTGC 6949052 Query 289176 TTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAG 289235 ||| || ||||| || || |||| ||| ||||| || || || ||||| || | || | Sbjct 6949053 TTCTCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGGTGGACCAACCAACA- 6949111 Query 289236 AACTCCCTTT-GGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATT 289294 ||| ||||| || | || || || || | || || ||||| |||| || || | Sbjct 6949112 AACAACCTTTAGGGATCTTAGCACCTAAAGCTGTGTACTTATCAGGATTCTTCAAGAAGT 6949171 Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | || | ||| | | ||| || || | |||| ||| || ||||| |||| || Sbjct 6949172 CAACCACTTCTTGCAACTCAAGCTTAGCTTGATCAGCTCCAGCAACATCTCCAAATGT 6949229 >seq11 Length=49703607 Score = 104 bits (114), Expect = 7e-17 Identities = 278/418 (67%), Gaps = 14/418 (3%) Strand=Plus/Minus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 |||||||||||| || |||| ||||||| || ||||| || ||||||||| ||| Sbjct 35467517 AAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCCACC 35467458 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAA 289056 || || || | |||||| || |||||||||||||||| || ||||| || Sbjct 35467457 TCC-----CATCCCA---GCTCCTCGTTGCCTACCAACAGCATCAATCTCATCAATAAAC 35467406 Query 289057 ATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCA 289116 | | || |||| || | |||| | |||| || || || || | || || || Sbjct 35467405 ACAATGCAGGGAGCTTTCGATTTCGCCTTCTCAAACAAATCCCTAACTCTAGACGCACCC 35467346 Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGC-GGATACTTGAATGAATGTTACATTTGC 289175 | ||||||| | | || ||||| || ||||| | | || || ||| | || ||| Sbjct 35467345 ACACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACAC-GAAAAGAAGGGCACTCCTGC 35467287 Query 289176 TTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAG 289235 ||| || ||||| || || |||| ||| ||||| || || || ||||| || | || | Sbjct 35467286 TTCTCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGGTGGACCAACCAACA- 35467228 Query 289236 AACTCCCTTT-GGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATT 289294 ||| ||||| || | || || || || | || || ||||| |||| || || | Sbjct 35467227 AACAACCTTTAGGGATCTTAGCACCTAAAGCTGTGTACTTATCAGGATTCTTCAAGAAGT 35467168 Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | || | ||| | | ||| || || | |||| ||| || ||||| |||| || Sbjct 35467167 CAACCACTTCTTGCAACTCAAGCTTAGCTTGATCAGCTCCAGCAACATCTCCAAATGT 35467110 >seq17 Length=35492130 Score = 102 bits (112), Expect = 2e-16 Identities = 280/426 (66%), Gaps = 16/426 (4%) Strand=Plus/Plus Query 288936 CTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGA 288995 || ||| |||||||| || | | |||||||| || ||||| ||||||||||| Sbjct 2556526 CTCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATT--- 2556582 Query 288996 ACCTCTTGAATCACCCGAATCGCT---CCtttttt--tACCAACAGCATCAATTTCGTCA 289050 ||||| |||| ||| || ||| ||| ||||||||||||| ||||| || Sbjct 2556583 ACCTC------CACC--AATTCCTGTACCTCTTTGCCTACCAACAGCATCTATTTCATCC 2556634 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGAT 289110 | |||| | ||||||| ||||| | | || || || | || | || | ||| Sbjct 2556635 ACAAAAACAATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCACGGACCCTTGAT 2556694 Query 289111 GCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACA 289170 || |||| ||||||| |||| || ||||| |||||| | || | || ||| | |||| Sbjct 2556695 GCACCAACACCAACAAACATCTCAACAAACTCAGAACCCGAGATGGAAAAGAAGGGTACA 2556754 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 ||||| || || | || | || | || || || ||||| ||||| || || Sbjct 2556755 CCAGCTTCACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCTGTACCAGGAGGACCAATA 2556814 Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAA 289290 | ||||| || || || | || ||| ||| | | ||||||| |||| | | Sbjct 2556815 AGAAGAACCCCTTTGGGGATCCGGGCACCAACAGCAGTGAACCTCTCAGGCTTCTTCAGA 2556874 Query 289291 AATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAA 289350 || || || | |||| | || | || || ||||| ||| || |||||| ||||| Sbjct 2556875 AACTCCACCACTTCCATGAAATCTTGCTTAGCTTCATCGACTCCAGCAACATCATCAAAA 2556934 Query 289351 GTAATA 289356 || ||| Sbjct 2556935 GTTATA 2556940 Score = 91.5 bits (100), Expect = 4e-13 Identities = 253/375 (67%), Gaps = 20/375 (5%) Strand=Plus/Plus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 ||| |||||||| ||| || | ||||||| || |||||||| ||||||||| || Sbjct 29616877 AAACCCATCCATCTCTGTCAACAACTGATTAATAGTCTGTTCCCTCTCATCATTTCCTCC 29616936 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAA 289056 || || || | |||||| | | | || ||||| ||||| || |||||||| Sbjct 29616937 TCC-----CATCCCA---GCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAAT 29616988 Query 289057 ATCACACACGGAGAATTTTGTCTC-GCAATTGCAAATAATTCTCTTACACGGGATGCTCC 289115 | | ||| || | ||| | || || | |||| || || || || | ||||| || Sbjct 29616989 ACAATACAAGGGGC-TTTAGACTTAGCCTTCTCAAACAAATCCCTAACTCTAGATGCACC 29617047 Query 289116 AAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTG 289174 || ||| ||| | | || ||||| || || || | || || | ||| | || | Sbjct 29617048 AACACCCACAAAAAGCTCCACAAACTCCGAGGCCGC-ACAAGAGAAGAACGGCACTCCAG 29617106 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234 |||| || || || ||||| |||| ||||||||||| || || || ||||| | || Sbjct 29617107 CTTCCCCAGCCACCGCCCTAGCCAAGAGTGTCTTACCCGTACCGGGAGGTCCAAC-AAGC 29617165 Query 289235 GAACTCCCTTT-GGTACTTTTGC-CCCAGCAGACT-TATATTTCTCAGGGCTCTTTAAAA 289291 ||| |||||| || | || || |||| || || | || || ||||| |||| || | Sbjct 29617166 AAACACCCTTTAGGAATCTTAGCACCCA--AGGCTGTGTACTTATCAGGATTCTTCAAGA 29617223 Query 289292 ATTCTACAATTTCCT 289306 | || |||| ||||| Sbjct 29617224 AATCCACAACTTCCT 29617238 >seq14 Length=31758599 Score = 102 bits (112), Expect = 2e-16 Identities = 308/473 (65%), Gaps = 16/473 (3%) Strand=Plus/Plus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCC 288948 || || |||||||| ||||| || | ||| | || | | | || ||| |||||| Sbjct 2668046 ATGTCTGCTCTGTTGGTTGCAGCAACTACGATAACACCAGTGTTACCCTCAAAACCATCC 2668105 Query 288949 ATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCA 289008 || || | | ||||| || || ||||| ||||||||||| ||||| || Sbjct 2668106 ATTTCAGTCAGGAGCTGATTTAGGGTCTGTTCTCTTTCATCATT---ACCTC------CA 2668156 Query 289009 CCCGAATCGCT---CCtttttt--tACCAACAGCATCAATTTCGTCAATGAAAATCACAC 289063 || ||| || ||| ||| ||||||||||||| ||||| || | |||| | | Sbjct 2668157 CC--AATTCCTGTACCTCTTTGCCTACCAACAGCATCTATTTCATCTACAAAAACAATGC 2668214 Query 289064 ACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAA 289123 |||||| ||||| | | || || || | || | || | ||||| |||| ||||| Sbjct 2668215 ACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCACGGACCCTTGATGCACCAACACCAA 2668274 Query 289124 CATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTG 289183 || |||| || ||||| |||||| | || | || ||| | |||| ||||| || | Sbjct 2668275 CAAACATCTCAACAAACTCAGAACCCGAGATGGAAAAGAAGGGTACACCAGCTTCACCAG 2668334 Query 289184 CTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCT 289243 | | || | || | || || || || || ||||| || || | |||||||| | Sbjct 2668335 CGATGGCTTTTGCTAACAGGGTTTTCCCAGTACCAGGAGGACCAATAAGGAGAACTCCTT 2668394 Query 289244 TTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTT 289303 | || | || ||| ||| | | ||||||| |||| | ||| || || | || Sbjct 2668395 TGGGGATCCGGGCACCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACTT 2668454 Query 289304 CCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGTAATA 289356 || | || | || || ||||| ||| || |||||| ||||||| ||| Sbjct 2668455 CCATGAAATCTTGCTTAGCTTCATCGACTCCAGCAACATCATCAAAAGTTATA 2668507 >seq3 Length=28500605 Score = 98.7 bits (108), Expect = 3e-15 Identities = 279/425 (66%), Gaps = 14/425 (3%) Strand=Plus/Plus Query 288936 CTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGA 288995 || ||| |||||||| || | | |||||||| || ||||| ||||||||||| Sbjct 2646616 CTCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATT--- 2646672 Query 288996 ACCTCTTGAATCACCCGAATC--GCTCCtttttt--tACCAACAGCATCAATTTCGTCAA 289051 ||||| |||| | || | |||| ||| ||||||||||||| ||||| || | Sbjct 2646673 ACCTC------CACCA-ATTCCTGTTCCTCTTTGCCTACCAACAGCATCTATTTCATCCA 2646725 Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111 |||| | ||||||| ||||| | | || || || | || | || | |||| Sbjct 2646726 CAAAAACAATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCGCGGACCCTTGATG 2646785 Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACAT 289171 | |||| ||| ||| |||| || ||||| |||||| | || | || ||| | |||| Sbjct 2646786 CACCAACACCGACAAACATCTCAACAAACTCAGAACCCGAGATGGAAAAGAAGGGTACAC 2646845 Query 289172 TTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTA 289231 ||||| || || | || | || | || || || || || ||||| || || | Sbjct 2646846 CAGCTTCACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCAGTACCAGGAGGGCCAATAA 2646905 Query 289232 ATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAA 289291 ||||| || || || | || ||| ||| || | ||||||| |||| | || Sbjct 2646906 GGAGAACACCTTTGGGGATCCGGGCACCAACAGCAGTAAACCTCTCAGGCTTCTTCAGAA 2646965 Query 289292 ATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAG 289351 | || || | |||| | || | || || ||||| ||| || |||||| |||||| Sbjct 2646966 ACTCCACCACTTCCATGAAATCTTGCTTAGCTTCATCGACTCCAGCAACATCATCAAAAG 2647025 Query 289352 TAATA 289356 | ||| Sbjct 2647026 TTATA 2647030 >seq1 Length=23241285 Score = 86.0 bits (94), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 408951 TAACTCAGTTGGTTAGAGTGTCGGTCTTATGAGCCGAAAGTCGTGGGTTCGAGTCCCAC- 409009 || ||||||||||||||| || |||||||||||||||| |||| ||||||||| ||| | Sbjct 2054511 TAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGCGGGTTCGAGCCCCGCC 2054570 Query 409010 -ATAGAACAtttttttAAAGTTCCCA 409034 || | ||||||||||| ||| || Sbjct 2054571 GGAAGCATATTTTTTTAAATTTCTCA 2054596 >seq7 Length=33617777 Score = 84.2 bits (92), Expect = 6e-11 Identities = 311/475 (65%), Gaps = 28/475 (6%) Strand=Plus/Plus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAG-ATTCGGTTTGCTT-AAATCCAT 288946 || || ||||| || ||||| || | ||| | || | | | ||| ||| ||| |||| Sbjct 5165831 ATGTCTGCTCTATTGGTTGCAGCAACTACGATAACACCAGT--GTTACCTTCAAAACCAT 5165888 Query 288947 CCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAAT 289006 |||| |||| | ||||| || || ||||| ||||||||||| ||||| Sbjct 5165889 CCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATT---ACCTC------ 5165939 Query 289007 CACCCGAATC--GCTCCttttt--ttACCAACAGCATCAATTTCGTCAATGAAAATCACA 289062 || || | || | |||| ||| |||| |||||||| ||||| |||| || | | Sbjct 5165940 CA-CCAATTCCAGTTCCTCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATG 5165998 Query 289063 CACGGAGAATT----TTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118 || |||| || ||| || | ||| ||| | || | || | || || |||| Sbjct 5165999 CAAGGAGCGTTCTCCTTGGCTTTC--TTGAAAAGA--TCACGGACTCTTGAGGCACCAAC 5166054 Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTT 289177 ||| ||| |||| || ||||| |||||| | || | | || | ||| | ||| |||| Sbjct 5166055 ACCGACAAACATCTCAACAAACTCAGAACCAGAGA-TGGAGAAGAAAGGCACACCAGCTT 5166113 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || || | || | |||| ||| || || || || ||||| || || | |||| Sbjct 5166114 CACCAGCAATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAA 5166173 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTA 289297 | || || || | || || ||| | | | | |||| || |||| ||||| || | Sbjct 5166174 CACCTTTCGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCA 5166233 Query 289298 CAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | | |||| | || | ||||| |||||| ||| || |||||| ||||||| Sbjct 5166234 CCACTTCCATGAAATCTTGCTTTGCTTCATCAACTCCAGCAACATCATCAAAAGT 5166288 >seq5 Length=34971402 Score = 84.2 bits (92), Expect = 6e-11 Identities = 308/471 (65%), Gaps = 20/471 (4%) Strand=Plus/Plus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAG-ATTCGGTTTGCTT-AAATCCAT 288946 || || ||||| || ||||| || | ||| | || | | | ||| ||| ||| |||| Sbjct 11285991 ATGTCTGCTCTATTGGTTGCAGCAACTACGATAACACCAGT--GTTACCTTCAAAACCAT 11286048 Query 288947 CCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAAT 289006 |||| |||| | ||||| || || ||||| ||||||||||| ||||| | Sbjct 11286049 CCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATT---ACCTCCACCAA 11286105 Query 289007 CACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACG 289066 || | || | ||||| |||| |||||||| ||||| |||| || | | || | Sbjct 11286106 TTCCGG--TC-CCCCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCAAG 11286162 Query 289067 GAGAATT----TTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCA 289122 ||| || ||| || | ||| ||| | || | || | || || |||| ||| Sbjct 11286163 GAGCGTTCTCCTTGGCTTTC--TTGAAAAGA--TCACGGACTCTTGAGGCACCAACACCG 11286218 Query 289123 ACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCC 289181 ||| |||| || ||||| |||||| | || | | || | ||| | ||| ||||| || Sbjct 11286219 ACAAACATCTCAACAAACTCAGAACCAGAGA-TGGAGAAGAAAGGCACACCAGCTTCACC 11286277 Query 289182 TGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCC 289241 || | || | |||| ||| || || || || ||||| || || | ||||| || Sbjct 11286278 AGCAATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACC 11286337 Query 289242 CTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAAT 289301 || || | || || ||| | | | | |||| || |||| ||||| || || | Sbjct 11286338 TTTCGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCACCAC 11286397 Query 289302 TTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 |||| | || | ||||| |||||| ||| || |||||| ||||||| Sbjct 11286398 TTCCATGAAATCTTGCTTTGCTTCATCAACTCCAGCAACATCATCAAAAGT 11286448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471115868644444