Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq36 581 4e-161 seq16 581 4e-161 seq18 475 4e-129 seq4 251 8e-62 seq7 109 6e-19 seq9 107 2e-18 >seq36 Length=171746 Score = 581 bits (644), Expect = 4e-161 Identities = 713/968 (74%), Gaps = 4/968 (0%) Strand=Plus/Minus Query 159987 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 160046 ||||| || || | || |||||||| || ||||||| || || | ||| | ||||| Sbjct 56597 AACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 56538 Query 160047 ATCTGTTTC-ATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 160105 ||||||| || |||| ||| | |||||||| || || || || || || || ||||| Sbjct 56537 -TCTGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 56479 Query 160106 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 160165 ||| || |||| || || | || || ||||| || || || ||||| || |||| | Sbjct 56478 ACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTAC 56419 Query 160166 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 160225 ||| || |||||| | || || || || ||||||||||| ||||| ||||||| || Sbjct 56418 TTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATG 56359 Query 160226 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGC 160285 ||| || ||||||||||||| |||| | || | ||||| | | || | | Sbjct 56358 GCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 56299 Query 160286 ATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 160345 |||||||| ||||||||||||||| | |||| | |||||||| || ||||| ||| Sbjct 56298 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGT 56239 Query 160346 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCA 160405 |||||||| ||||| || || || || ||||||| ||| | | ||||| | ||||| Sbjct 56238 TGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCA 56179 Query 160406 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 160465 || ||| || |||| ||||||||| || |||||||||||||| |||| ||| |||| Sbjct 56178 GGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 56119 Query 160466 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 160525 |||||| || || ||||| || |||||||| || || |||||| | || || ||||| || Sbjct 56118 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 56059 Query 160526 ATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 160584 |||||| || || | || ||||||||| || | || ||||| | | | || Sbjct 56058 ATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 56000 Query 160585 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGA 160644 | ||||| || |||| || || || | ||||| | ||||| ||||| ||||| | Sbjct 55999 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAA 55940 Query 160645 CCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCAT 160704 | |||||||| || || || || ||||| || || || ||||||||||||||||| | Sbjct 55939 CTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 55880 Query 160705 TCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGT 160764 ||||||| || ||||| | || |||||| | || || ||||| ||||| || || |||| Sbjct 55879 TCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGT 55820 Query 160765 TCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGT 160824 | |||||| | ||| |||| || ||||| |||||||| || |||||||| |||||||| | Sbjct 55819 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAAT 55760 Query 160825 CCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTG 160884 | | | ||| ||||||| ||||| | || || ||||| || | | || |||||| Sbjct 55759 CAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTA 55700 Query 160885 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTG 160944 ||||||||||||||||||||||| ||||| || ||||||||||| || ||||| |||| Sbjct 55699 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 55640 Query 160945 CTGCTGAG 160952 ||| |||| Sbjct 55639 CTGTTGAG 55632 Score = 506 bits (560), Expect = 2e-138 Identities = 725/1019 (71%), Gaps = 2/1019 (0%) Strand=Plus/Minus Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747 ||||| || | || |||||| | |||| || ||||||||||| || |||||||| Sbjct 115915 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 115856 Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807 || | ||| | || ||| ||| | ||| | || |||||| | || || ||||| || Sbjct 115855 CTATTGCTTTTCCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 115796 Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTT 161867 | ||| |||||||| ||||| | || ||||||||| | || ||| || ||| | Sbjct 115795 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 115736 Query 161868 ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 161926 || || ||||| ||||| ||| | | | | |||||| || || || || ||||| Sbjct 115735 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 115677 Query 161927 TCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTGT 161986 |||||| || ||||| ||||| || ||| ||| | || || || ||| |||||| Sbjct 115676 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGGCTTTTGT 115617 Query 161987 GGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACG 162046 || ||||| || || ||||| |||| || || ||| | ||||| |||||||| || || Sbjct 115616 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 115557 Query 162047 TCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 162106 | || | || || || ||||| || || ||||||||||| |||||||||||||| Sbjct 115556 ATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 115497 Query 162107 CAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 162166 |||||||| || || ||| | ||||| || ||||||| || || || ||||| Sbjct 115496 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 115437 Query 162167 GGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAA 162226 || || || || ||| ||||| | | ||| | ||||| || ||||| ||||| |||| Sbjct 115436 TGTAGCCGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 115377 Query 162227 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCA 162286 ||| || |||||||||||||| || ||| |||| || | || || |||| |||||||| Sbjct 115376 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 115317 Query 162287 CGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 162346 || | || || |||||||| |||| || ||||| || ||||| || || || Sbjct 115316 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 115257 Query 162347 GTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 162406 ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||||| Sbjct 115256 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 115197 Query 162407 GCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 162466 || ||||| || |||| ||||| || || || ||| | ||||| || ||||| ||||| Sbjct 115196 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 115137 Query 162467 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCG 162526 || || | ||| |||||| || |||| | | ||||| ||| | ||||| || Sbjct 115136 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 115077 Query 162527 TGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTT 162586 ||| || || ||||| || || ||| | ||||| |||||||| || ||||| || || Sbjct 115076 TGCCTATGACTTCGTTTCCCAAGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTT 115017 Query 162587 CTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCA 162646 ||| ||||| || ||||| | || ||||| | ||||| ||| | || || || || Sbjct 115016 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 114957 Query 162647 ACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 114956 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 114898 Score = 495 bits (548), Expect = 4e-135 Identities = 708/992 (71%), Gaps = 4/992 (0%) Strand=Plus/Plus Query 161716 GGGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTTCCC-ACTGCTTATCTT 161774 |||| || ||||||||||| || |||||||| | | | ||||||| ||| ||| | Sbjct 48870 GGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTC-TATAGCTCTTCCCTTGTGCCTATTTC 48928 Query 161775 GCTATTGGCGGTTGGCTTACTGGCACAACTTTCGCAACGAGCTGGTATACCCATGGTCTC 161834 || | || |||||| | || || ||||| || | ||| |||||||| ||||| | Sbjct 48929 TCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGGTTG 48988 Query 161835 GCTAGTTCCTATCTTGAGGGTGCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGAC 161894 || ||||||||| | || ||| || ||| | || || ||||| ||||| ||| | Sbjct 48989 GCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAAT 49048 Query 161895 GCTATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCCG 161953 | | | |||||| || || || || ||||||||||| || ||||| ||||| || Sbjct 49049 AGTTTAGCGCATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCG 49107 Query 161954 CTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAAT 162013 ||| ||| | || || || ||| |||||| || ||||| || || ||||| |||| Sbjct 49108 TTGGTGTCAATTAGGTGGTCTGTGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAAT 49167 Query 162014 TGGATTCATGCTCCGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCCTACAATGC 162073 || || ||| | ||||| |||||||| || || | || | || || || ||||| Sbjct 49168 AGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGC 49227 Query 162074 TATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGG 162133 || || ||||||||||| |||||||||||||| |||||||| || || ||| | || Sbjct 49228 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 49287 Query 162134 TCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTT 162193 ||| || ||||||| || || || ||||| || || || || ||| ||||| | | Sbjct 49288 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCCGCTATATTTCGATTCATCCT 49347 Query 162194 GTTTCTTCAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGG 162253 ||| | ||||| || ||||| ||||| ||||||| || |||||||||||||| || || Sbjct 49348 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 49407 Query 162254 TATACTAGGTGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTATA 162313 | |||| || | || || |||| |||||||| || | || || |||||||| |||| Sbjct 49408 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 49467 Query 162314 CGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAGGAAGAGAC 162373 || ||||| || ||||| || || || ||| | | || || | ||||| || Sbjct 49468 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 49527 Query 162374 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAA 162433 |||||| |||||||| || |||||||| ||||| || ||||| || |||| ||||| || Sbjct 49528 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 49587 Query 162434 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTC 162493 || || ||| | ||||| || ||||| ||||| || || | ||| |||||| | Sbjct 49588 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 49647 Query 162494 TATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGAT 162553 | |||| | | ||||| ||| | ||||| ||||| || || ||||| || || || Sbjct 49648 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAAT 49707 Query 162554 CAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGA 162613 | | ||||| |||||||| || ||||| || ||||| ||||| || ||||| | || || Sbjct 49708 CCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 49767 Query 162614 AGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGA 162673 ||| | ||||| ||| | || || || || || ||||| ||| |||| ||||| || Sbjct 49768 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 49827 Query 162674 AGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 || ||||| || | || ||||| ||||||| Sbjct 49828 GGAGGTTCTACCACGTGGAAACGCTCTTTAAT 49859 Score = 279 bits (308), Expect = 6e-70 Identities = 447/639 (70%), Gaps = 5/639 (1%) Strand=Plus/Plus Query 162069 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCA 162128 ||||| || || |||||| |||| |||||||||||||| ||||||| | | ||| Sbjct 50662 AATGCAATCGCATTCTCTAGTCCCATTGCTGTTTTTGTTTCTATCTTCCTACTTAATCCA 50721 Query 162129 TTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTC 162188 | ||| || | ||||| || || || ||||| || | | || ||| ||||| Sbjct 50722 CTAAGTCGATCTGGCTGGTTCTTTGCGCCTAGTTTTGGTGTAGTCTCTATATTTCGATTC 50781 Query 162189 --CTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAG 162246 || || |||| ||||| || ||||| |||| ||||||| || ||||||||||||| Sbjct 50782 ACCTATT-TTTC--CAAGGGTTTCATAATTGGAAATTGAACCCATTTCATATGATGGGAG 50838 Query 162247 TTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATA 162306 | || ||| |||| || | || || |||| ||||||| || | || || ||||||| Sbjct 50839 TCGCCGGTGTACTGGGCGCGGCTCTGCTATGCACTATTCATGGTGCTACTGTAGAAAATA 50898 Query 162307 CATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAGG 162366 | |||| || ||||| || ||||| || || || ||| | | || || | | Sbjct 50899 CTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCG 50958 Query 162367 AAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGT 162426 |||| |||||||| |||||||| || |||||||| ||||| || ||||| || |||| | Sbjct 50959 AAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTT 51018 Query 162427 TTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA 162486 |||| || || || ||| | ||||| || ||||| ||||| || || | ||| |||||| Sbjct 51019 TTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGA 51078 Query 162487 CATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTC 162546 || |||| | | || || ||| | ||||| ||||| || || || || | Sbjct 51079 TGAGTGCTCTTGGAGTAGTCGGCCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCC 51138 Query 162547 AGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGC 162606 |||| ||| | | || |||||||| || ||| | || ||||| ||||| || ||||| Sbjct 51139 AGGAAATCTGTGTAGTGGAAGATCCGGAATTTAAGACTTTCTATACTAAAAATATTCTTT 51198 Query 162607 TCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCT 162666 | || ||||| | ||||| ||| | | || || || || ||||| ||| |||| | Sbjct 51199 TAAACGAAGGTATTCGTGCTTGGCTGGTGGCTCAAGATCAGCCTCATGAAAACCTTATAT 51258 Query 162667 TCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 |||| || || ||| | || | || ||||| | ||||| Sbjct 51259 TCCCTGAGGAGGTTGTACCACGTGGAAACGCTCATTAAT 51297 >seq16 Length=29110212 Score = 581 bits (644), Expect = 4e-161 Identities = 713/968 (74%), Gaps = 4/968 (0%) Strand=Plus/Plus Query 159987 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 160046 ||||| || || | || |||||||| || ||||||| || || | ||| | ||||| Sbjct 16535157 AACCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 16535216 Query 160047 ATCTGTTTC-ATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 160105 ||||||| || |||| ||| | |||||||| || || || || || || || ||||| Sbjct 16535217 -TCTGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 16535275 Query 160106 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 160165 ||| || |||| || || | || || ||||| || || || ||||| || |||| | Sbjct 16535276 ACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTAC 16535335 Query 160166 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 160225 ||| || |||||| | || || || || ||||||||||| ||||| ||||||| || Sbjct 16535336 TTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATG 16535395 Query 160226 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGC 160285 ||| || ||||||||||||| |||| | || | ||||| | | || | | Sbjct 16535396 GCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 16535455 Query 160286 ATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 160345 |||||||| ||||||||||||||| | |||| | |||||||| || ||||| ||| Sbjct 16535456 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGT 16535515 Query 160346 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCA 160405 |||||||| ||||| || || || || ||||||| ||| | | ||||| | ||||| Sbjct 16535516 TGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCA 16535575 Query 160406 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 160465 || ||| || |||| ||||||||| || |||||||||||||| |||| ||| |||| Sbjct 16535576 GGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 16535635 Query 160466 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 160525 |||||| || || ||||| || |||||||| || || |||||| | || || ||||| || Sbjct 16535636 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 16535695 Query 160526 ATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 160584 |||||| || || | || ||||||||| || | || ||||| | | | || Sbjct 16535696 ATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 16535754 Query 160585 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGA 160644 | ||||| || |||| || || || | ||||| | ||||| ||||| ||||| | Sbjct 16535755 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAA 16535814 Query 160645 CCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCAT 160704 | |||||||| || || || || ||||| || || || ||||||||||||||||| | Sbjct 16535815 CTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 16535874 Query 160705 TCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGT 160764 ||||||| || ||||| | || |||||| | || || ||||| ||||| || || |||| Sbjct 16535875 TCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGT 16535934 Query 160765 TCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGT 160824 | |||||| | ||| |||| || ||||| |||||||| || |||||||| |||||||| | Sbjct 16535935 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAAT 16535994 Query 160825 CCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTG 160884 | | | ||| ||||||| ||||| | || || ||||| || | | || |||||| Sbjct 16535995 CAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTA 16536054 Query 160885 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTG 160944 ||||||||||||||||||||||| ||||| || ||||||||||| || ||||| |||| Sbjct 16536055 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 16536114 Query 160945 CTGCTGAG 160952 ||| |||| Sbjct 16536115 CTGTTGAG 16536122 Score = 109 bits (120), Expect = 6e-19 Identities = 157/220 (71%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 161089 TGAAGGTAACCAAGTTGTTCAATGTGAACCAGACCAGTACATTTTAGATGCAGCAGAAGA 161148 ||||||| | ||||||||| | ||||| ||| ||| || | ||||| || || || Sbjct 27107500 TGAAGGTGAGCAAGTTGTTGAGTGTGACGACGACGTCTACGTTCTTGATGCCGCTGAGGA 27107559 Query 161149 GGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCTTGCTCTTCCTGTGCAGGTAA 161208 || ||| | || | || ||||| ||||||||| |||| || |||||| ||||| Sbjct 27107560 AGCTGGAATCGACTTGCCTTACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAA 27107619 Query 161209 AATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTCTTGGATGATGACCAGAT--- 161265 | ||| || || | || ||||||||||||||| ||| | |||||||||||||| Sbjct 27107620 AGTTACGTCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGGC 27107679 Query 161266 TGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 |||| || || || | || ||||| || || |||||| Sbjct 27107680 TGAA---GGGTTTGTTCTCACTTGTGTGGCGTACCCTACT 27107716 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 160888 TTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTGCTG 160947 |||||||||||||||||||||| ||||| || ||||||||||| || ||||| ||||||| Sbjct 26298428 TTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTG 26298487 Query 160948 CTG 160950 || Sbjct 26298488 TTG 26298490 >seq18 Length=20869551 Score = 475 bits (526), Expect = 4e-129 Identities = 558/752 (74%), Gaps = 2/752 (0%) Strand=Plus/Minus Query 160202 GGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATT 160261 |||||| ||||| ||||||| ||||| | ||||||||||||| |||| | || | Sbjct 2057535 GGAAGCTGCATCCGTTGATGAATGGCTACACAACGGTGGTCCTTATGAACTAATTGTTCT 2057476 Query 160262 TCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTTT 160321 ||||| | | || | | |||||||| ||||||||||||||| | |||| | Sbjct 2057475 ACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 2057416 Query 160322 AGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGT 160381 |||||||| || ||||| ||| |||||||| ||||| || || | || ||||||| Sbjct 2057415 GGGTATGCGTCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGTTGCGACTGCTGT 2057356 Query 160382 ATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTC 160441 ||| | | ||||| | ||||| || ||| || |||| ||||||||| || ||||| Sbjct 2057355 TTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 2057296 Query 160442 TGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTT 160501 ||||||||| |||| ||| |||||||||| || || ||||| || |||||||| || || Sbjct 2057295 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 2057236 Query 160502 CCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAG 160561 |||||| | || || ||||| |||||||| || || | || ||||||||| || Sbjct 2057235 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 2057176 Query 160562 TCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTT 160620 | || ||||| | | | || | ||||| || |||| || || || | |||| Sbjct 2057175 CTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 2057117 Query 160621 ATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTC 160680 | | ||||| ||||| ||||| || |||||||| || || || || ||||| || || | Sbjct 2057116 ACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCC 2057057 Query 160681 GTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAG 160740 | ||||||||||||||||| |||||||| || ||||| | || |||||| | || | Sbjct 2057056 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGG 2056997 Query 160741 CATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACC 160800 | ||||| ||||| || || ||||| |||||| | ||| |||| || ||||| ||||||| Sbjct 2056996 CTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACC 2056937 Query 160801 TCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCT 160860 | || |||||||| |||||||| || | | ||| ||||||| ||||| | || || | Sbjct 2056936 TAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTT 2056877 Query 160861 GGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCAC 160920 |||| || | | || |||||| ||||||||||||||||||||||| ||||| || | Sbjct 2056876 GGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 2056817 Query 160921 ACAACTTCCCACTCGACCTCGCTGCTGCTGAG 160952 |||||||||| || ||||| ||||||| |||| Sbjct 2056816 ACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 2056785 Score = 273 bits (302), Expect = 2e-68 Identities = 262/336 (78%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTC 160676 ||||| | ||||| ||||| ||||| || |||||||| || || || || ||||| || Sbjct 2056475 GGTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTT 2056416 Query 160677 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTG 160736 || || ||||||||||||||||| |||||||| || ||||| | || |||||| | Sbjct 2056415 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 2056356 Query 160737 GCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTC 160796 || || ||||| ||||| || || ||||| |||||| | ||| |||| || ||||| ||| Sbjct 2056355 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTC 2056296 Query 160797 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAAC 160856 ||||| || |||||||| |||||||| || | | ||| ||||||| ||||| | || Sbjct 2056295 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAAT 2056236 Query 160857 ACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 160916 || ||||| || | | || |||||| ||||||||||||||||||||||| ||||| Sbjct 2056235 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 2056176 Query 160917 GCACACAACTTCCCACTCGACCTCGCTGCTGCTGAG 160952 || ||||||||||| || ||||| ||||||| |||| Sbjct 2056175 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 2056140 >seq4 Length=30110606 Score = 251 bits (278), Expect = 8e-62 Identities = 303/412 (74%), Gaps = 0/412 (0%) Strand=Plus/Minus Query 162063 CCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATC 162122 || || ||||| || || || |||||||| |||||||||||||| |||||||| || Sbjct 15118881 CCTTATAATGCAATCGCATTATCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATT 15118822 Query 162123 TACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTT 162182 || ||| | ||||| || ||||||| || || || ||||| || ||||| || ||| Sbjct 15118821 TATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTT 15118762 Query 162183 AGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATG 162242 ||||| | | ||| | ||||| || ||||| ||||| ||||||| || ||||||||| Sbjct 15118761 CGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATG 15118702 Query 162243 GGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAA 162302 ||||| || ||| |||| || | || || |||| |||||||| || | || || ||| Sbjct 15118701 GGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAA 15118642 Query 162303 AATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAG 162362 ||||| |||| || ||||| | ||||| || || || ||| | | || || Sbjct 15118641 AATACTTTATTTGAAGATGGTAATGGTGCAAATACATTCTGTGCTTTTAACCCAACTCAA 15118582 Query 162363 GAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATT 162422 | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| || || Sbjct 15118581 GCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTT 15118522 Query 162423 GCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTA 162474 || ||||| || || | ||| | ||||| || ||||| ||||| || |||| Sbjct 15118521 GCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGTACCAGTTA 15118470 >seq7 Length=33617777 Score = 109 bits (120), Expect = 6e-19 Identities = 157/220 (71%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 161089 TGAAGGTAACCAAGTTGTTCAATGTGAACCAGACCAGTACATTTTAGATGCAGCAGAAGA 161148 ||||||| | ||||||||| | ||||| ||| ||| || | ||||| || || || Sbjct 31470551 TGAAGGTGAGCAAGTTGTTGAGTGTGACGACGACGTCTACGTTCTTGATGCCGCTGAGGA 31470610 Query 161149 GGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCTTGCTCTTCCTGTGCAGGTAA 161208 || ||| | || | || ||||| ||||||||| |||| || |||||| ||||| Sbjct 31470611 AGCTGGAATCGACTTGCCTTACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAA 31470670 Query 161209 AATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTCTTGGATGATGACCAGAT--- 161265 | ||| || || | || ||||||||||||||| ||| | |||||||||||||| Sbjct 31470671 AGTTACGTCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGGC 31470730 Query 161266 TGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 |||| || || || | || ||||| || || |||||| Sbjct 31470731 TGAA---GGGTTTGTTCTCACTTGTGTGGCGTACCCTACT 31470767 >seq9 Length=38094978 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 161089 TGAAGGTAACCAAGTTGTTCAATGTGAACCAGACCAGTACATTTTAGATGCAGCAGAAGA 161148 ||||||| | ||||||||| | ||||| ||| ||| || | ||||| || || || Sbjct 36084645 TGAAGGTGAGCAAGTTGTTGAGTGTGACGACGACATCTACGTTCTTGATGCCGCTGAGGA 36084704 Query 161149 GGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCTTGCTCTTCCTGTGCAGGTAA 161208 || ||| | || | || ||||| ||||||||| |||| || ||| || ||||| Sbjct 36084705 AGCTGGAATCGACTTGCCTTACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGCGCTGGTAA 36084764 Query 161209 AATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTCTTGGATGATGACCAGATTGA 161268 | || | || || | || ||||||||||||||| ||| | ||||||||||||| ||| Sbjct 36084765 AGTTGTGTCTGGATCTGTTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGA-TGA 36084823 Query 161269 AT-CTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 || || || || | || ||||| || || |||||| Sbjct 36084824 ATGAAGGGTTTGTTCTCACTTGTGTGGCTTACCCTACT 36084861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559243746714400