Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq16 122 1e-22 seq9 120 4e-22 seq6 120 4e-22 seq11 116 4e-21 seq18 114 2e-20 seq20 113 5e-20 seq7 113 5e-20 seq17 111 2e-19 seq5 111 2e-19 seq4 111 2e-19 seq3 98.7 1e-15 seq14 96.9 4e-15 seq11323 84.2 3e-11 >seq16 Length=29110212 Score = 122 bits (134), Expect = 1e-22 Identities = 284/422 (67%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9615 |||||| || ||| | | ||| || || || | || | || ||| || | | ||||| Sbjct 4733070 ATCAAGAATGTCAGCTCTATTGGTTGCAGCAACAACGATAACACCAGTGTTACCTTCAAA 4733129 Query 9616 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9675 |||||||||||| || | || || || | || ||||| | ||||||||| || Sbjct 4733130 ACCATCCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATTACCT---CC 4733186 Query 9676 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732 |||| |||| | | |||| | || || ||||| || ||||||| ||||| ||||| Sbjct 4733187 ACCAATTCCAGTTCCTCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCA 4733246 Query 9733 TGGTTGATTTTCGCGAGC-GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 || || || || ||| ||| ||||| || || | ||| || ||||| | Sbjct 4733247 AGGAGCGTTCTCCTTGGCTTTCTTGAAA-AGATCACGGACTCTTGAGGCACCAACACCGA 4733305 Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850 |||||||||| ||||| | | | | | || | || ||| || ||| || |||||| Sbjct 4733306 CAAACATCTCAACAAACTCAGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCA 4733364 Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910 ||||||||| || | ||| || || || ||||| || ||| ||||| ||||| Sbjct 4733365 GCAATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCT 4733424 Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATT 9970 || |||||||| ||| || | | ||||| |||| ||| ||||| ||||| | | Sbjct 4733425 TTCGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAGAAACTCCACCACT 4733484 Query 9971 TC 9972 || Sbjct 4733485 TC 4733486 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 104705 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGAGTGGCAATTG 104763 |||| ||||||||||||||||||||||||||| |||| || || | || ||| || || Sbjct 22277959 TTCTATGCTCTCTGGATTCCAGATCTCTTCATGGAGAGGGTCCAGAGCGA-TGGGAAGTG 22278017 Query 104764 GTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGA 104823 ||| || ||||||||| || | || || ||| | | ||| | ||| | || ||||| Sbjct 22278018 GTCACTGTTTTGTCCAAACGAAGCTCCGGGTTTGGCAGATTGCTGGGGCGCTGAATTTGA 22278077 Query 104824 AGCCCTTTACACAAAGTACGA 104844 | || ||||| ||||| || Sbjct 22278078 GACACTGTACACGAAGTATGA 22278098 >seq9 Length=38094978 Score = 120 bits (132), Expect = 4e-22 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 94809 |||||||| | |||||||||| ||| | || | || | |||| ||||| ||| Sbjct 5074027 AAGAAAGCCCAGTGGGCTATGACATGGATCGACGGA---TCTCAAACCTTCGCTGAACGA 5073971 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869 || |||| || || || || || |||||||||||||| || ||||||| | || | Sbjct 5073970 ATCATCGCTTTCGCTTGCGTCGAAGGTATCTTCTTCTCCGGAAGCTTCTGCTCAATCTTC 5073911 Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||| ||| Sbjct 5073910 TGGCTTAAGAAACGAGGTCTCATGCCTGGCCTTACTTTCTCAAACGAACTGATCTCGCGT 5073851 Query 94930 GACGAGGGACTCCAC 94944 ||||| || || ||| Sbjct 5073850 GACGAAGGTCTACAC 5073836 Score = 84.2 bits (92), Expect = 3e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 104711 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGAGTGGCAATTGGTCTCT 104769 ||||||||||||||||||||||||||| |||| || || | || ||| || ||||| || Sbjct 32305654 GCTCTCTGGATTCCAGATCTCTTCATGGAGAGGGTCCAGAGCGA-TGGGAAGTGGTCACT 32305712 Query 104770 CTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCT 104829 ||||||||| || | || || ||| | | ||| | ||| | || ||||| | || Sbjct 32305713 GTTTTGTCCAAACGAAGCTCCGGGTTTGGCAGATTGCTGGGGCGCTGAATTTGAGACACT 32305772 Query 104830 TTACACAAAGTACGA 104844 ||||| ||||| || Sbjct 32305773 GTACACGAAGTATGA 32305787 >seq6 Length=26391736 Score = 120 bits (132), Expect = 4e-22 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 94809 |||||||| | ||||| ||||| ||| | || | || | |||| ||||| ||| Sbjct 4051214 AAGAAAGCTCAGTGGGCGATGAAATGGATCGACGGA---TCTCAGACCTTCGCTGAACGA 4051158 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869 || |||| || || || || || |||||||||||||| || ||||||| | || | Sbjct 4051157 ATCATCGCTTTCGCTTGCGTCGAAGGTATCTTCTTCTCCGGAAGCTTCTGCTCAATCTTC 4051098 Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 ||||| ||||||||||| |||||||| || || ||||| ||||| || ||||| ||| Sbjct 4051097 TGGCTTAAGAAGCGAGGACTCATGCCTGGCCTTACTTTCTCAAACGAACTCATCTCGCGT 4051038 Query 94930 GACGAGGGACTCCAC 94944 ||||| || || ||| Sbjct 4051037 GACGAAGGTCTACAC 4051023 >seq11 Length=49703607 Score = 116 bits (128), Expect = 4e-21 Identities = 253/371 (68%), Gaps = 12/371 (3%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| | |||||| | || || ||| ||||| | |||| | || || || Sbjct 35467606 CGGTCAAATCTACCTGGTCTCAGCAGTGCGGAGTCAAGAACATCAGGTCTGTTGGTTGCA 35467547 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | |||| | ||| | | | | ||| ||||||||||| |||||||| || ||| Sbjct 35467546 GCCAACACAATGACACCGGAATTACCAGAAAATCCATCCATCTCAGTCAAAAGCTGATTA 35467487 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 9701 || || ||||| | |||||||| | | | ||| ||||| | |||||| | || | Sbjct 35467486 ATCGTCTGTTCTCTCTCATCATTTCC--ACCTCCCATCCCAGCTCCTCGTTGCCTACCAA 35467429 Query 9702 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT--TCAAA 9759 | ||||||||||||||||| || || ||||| || ||||| || || ||||| Sbjct 35467428 CAGCATCAATCTCATCAATAAACACAATGCAGGG--AGCTTTCGATTTCGCCTTCTCAAA 35467371 Query 9760 GAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817 | ||||| || || || | || |||||||||||||| | ||| ||||| | | || Sbjct 35467370 CAAATCCC-TA-ACTCTAGACGCACCCACACCAACAAAAAGCTCAACAAACTCCGAAGCA 35467313 Query 9818 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 | ||| | |||||| || | ||| || || | |||| || | ||| ||||| Sbjct 35467312 GCACACGAAAAGAAGGGCACTCCTGCTTCTCCAGCTACAGCTCTAGCCAAAAGCGTCTTC 35467253 Query 9878 CCCGTACCTGG 9888 |||||||| || Sbjct 35467252 CCCGTACCCGG 35467242 >seq18 Length=20869551 Score = 114 bits (126), Expect = 2e-20 Identities = 199/282 (71%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672 ||| ||||||||||| |||||||| || ||||| || ||||| | |||||||| | Sbjct 6948822 AAATCCATCCATCTCAGTCAAAAGCTGATTAATCGTCTGTTCTCTCTCATCATTTCC--A 6948879 Query 9673 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 | | ||| ||||| | |||||| | || || ||||||||||||||||| || || ||| Sbjct 6948880 CCTCCCATCCCAGCTCCTCGTTGCCTACCAACAGCATCAATCTCATCAATAAACACAATG 6948939 Query 9731 CATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 9786 || || ||||| || || ||||| | ||||| || || || | || ||||| Sbjct 6948940 CAGGG--AGCTTTCGATTTCGCCTTCTCAAACAAATCCC-TA-ACTCTAGACGCACCCAC 6948995 Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846 ||||||||| | ||| ||||| | | || | ||| | |||||| || | ||| Sbjct 6948996 ACCAACAAAAAGCTCAACAAACTCCGAAGCAGCACACGAAAAGAAGGGCACTCCTGCTTC 6949055 Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 || || | |||| || | ||| ||||| |||||||| || Sbjct 6949056 TCCAGCTACAGCTCTAGCCAAAAGCGTCTTCCCCGTACCCGG 6949097 >seq20 Length=30099736 Score = 113 bits (124), Expect = 5e-20 Identities = 252/371 (68%), Gaps = 12/371 (3%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| | |||||| | ||| | ||| ||||| | |||| | || || || Sbjct 21057851 CGGTCAAATCTACCTGGTCTAAGCAATGCGGAGTCAAGAACATCAGGTCTGTTGGTTGCA 21057792 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | |||| | ||| | | | | ||| ||||||||||| |||||||| || ||| Sbjct 21057791 GCCAACACAATGACACCGGAATTACCAGAAAATCCATCCATCTCAGTCAAAAGCTGATTA 21057732 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 9701 || || ||||| | |||||||| | | | ||| ||||| | | |||| | || | Sbjct 21057731 ATCGTCTGTTCTCTCTCATCATTTCC--ACCTCCCATCCCAGCTCCTCTTTGCCTACCAA 21057674 Query 9702 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT--TCAAA 9759 | ||||||||||||||||| || || ||||| || ||||| || || ||||| Sbjct 21057673 CAGCATCAATCTCATCAATAAACACAATGCAGGG--AGCTTTCGATTTCGCCTTCTCAAA 21057616 Query 9760 GAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817 | ||||| || || || | || |||||||||||||| | ||| ||||| | | || Sbjct 21057615 CAAATCCC-TA-ACTCTAGACGCACCCACACCAACAAAAAGCTCAACAAACTCCGAAGCA 21057558 Query 9818 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 | ||| | |||||| || | ||| || || | |||| || | ||| ||||| Sbjct 21057557 GCACACGAAAAGAAGGGCACTCCTGCTTCTCCAGCTACAGCTCTAGCCAAAAGCGTCTTC 21057498 Query 9878 CCCGTACCTGG 9888 |||||||| || Sbjct 21057497 CCCGTACCCGG 21057487 >seq7 Length=33617777 Score = 113 bits (124), Expect = 5e-20 Identities = 282/422 (67%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9615 |||||| || || | | ||| || || || | || | || ||| || | | ||||| Sbjct 5165824 ATCAAGAATGTCTGCTCTATTGGTTGCAGCAACTACGATAACACCAGTGTTACCTTCAAA 5165883 Query 9616 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9675 |||||||||||| || | || || || | || ||||| | ||||||||| || Sbjct 5165884 ACCATCCATCTCAGTTAGGAGCTGATTGAGGGTCTGTTCTCTTTCATCATTACCT---CC 5165940 Query 9676 ACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732 |||| |||| | | |||| | || || ||||| || ||||||| ||||| ||||| Sbjct 5165941 ACCAATTCCAGTTCCTCTTTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCA 5166000 Query 9733 TGGTTGATTTTCGCGAGC-GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 || || || || ||| ||| ||||| || || | ||| || ||||| | Sbjct 5166001 AGGAGCGTTCTCCTTGGCTTTCTTGAAA-AGATCACGGACTCTTGAGGCACCAACACCGA 5166059 Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850 |||||||||| ||||| | | | | | || | || ||| || ||| || |||||| Sbjct 5166060 CAAACATCTCAACAAACTCAGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCA 5166118 Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910 ||||||||| || | ||| || || || ||||| || ||| ||||| ||||| Sbjct 5166119 GCAATGGCTTTTGCCAAAAGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCT 5166178 Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATT 9970 || |||||||| ||| || | | ||||| |||| ||| | ||| ||||| | | Sbjct 5166179 TTCGGGATCTTGGCACCAACCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCACCACT 5166238 Query 9971 TC 9972 || Sbjct 5166239 TC 5166240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 193/284 (68%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 9691 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 9750 |||| | || || ||||| || ||||||| ||||| ||||| || || || || Sbjct 5166351 TTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGC 5166410 Query 9751 GA-CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809 ||| ||| ||||| || || | ||| || ||||| ||||||||||| ||||| | Sbjct 5166411 TTTCTTGAAA-AGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACT 5166469 Query 9810 TTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868 | | | | || | || ||| || ||| || |||||| ||||||||| || | | Sbjct 5166470 CAGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAA 5166528 Query 9869 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 || || || || ||||| || ||| ||||| ||||| || |||||||| ||| Sbjct 5166529 AGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCA 5166588 Query 9929 CTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972 || | ||||||| |||| ||| | ||| ||||| | ||| Sbjct 5166589 ACCGCAGTGAATCTCTCGGGTTTCTTCAAAAACTCCACCACTTC 5166632 >seq17 Length=35492130 Score = 111 bits (122), Expect = 2e-19 Identities = 198/281 (70%), Gaps = 10/281 (4%) Strand=Plus/Plus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672 ||| ||||||||||||||||| | || |||||||| ||||||| |||||||| || Sbjct 29616877 AAACCCATCCATCTCTGTCAACAACTGATTAATAGTCTGTTCCCTCTCATCATTTCCT-- 29616934 Query 9673 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 | | ||| ||||| | | ||| | ||||| || ||||||||||||||||| || || Sbjct 29616935 CCTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAATACAATA 29616994 Query 9731 CATGGTTGATTTTCGC-GAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACA 9787 || || | ||| | ||| ||||| | ||||| || || || | || || ||| Sbjct 29616995 CAAGG-GGCTTTAGACTTAGCCTTCTCAAACAAATCCC-TA-ACTCTAGATGCACCAACA 29617051 Query 9788 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9847 || ||||| | ||||||||| | | ||| | ||| || ||| || || || ||| Sbjct 29617052 CCCACAAAAAGCTCCACAAACTCCGAGGCCGCACAAGAGAAGAACGGCACTCCAGCTTCC 29617111 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 || || | || | || | || |||||||||||||| || Sbjct 29617112 CCAGCCACCGCCCTAGCCAAGAGTGTCTTACCCGTACCGGG 29617152 Score = 98.7 bits (108), Expect = 1e-15 Identities = 246/368 (67%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 9611 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9670 |||||||||||||| || |||| || || |||| || ||||| | ||||||||| || Sbjct 2556527 TCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATTACCT 2556586 Query 9671 GGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACG 9727 |||| || | || | |||| | || || ||||| || ||||| | || || Sbjct 2556587 ---CCACCAATTCCTGTACCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACA 2556643 Query 9728 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCA 9785 ||||| || |||||| || || || ||||| || || |||| || || | Sbjct 2556644 ATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCACG--GACCCTTGATGCACCAA 2556701 Query 9786 CACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGAT 9844 |||||||||||||||| ||||| | | | | | || | | |||||| ||| || | Sbjct 2556702 CACCAACAAACATCTCAACAAACTCAGAACCCG-AGATGGAAAAGAAGGGTACACCAGCT 2556760 Query 9845 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9904 ||||| ||||||||| || | || || || || ||||| || ||| || || Sbjct 2556761 TCACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCTGTACCAGGAGGACCAATAAGAAGA 2556820 Query 9905 GCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCC 9964 | ||| || ||| ||| ||| || | | |||||||| | ||| ||||| ||| Sbjct 2556821 ACCCCTTTGGGGATCCGGGCACCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCC 2556880 Query 9965 ACAATTTC 9972 || | ||| Sbjct 2556881 ACCACTTC 2556888 >seq5 Length=34971402 Score = 111 bits (122), Expect = 2e-19 Identities = 301/454 (66%), Gaps = 10/454 (2%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 |||||||| || ||||| | | | || |||||| || || | | ||| || || Sbjct 11285952 CGATCAAACCGTCCTGGCCTCAACAAAGCAGAATCAAGAATGTCTGCTCTATTGGTTGCA 11286011 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | || | || ||| || | | ||||||||||||||||| || | || || || Sbjct 11286012 GCAACTACGATAACACCAGTGTTACCTTCAAAACCATCCATCTCAGTTAGGAGCTGATTG 11286071 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCC 9700 | || ||||| | ||||||||| || |||| || | | | |||| | || Sbjct 11286072 AGGGTCTGTTCTCTTTCATCATTACCT---CCACCAATTCCGGTCCCCCTTTGCCTACCG 11286128 Query 9701 ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC-GACTTCAAA 9759 || ||||| || ||||||| ||||| ||||| || || || || ||| ||| Sbjct 11286129 ACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGCTTTCTTGAAA 11286188 Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 ||||| || || | ||| || ||||| ||||||||||| ||||| | | | | Sbjct 11286189 -AGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACTCAGAACCAG- 11286246 Query 9820 ACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9878 | || | || ||| || ||| || |||||| ||||||||| || | ||| || || | Sbjct 11286247 AGATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAAAGGGTTTTCC 11286306 Query 9879 CCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGT 9938 | ||||| || ||| ||||| ||||| || |||||||| ||| || | Sbjct 11286307 CGGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCAACCGCAGTGA 11286366 Query 9939 ATCTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972 | ||||| |||| ||| | ||| ||||| | ||| Sbjct 11286367 ACCTCTCGGGTTTCTTCAAAAACTCCACCACTTC 11286400 >seq4 Length=30110606 Score = 111 bits (122), Expect = 2e-19 Identities = 142/195 (73%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 94809 |||||||| | ||||| ||||| ||| | || | || | |||| ||||| ||| Sbjct 6029643 AAGAAAGCTCAGTGGGCGATGAAATGGATCGAAGGA---TCTCAGACCTTCGCTGAACGA 6029587 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869 || | || || || || || || |||||||||||||| || ||||||| | || | Sbjct 6029586 ATCATAGCTTTCGCTTGCGTCGAAGGTATCTTCTTCTCCGGAAGCTTCTGCTCAATCTTC 6029527 Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 ||||| ||||| ||||| |||||||| || || ||||| ||||| || ||||| ||| Sbjct 6029526 TGGCTTAAGAAACGAGGACTCATGCCTGGCCTTACTTTCTCAAACGAACTGATCTCGCGT 6029467 Query 94930 GACGAGGGACTCCAC 94944 ||||| || || ||| Sbjct 6029466 GACGAAGGTCTACAC 6029452 >seq3 Length=28500605 Score = 98.7 bits (108), Expect = 1e-15 Identities = 196/282 (70%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672 ||| ||||||||||||||||| | || ||||| || ||||| | |||||||| || Sbjct 24326982 AAAGCCATCCATCTCTGTCAACAACTGATTAATGGTCTGTTCTCTCTCATCATTTCCT-- 24327039 Query 9673 CATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 | | ||| ||||| | | ||| | ||||| || ||||||||||||||||| || || Sbjct 24327040 CCTCCCATCCCAGCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAATACAATA 24327099 Query 9731 CATGGTTGATTTTCGC-GAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCACA 9787 || || | ||| | ||| || || | ||||| || || || | || |||||| Sbjct 24327100 CAAGG-GGCTTTAGACTTAGCCTTCTCGAACAAATCCC-TA-ACTCTAGATGCACCCACA 24327156 Query 9788 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9847 || || || | ||||||||| | | ||| | || || ||| || || || ||| Sbjct 24327157 CCCACGAAAAGCTCCACAAACTCCGAGGCAGCGCAGGAGAAGAACGGTACTCCAGCTTCC 24327216 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9889 || || | || | || | ||||||||||||||||| ||| Sbjct 24327217 CCAGCCACCGCCCTAGCCAAGAGAGTCTTACCCGTACCAGGC 24327258 Score = 89.7 bits (98), Expect = 6e-13 Identities = 244/368 (66%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 9611 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9670 |||||||||||||| || |||| || || |||| || ||||| | ||||||||| || Sbjct 2646617 TCAAAACCATCCATTTCAGTCAGGAGCTGATTAAGGGTCTGTTCTCTTTCATCATTACCT 2646676 Query 9671 GGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACG 9727 |||| || | | | |||| | || || ||||| || ||||| | || || Sbjct 2646677 ---CCACCAATTCCTGTTCCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACA 2646733 Query 9728 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCA 9785 ||||| || |||||| || || || ||||| || || |||| || || | Sbjct 2646734 ATGCACGGAGCATTTTCTTTGGCTTTTTTGAAAAGATCGCG--GACCCTTGATGCACCAA 2646791 Query 9786 CACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGAT 9844 |||| ||||||||||| ||||| | | | | | || | | |||||| ||| || | Sbjct 2646792 CACCGACAAACATCTCAACAAACTCAGAACCCG-AGATGGAAAAGAAGGGTACACCAGCT 2646850 Query 9845 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9904 ||||| ||||||||| || | || || || || ||||| || || ||||| Sbjct 2646851 TCACCAGCAATGGCTTTTGCTAACAGGGTTTTCCCAGTACCAGGAGGGCCAATAAGGAGA 2646910 Query 9905 GCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCC 9964 ||||| || ||| ||| ||| || | |||||||| | ||| ||||| ||| Sbjct 2646911 ACACCTTTGGGGATCCGGGCACCAACAGCAGTAAACCTCTCAGGCTTCTTCAGAAACTCC 2646970 Query 9965 ACAATTTC 9972 || | ||| Sbjct 2646971 ACCACTTC 2646978 >seq14 Length=31758599 Score = 96.9 bits (106), Expect = 4e-15 Identities = 298/455 (65%), Gaps = 12/455 (3%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || ||||| | || | ||| ||||| || || | | || || || Sbjct 2668007 CGGTCAAACCGCCCTGGTCTTAGCAAAGCGGAGTCAAGAATGTCTGCTCTGTTGGTTGCA 2668066 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | || | || ||| || | | |||||||||||||| || |||| || || || Sbjct 2668067 GCAACTACGATAACACCAGTGTTACCCTCAAAACCATCCATTTCAGTCAGGAGCTGATTT 2668126 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCC 9700 | || ||||| | ||||||||| || |||| || | || | |||| | || Sbjct 2668127 AGGGTCTGTTCTCTTTCATCATTACCT---CCACCAATTCCTGTACCTCTTTGCCTACCA 2668183 Query 9701 ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAG 9760 || ||||| || ||||| | || || ||||| || |||||| || || || Sbjct 2668184 ACAGCATCTATTTCATCTACAAAAACAATGCACGGAGCATTTTCTTTGGCTTTTTTGAAA 2668243 Query 9761 AGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9818 ||||| || || |||| || || ||||||||||||||||| ||||| | | | | Sbjct 2668244 AGATCACG--GACCCTTGATGCACCAACACCAACAAACATCTCAACAAACTCAGAACCCG 2668301 Query 9819 AACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 | || | | |||||| ||| || |||||| || |||||| || | || || || Sbjct 2668302 -AGATGGAAAAGAAGGGTACACCAGCTTCACCAGCGATGGCTTTTGCTAACAGGGTTTTC 2668360 Query 9878 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAG 9937 || ||||| || ||| ||||| | ||| || ||| ||| ||| || | Sbjct 2668361 CCAGTACCAGGAGGACCAATAAGGAGAACTCCTTTGGGGATCCGGGCACCAACAGCAGTG 2668420 Query 9938 TATCTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972 | |||||||| | ||| ||||| ||||| | ||| Sbjct 2668421 AACCTCTCAGGCTTCTTCAGAAACTCCACCACTTC 2668455 >seq11323 Length=362 Score = 84.2 bits (92), Expect = 3e-11 Identities = 192/284 (68%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 9691 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 9750 |||| | || || ||||| || ||||||| ||||| ||||| || || || || Sbjct 360 TTGCCTACCGACAGCATCTATTTCATCAACAAAGACAATGCAAGGAGCGTTCTCCTTGGC 301 Query 9751 GA-CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809 ||| ||| ||||| || || | ||| || ||||| ||||||||||| ||||| | Sbjct 300 TTTCTTGAAA-AGATCACGGACTCTTGAGGCACCAACACCGACAAACATCTCAACAAACT 242 Query 9810 TTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868 | | | | || | || ||| || ||| || |||||| ||||||||| || | | Sbjct 241 CAGAACCAG-AGATGGAGAAGAAAGGCACACCAGCTTCACCAGCAATGGCTTTTGCCAAA 183 Query 9869 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 || || || || ||||| || ||| ||||| ||||| || |||||||| ||| Sbjct 182 AGGGTTTTCCCGGTACCAGGAGGACCAATAAGGAGAACACCTTTCGGGATCTTGGCACCA 123 Query 9929 CTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972 || | | ||||| |||| ||| | ||| ||||| | ||| Sbjct 122 ACCGCAGTGAACCTCTCGGGTTTCTTCAAAAACTCCACCACTTC 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582989496238880