Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq16 143 3e-29 seq7 134 2e-26 seq3 132 6e-26 seq5 131 2e-25 seq18 123 3e-23 seq17 123 3e-23 seq14 123 3e-23 seq11 123 3e-23 seq20 118 1e-21 seq6 109 7e-19 seq9 104 3e-17 seq4 104 3e-17 seq11323 96.9 4e-15 >seq16 Length=29110212 Score = 143 bits (158), Expect = 3e-29 Identities = 281/414 (68%), Gaps = 6/414 (1%) Strand=Plus/Plus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 |||||| || || | | ||| || || |||| ||| | || ||||| | | ||||| Sbjct 4733070 ATCAAGAATGTCAGCTCTATTGGTTGCAGCAACAACGATAACACCAGTGTTACCTTCAAA 4733129 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||||| || || | ||||| | || |||||||| |||||||| || Sbjct 4733130 ACCATCCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATTACCTCC--- 4733186 Query 11602 ACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACA 11658 |||| |||| | | |||| | || || ||||| || ||||||| |||||||| || Sbjct 4733187 ACCAATTCCAGTTCCTCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCA 4733246 Query 11659 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAAC 11718 || || || ||| | | || ||||| || || ||| |||||| ||||| || Sbjct 4733247 AGGAGCGTTCTCCTTGGCTTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGAC 4733306 Query 11719 AAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGC 11778 ||||||||| ||||| | | ||||| || ||| || ||| | |||||| || Sbjct 4733307 AAACATCTCAACAAACTCAGAACCAGAGATGGAGAAGAAAGGCACACCAGCTTCACCAGC 4733366 Query 11779 GATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCG 11838 |||||| || | ||||| || || ||||| || ||| || || | ||| Sbjct 4733367 AATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTT 4733426 Query 11839 GGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCAC 11892 ||||||||||||||| || | |||||||||| ||| ||||| ||||| Sbjct 4733427 CGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAGAAACTCCAC 4733480 >seq7 Length=33617777 Score = 134 bits (148), Expect = 2e-26 Identities = 279/414 (67%), Gaps = 6/414 (1%) Strand=Plus/Plus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 |||||| || || | | ||| || || |||| || | || ||||| | | ||||| Sbjct 5165824 ATCAAGAATGTCTGCTCTATTGGTTGCAGCAACTACGATAACACCAGTGTTACCTTCAAA 5165883 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||||| || || | ||||| | || |||||||| |||||||| || Sbjct 5165884 ACCATCCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATTACCTCC--- 5165940 Query 11602 ACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACA 11658 |||| |||| | | |||| | || || ||||| || ||||||| |||||||| || Sbjct 5165941 ACCAATTCCAGTTCCTCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCA 5166000 Query 11659 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAAC 11718 || || || ||| | | || ||||| || || ||| |||||| ||||| || Sbjct 5166001 AGGAGCGTTCTCCTTGGCTTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGAC 5166060 Query 11719 AAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGC 11778 ||||||||| ||||| | | ||||| || ||| || ||| | |||||| || Sbjct 5166061 AAACATCTCAACAAACTCAGAACCAGAGATGGAGAAGAAAGGCACACCAGCTTCACCAGC 5166120 Query 11779 GATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCG 11838 |||||| || | ||||| || || ||||| || ||| || || | ||| Sbjct 5166121 AATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTT 5166180 Query 11839 GGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCAC 11892 ||||||||||||||| || | |||||||||| ||| | ||| ||||| Sbjct 5166181 CGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCAC 5166234 Score = 102 bits (112), Expect = 1e-16 Identities = 188/276 (68%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 11617 TTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 11676 |||| | || || ||||| || ||||||| |||||||| || || || || ||| Sbjct 5166351 TTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGC 5166410 Query 11677 GATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTT 11736 | | || ||||| || || ||| |||||| ||||| ||||||||||| ||||| | Sbjct 5166411 TTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACTC 5166470 Query 11737 TGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAG 11796 | ||||| || ||| || ||| | |||||| || |||||| || | || Sbjct 5166471 AGAACCAGAGATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAAAG 5166530 Query 11797 GGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACT 11856 ||| || || ||||| || ||| || || | ||| ||||||||||||||| Sbjct 5166531 GGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCAAC 5166590 Query 11857 TCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCAC 11892 || |||||||||||| ||| | ||| ||||| Sbjct 5166591 CGCAGTGAATCTCTCGGGTTTCTTCAAAAACTCCAC 5166626 >seq3 Length=28500605 Score = 132 bits (146), Expect = 6e-26 Identities = 200/280 (71%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 ||||||||||||||| || | || |||||||| || |||||||||||||||||| || Sbjct 24326982 AAAGCCATCCATCTCTGTCAACAACTGATTAATGGTCTGTTCTCTCTCATCATTTCCT-- 24327039 Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 | | ||| ||||| | | ||| | ||||| || ||||||||||||||||| |||||| Sbjct 24327040 CCTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAATACAATA 24327099 Query 11657 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACC 11715 || || | ||| | || | || || | ||| | ||| || ||||||||||| Sbjct 24327100 CAAGG-GGCTTTAGACTTAGCCTTCTCGAACAAATCCCTAACTCTAGATGCACCCACACC 24327158 Query 11716 AACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACC 11775 || || | ||||||||| | | ||||| ||| || ||| || || | ||| || Sbjct 24327159 CACGAAAAGCTCCACAAACTCCGAGGCAGCGCAGGAGAAGAACGGTACTCCAGCTTCCCC 24327218 Query 11776 CGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGC 11815 || | || | || | ||| ||||| |||||||| ||| Sbjct 24327219 AGCCACCGCCCTAGCCAAGAGAGTCTTACCCGTACCAGGC 24327258 Score = 114 bits (126), Expect = 2e-20 Identities = 244/361 (68%), Gaps = 10/361 (3%) Strand=Plus/Plus Query 11537 TCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCT 11596 ||||| |||||||| || || || | ||||||| || |||||||| |||||||| || Sbjct 2646617 TCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATTACCT 2646676 Query 11597 GGCATACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACA 11653 |||| || | | | |||| | || || ||||| || ||||| | || ||| Sbjct 2646677 CC---ACCAATTCCTGTTCCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACA 2646733 Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713 || || || |||||| ||| ||| || |||||||| |||||| ||||| ||| Sbjct 2646734 ATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCGCGGACCCTTGATGCACCAACA 2646793 Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGG--ATGAATGGGACATTTGATT 11771 || ||||||||||| ||||| | | | ||| ||| | ||| || ||| | || Sbjct 2646794 CCGACAAACATCTCAACAAACTCAGAACCCGAG--ATGGAAAAGAAGGGTACACCAGCTT 2646851 Query 11772 CACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGG 11831 |||| || |||||| || | ||||| || || ||||| || || || || Sbjct 2646852 CACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCAGTACCAGGAGGGCCAATAAGGAGAA 2646911 Query 11832 CGCCTCGGGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCA 11891 | ||| ||||||| ||||||| || | | ||||| || | ||| ||||| |||| Sbjct 2646912 CACCTTTGGGGATCCGGGCACCAACAGCAGTAAACCTCTCAGGCTTCTTCAGAAACTCCA 2646971 Query 11892 C 11892 | Sbjct 2646972 C 2646972 >seq5 Length=34971402 Score = 131 bits (144), Expect = 2e-25 Identities = 278/414 (67%), Gaps = 6/414 (1%) Strand=Plus/Plus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 |||||| || || | | ||| || || |||| || | || ||||| | | ||||| Sbjct 11285984 ATCAAGAATGTCTGCTCTATTGGTTGCAGCAACTACGATAACACCAGTGTTACCTTCAAA 11286043 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||||| || || | ||||| | || |||||||| |||||||| || Sbjct 11286044 ACCATCCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATTACCTCC--- 11286100 Query 11602 ACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACA 11658 |||| || | | | |||| | || || ||||| || ||||||| |||||||| || Sbjct 11286101 ACCAATTCCGGTCCCCCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCA 11286160 Query 11659 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAAC 11718 || || || ||| | | || ||||| || || ||| |||||| ||||| || Sbjct 11286161 AGGAGCGTTCTCCTTGGCTTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGAC 11286220 Query 11719 AAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGC 11778 ||||||||| ||||| | | ||||| || ||| || ||| | |||||| || Sbjct 11286221 AAACATCTCAACAAACTCAGAACCAGAGATGGAGAAGAAAGGCACACCAGCTTCACCAGC 11286280 Query 11779 GATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCG 11838 |||||| || | ||||| || || ||||| || ||| || || | ||| Sbjct 11286281 AATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTT 11286340 Query 11839 GGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCAC 11892 ||||||||||||||| || | |||||||||| ||| | ||| ||||| Sbjct 11286341 CGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCAC 11286394 >seq18 Length=20869551 Score = 123 bits (136), Expect = 3e-23 Identities = 198/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 ||| ||||||||||| || | | |||||||| || |||||||||||||||||| | Sbjct 6948822 AAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCC--A 6948879 Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 | | ||| ||||| | |||||| | || || ||||||||||||||||| || ||||| Sbjct 6948880 CCTCCCATCCCAGCTCCTCGTTGCCTACCAACAGCATCAATCTCATCAATAAACACAATG 6948939 Query 11657 CATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCAC 11712 || || || |||| || | ||||| | ||| | ||| || |||||||| Sbjct 6948940 CAGGGAGCTTTCGATTTC----GCCTTCTCAAACAAATCCCTAACTCTAGACGCACCCAC 6948995 Query 11713 ACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTC 11772 ||||||||| | ||| ||||| | | |||| ||| | ||| || || || ||| Sbjct 6948996 ACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACACGAAAAGAAGGGCACTCCTGCTTC 6949055 Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || || | |||| || | || ||||| |||||||| || Sbjct 6949056 TCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGG 6949097 >seq17 Length=35492130 Score = 123 bits (136), Expect = 3e-23 Identities = 246/361 (68%), Gaps = 10/361 (3%) Strand=Plus/Plus Query 11537 TCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCT 11596 ||||| |||||||| || || || | ||||||| || |||||||| |||||||| || Sbjct 2556527 TCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATTACCT 2556586 Query 11597 GGCATACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACA 11653 |||| || | || | |||| | || || ||||| || ||||| | || ||| Sbjct 2556587 CC---ACCAATTCCTGTACCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACA 2556643 Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713 || || || |||||| ||| ||| || ||||| || |||||| ||||| ||| Sbjct 2556644 ATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCACGGACCCTTGATGCACCAACA 2556703 Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGG--ATGAATGGGACATTTGATT 11771 |||||||||||||| ||||| | | | ||| ||| | ||| || ||| | || Sbjct 2556704 CCAACAAACATCTCAACAAACTCAGAACCCGAG--ATGGAAAAGAAGGGTACACCAGCTT 2556761 Query 11772 CACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGG 11831 |||| || |||||| || | ||||| || || ||||| || ||| ||||| Sbjct 2556762 CACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCTGTACCAGGAGGACCAATAAGAAGAA 2556821 Query 11832 CGCCTCGGGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCA 11891 | ||| ||||||| ||||||| || | ||||| || | ||| ||||| |||| Sbjct 2556822 CCCCTTTGGGGATCCGGGCACCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCA 2556881 Query 11892 C 11892 | Sbjct 2556882 C 2556882 Score = 116 bits (128), Expect = 5e-21 Identities = 196/279 (70%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 ||| ||||||||||| || | || |||||||| || ||||| |||||||||||| || Sbjct 29616877 AAACCCATCCATCTCTGTCAACAACTGATTAATAGTCTGTTCCCTCTCATCATTTCCT-- 29616934 Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 | | ||| ||||| | | ||| | ||||| || ||||||||||||||||| |||||| Sbjct 29616935 CCTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAATACAATA 29616994 Query 11657 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACC 11715 || || | ||| | || | ||||| | ||| | ||| || ||||| ||||| Sbjct 29616995 CAAGG-GGCTTTAGACTTAGCCTTCTCAAACAAATCCCTAACTCTAGATGCACCAACACC 29617053 Query 11716 AACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACC 11775 ||||| | ||||||||| | | ||| | || || ||| || || | ||| || Sbjct 29617054 CACAAAAAGCTCCACAAACTCCGAGGCCGCACAAGAGAAGAACGGCACTCCAGCTTCCCC 29617113 Query 11776 CGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || | || | || | ||| ||||| |||||||| || Sbjct 29617114 AGCCACCGCCCTAGCCAAGAGTGTCTTACCCGTACCGGG 29617152 >seq14 Length=31758599 Score = 123 bits (136), Expect = 3e-23 Identities = 298/448 (67%), Gaps = 10/448 (2%) Strand=Plus/Plus Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509 || ||||| || || || | || | ||| ||||| || || | | || || || Sbjct 2668007 CGGTCAAACCGCCCTGGTCTTAGCAAAGCGGAGTCAAGAATGTCTGCTCTGTTGGTTGCA 2668066 Query 11510 GCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569 |||| || | || ||||| | | ||||| |||||||| || || || | ||||| Sbjct 2668067 GCAACTACGATAACACCAGTGTTACCCTCAAAACCATCCATTTCAGTCAGGAGCTGATTT 2668126 Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCA---CCAGCACTGCGTTGCTTGCCC 11626 | || |||||||| |||||||| || |||| || | || | |||| | || Sbjct 2668127 AGGGTCTGTTCTCTTTCATCATTACCTCC---ACCAATTCCTGTACCTCTTTGCCTACCA 2668183 Query 11627 ACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAG 11686 || ||||| || ||||| | || ||||| || || |||||| ||| ||| || Sbjct 2668184 ACAGCATCTATTTCATCTACAAAAACAATGCACGGAGCATTTTCTTTGGCTTTTTTGAAA 2668243 Query 11687 AGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG 11746 ||||| || |||||| ||||| ||||||||||||||||| ||||| | | | ||| Sbjct 2668244 AGATCACGGACCCTTGATGCACCAACACCAACAAACATCTCAACAAACTCAGAACCCGAG 2668303 Query 11747 CACTGG--ATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTC 11804 ||| | ||| || ||| | |||||| ||||||||| || | ||||| || | Sbjct 2668304 --ATGGAAAAGAAGGGTACACCAGCTTCACCAGCGATGGCTTTTGCTAACAGGGTTTTCC 2668361 Query 11805 CCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAAT 11864 | ||||| || ||| || || | ||| ||||||| ||||||| || Sbjct 2668362 CAGTACCAGGAGGACCAATAAGGAGAACTCCTTTGGGGATCCGGGCACCAACAGCAGTGA 2668421 Query 11865 ATCTCTCGGGTTGCTTGAGAAAATCCAC 11892 | ||||| || | ||| ||||| ||||| Sbjct 2668422 ACCTCTCAGGCTTCTTCAGAAACTCCAC 2668449 Score = 114 bits (126), Expect = 2e-20 Identities = 196/280 (70%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 ||| ||||||||||| || | || |||||||| || |||||||||||||||||| || Sbjct 26609501 AAACCCATCCATCTCTGTCAACAACTGATTAATGGTCTGTTCTCTCTCATCATTTCCT-- 26609558 Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 | ||| ||||| | | ||| | ||||| || || |||||||||||||| |||||| Sbjct 26609559 CCACCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCGATCTCATCAATGAATACAATA 26609618 Query 11657 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACC 11715 || || | ||| | || | || || | ||| | ||| || ||||||||||| Sbjct 26609619 CAAGG-GGCTTTAGACTTAGCCTTCTCGAACAAATCCCTAACTCTAGATGCACCCACACC 26609677 Query 11716 AACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACC 11775 || || | ||||||||| | | ||||| ||| || ||| || || | ||| || Sbjct 26609678 CACGAAAAGCTCCACAAACTCCGAGGCAGCGCAGGAGAAGAACGGCACTCCAGCTTCCCC 26609737 Query 11776 CGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGC 11815 || | || | || | ||| || || |||||||| ||| Sbjct 26609738 AGCCACCGCCCTAGCCAAGAGTGTTTTACCCGTACCGGGC 26609777 >seq11 Length=49703607 Score = 123 bits (136), Expect = 3e-23 Identities = 198/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Minus Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 ||| ||||||||||| || | | |||||||| || |||||||||||||||||| | Sbjct 35467517 AAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCC--A 35467460 Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 | | ||| ||||| | |||||| | || || ||||||||||||||||| || ||||| Sbjct 35467459 CCTCCCATCCCAGCTCCTCGTTGCCTACCAACAGCATCAATCTCATCAATAAACACAATG 35467400 Query 11657 CATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCAC 11712 || || || |||| || | ||||| | ||| | ||| || |||||||| Sbjct 35467399 CAGGGAGCTTTCGATTTC----GCCTTCTCAAACAAATCCCTAACTCTAGACGCACCCAC 35467344 Query 11713 ACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTC 11772 ||||||||| | ||| ||||| | | |||| ||| | ||| || || || ||| Sbjct 35467343 ACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACACGAAAAGAAGGGCACTCCTGCTTC 35467284 Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || || | |||| || | || ||||| |||||||| || Sbjct 35467283 TCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGG 35467242 >seq20 Length=30099736 Score = 118 bits (130), Expect = 1e-21 Identities = 197/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Minus Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 ||| ||||||||||| || | | |||||||| || |||||||||||||||||| | Sbjct 21057762 AAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCC--A 21057705 Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 | | ||| ||||| | | |||| | || || ||||||||||||||||| || ||||| Sbjct 21057704 CCTCCCATCCCAGCTCCTCTTTGCCTACCAACAGCATCAATCTCATCAATAAACACAATG 21057645 Query 11657 CATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCAC 11712 || || || |||| || | ||||| | ||| | ||| || |||||||| Sbjct 21057644 CAGGGAGCTTTCGATTTC----GCCTTCTCAAACAAATCCCTAACTCTAGACGCACCCAC 21057589 Query 11713 ACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTC 11772 ||||||||| | ||| ||||| | | |||| ||| | ||| || || || ||| Sbjct 21057588 ACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACACGAAAAGAAGGGCACTCCTGCTTC 21057529 Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || || | |||| || | || ||||| |||||||| || Sbjct 21057528 TCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGG 21057487 >seq6 Length=26391736 Score = 109 bits (120), Expect = 7e-19 Identities = 142/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||| || || || || || ||||| |||||||| || || |||||||| || Sbjct 4051023 GTGTAGACCTTCGTCACGCGAGATGAGTTCGTTTGAGAAAGTAAGGCCAGGCATGAGTCC 4051082 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | |||||| ||||||||||||||||| || || || Sbjct 4051083 TCGCTTCTTAAGCCAGAAGATTGAGCAGAAGCTTCCGGAGAAGAAGATACCTTCGACGCA 4051142 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || || | | ||||| ||||||| |||| | | || | ||||||||| || Sbjct 4051143 AGCGAAAGCGATGATTCGTTCAGCGAAGGTCTGAGA---TCCGTCGATCCATTTCATCGC 4051199 Query 122850 CCATTTCGCCTTCTTC 122865 ||| | || |||||| Sbjct 4051200 CCACTGAGCTTTCTTC 4051215 >seq9 Length=38094978 Score = 104 bits (114), Expect = 3e-17 Identities = 141/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||| || || || || || ||||| |||||||| || || ||||||||||| Sbjct 5073836 GTGTAGACCTTCGTCACGCGAGATCAGTTCGTTTGAGAAAGTAAGGCCAGGCATGAGACC 5073895 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 || ||||| | ||| | || | |||||| ||||||||||||||||| || || || Sbjct 5073896 TCGTTTCTTAAGCCAGAAGATTGAGCAGAAGCTTCCGGAGAAGAAGATACCTTCGACGCA 5073955 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || || | | ||||| ||||||| |||| | | || | |||| |||| || Sbjct 5073956 AGCGAAAGCGATGATTCGTTCAGCGAAGGTTTGAGA---TCCGTCGATCCATGTCATAGC 5074012 Query 122850 CCATTTCGCCTTCTTC 122865 ||| | || |||||| Sbjct 5074013 CCACTGGGCTTTCTTC 5074028 >seq4 Length=30110606 Score = 104 bits (114), Expect = 3e-17 Identities = 141/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||| || || || || || ||||| |||||||| || || |||||||| || Sbjct 6029452 GTGTAGACCTTCGTCACGCGAGATCAGTTCGTTTGAGAAAGTAAGGCCAGGCATGAGTCC 6029511 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 || ||||| | ||| | || | |||||| ||||||||||||||||| || || || Sbjct 6029512 TCGTTTCTTAAGCCAGAAGATTGAGCAGAAGCTTCCGGAGAAGAAGATACCTTCGACGCA 6029571 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || || | | ||||| ||||||| |||| | | || | ||||||||| || Sbjct 6029572 AGCGAAAGCTATGATTCGTTCAGCGAAGGTCTGAGA---TCCTTCGATCCATTTCATCGC 6029628 Query 122850 CCATTTCGCCTTCTTC 122865 ||| | || |||||| Sbjct 6029629 CCACTGAGCTTTCTTC 6029644 >seq11323 Length=362 Score = 96.9 bits (106), Expect = 4e-15 Identities = 187/276 (68%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 11617 TTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 11676 |||| | || || ||||| || ||||||| |||||||| || || || || ||| Sbjct 360 TTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGC 301 Query 11677 GATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTT 11736 | | || ||||| || || ||| |||||| ||||| ||||||||||| ||||| | Sbjct 300 TTTCTTGAAAAGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACTC 241 Query 11737 TGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAG 11796 | ||||| || ||| || ||| | |||||| || |||||| || | || Sbjct 240 AGAACCAGAGATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAAAG 181 Query 11797 GGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACT 11856 ||| || || ||||| || ||| || || | ||| ||||||||||||||| Sbjct 180 GGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCAAC 121 Query 11857 TCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCAC 11892 || | |||||||||| ||| | ||| ||||| Sbjct 120 CGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCAC 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627739870915200