Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq36 655 0.0 seq16 655 0.0 seq18 504 8e-138 seq4 266 4e-66 seq7 109 7e-19 seq9 104 3e-17 >seq36 Length=171746 Score = 655 bits (726), Expect = 0.0 Identities = 745/994 (75%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| ||||| ||| | || ||||| || | || ||||||||||| || Sbjct 56624 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 56565 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGTTTC-ATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||||| || |||| ||| | |||||||| Sbjct 56564 ATGATCCCTACCTTATTGACCGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCC 56506 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 56505 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 56446 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||| ||||| || ||||| ||||| ||||||||| | || || || || || Sbjct 56445 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 56386 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 ||||||||| || || | ||||| ||||| ||||| |||||||||| |||| || | Sbjct 56385 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGT 56326 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | ||||| | | ||| | | || ||||||||||||||||||||| || ||| Sbjct 56325 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 56266 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016 || ||||||||||| ||||| ||| ||||| || ||||| || || || || |||| Sbjct 56265 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 56206 Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076 ||| ||| | | ||||| | ||||| || ||| ||||| | |||||| || || || Sbjct 56205 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 56146 Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136 | ||| || ||||||| ||| |||| ||||| || ||||||||||| || |||||||| Sbjct 56145 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 56086 Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 || |||||||| || || |||||||| || || || || || || ||||| ||||| || Sbjct 56085 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 56026 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255 ||| |||| ||||| | | | | || | |||||||| || || ||| | || | | Sbjct 56025 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 55967 Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315 |||||| ||||| ||||||||||| || |||||||| || |||||||| ||||| || | Sbjct 55966 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 55907 Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375 | || ||||||||||||| || |||||||| || ||||| | || |||||| | | Sbjct 55906 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 55847 Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435 | || ||||| || || ||||| ||||| |||||| | ||| |||| || ||||| |||| Sbjct 55846 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 55787 Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495 |||| || |||||||| |||||||| || | | |||||||| || || | || | Sbjct 55786 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 55727 Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555 | ||||| || || | ||||||||| |||||||||||||| ||||| || ||||||| Sbjct 55726 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 55667 Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGCTGCTGA 178589 |||||||||||||||| ||||| ||||||| ||| Sbjct 55666 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 55633 Score = 554 bits (614), Expect = 5e-153 Identities = 733/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| |||||||| ||| Sbjct 115915 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 115856 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || |||||| ||| || | || | || |||||| |||| || ||||| || Sbjct 115855 CTATTGCTTTTCCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 115796 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || ||||||||||| ||| | || ||| ||| | || || || ||||| | Sbjct 115795 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 115736 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || ||||| || || ||||||||| | | | | ||||| | | | || |||||| Sbjct 115735 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 115676 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || |||||||| || ||| ||| | || || || ||| ||||||| Sbjct 115675 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGGCTTTTGTT 115616 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 || |||||||| || ||||| | |||||||| ||| | || || |||||| | || || Sbjct 115615 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 115556 Query 179198 TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGT 179257 ||| || | | || ||||| ||||||||||| || |||||||| |||||||| ||||| Sbjct 115555 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 115497 Query 179258 GTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGG 179317 ||||| || || || ||||| || || || || |||||||||||||| ||||| Sbjct 115496 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 115437 Query 179318 AGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAA 179377 || || || || || || ||| | ||||| | || || || || || ||||| | || Sbjct 115436 TGTAGCCGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 115377 Query 179378 CCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCA 179437 ||| || || |||||||| || || ||| | ||||||| || |||| || || ||||| Sbjct 115376 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 115317 Query 179438 TGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGC 179497 ||||||||| ||||| || || | |||||||| |||| ||||||||||| || Sbjct 115316 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 115257 Query 179498 ATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTC 179557 || | || || |||| || || || ||||| ||||| || || ||||| || ||||| Sbjct 115256 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 115197 Query 179558 TCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGT 179617 || |||||||| | || || |||||| |||||| |||||||||||||||| ||||| Sbjct 115196 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 115137 Query 179618 TCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677 || || | ||| | |||| | |||| | | ||||| || | ||||| | Sbjct 115136 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 115077 Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737 || |||||||| ||||| ||||| ||| | || || || ||||| || || ||||| || Sbjct 115076 TGCCTATGACTTCGTTTCCCAAGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTT 115017 Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797 |||||| || || || || || || |||||| | |||||||||||||| | ||||| Sbjct 115016 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 114957 Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 || ||||||||| || |||| ||||| || || | ||| | || |||||||| Sbjct 114956 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 114903 Score = 542 bits (600), Expect = 3e-149 Identities = 730/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | |||||| || | | | || || ||||||||||| |||||||| ||| Sbjct 48842 TTTGATATTATGGATGACCGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 48901 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || || |||||| ||| || | | | || |||||| |||| || ||||| || Sbjct 48902 CTATAGCTCTTCCCTTGTGCCTATTTCTCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 48961 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || ||||||||||| ||| | || ||| ||| | || || || ||||| | Sbjct 48962 GTAACTTCATGGTATACTCATGGGTTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 49021 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || ||||| || || ||||||||| | | | | ||||| | | | || |||||| Sbjct 49022 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 49081 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || |||||||| || ||| ||| | || || || ||| ||||||| Sbjct 49082 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGGCTTTTGTT 49141 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 || |||||||| || ||||| | |||||||| ||| | || || |||||| | || || Sbjct 49142 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 49201 Query 179198 TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGT 179257 ||| || | | || ||||| ||||||||||| || |||||||| |||||||| ||||| Sbjct 49202 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 49260 Query 179258 GTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGG 179317 ||||| || || || ||||| || || || || |||||||||||||| ||||| Sbjct 49261 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 49320 Query 179318 AGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAA 179377 || || || || || || ||| | ||||| | || || || || || ||||| | || Sbjct 49321 TGTAGCCGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 49380 Query 179378 CCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCA 179437 ||| || || |||||||| || || ||| | ||||||| || |||| || || ||||| Sbjct 49381 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 49440 Query 179438 TGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGC 179497 ||||||||| ||||| || || | |||||||| |||| ||||||||||| || Sbjct 49441 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 49500 Query 179498 ATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTC 179557 || | || || |||| || || || ||||| ||||| || || ||||| || ||||| Sbjct 49501 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 49560 Query 179558 TCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGT 179617 || |||||||| | || || |||||| |||||| |||||||||||||||| ||||| Sbjct 49561 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 49620 Query 179618 TCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677 || || | ||| | |||| | |||| | | ||||| || | ||||| | Sbjct 49621 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 49680 Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737 || |||||||| ||||| ||||| ||| | || || || ||||| || || ||||| || Sbjct 49681 TGCCTATGACTTCGTTTCCCAAGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTT 49740 Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797 |||||| || || || || || || |||||| | |||||||||||||| | ||||| Sbjct 49741 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 49800 Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 || ||||||||| || |||| ||||| || || | ||| | || |||||||| Sbjct 49801 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 49854 Score = 295 bits (326), Expect = 8e-75 Identities = 446/633 (70%), Gaps = 5/633 (1%) Strand=Plus/Plus Query 179220 AATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCT 179279 ||||||||||| || ||| |||| |||||||| ||||| ||| | || || | |||| Sbjct 50662 AATGCAATCGCATTCTCTAGTCCCATTGCTGTTTTTGTTTCTATCTTCCTACTTAATCCA 50721 Query 179280 CTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTC 179339 || | | || |||||||||||||| ||||| || | | || || || ||| Sbjct 50722 CTAAGTCGATCTGGCTGGTTCTTTGCGCCTAGTTTTGGTGTAGTCTCTATATTTCGATTC 50781 Query 179340 --CTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAACCCGTTCCACATGATGGGTG 179397 ||| | |||| | || || || || |||| | ||||| || || |||||||| | Sbjct 50782 ACCTATTTTTCCAA---GGGTTTCATAATTGGAAATTGAACCCATTTCATATGATGGGAG 50838 Query 179398 TAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCATGGTGCTACAGTAGAGAACA 179457 | || ||| | ||||||| || |||| || | |||||||||||||| ||||| || | Sbjct 50839 TCGCCGGTGTACTGGGCGCGGCTCTGCTATGCACTATTCATGGTGCTACTGTAGAAAATA 50898 Query 179458 CACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGCATTCGAGCCTACACAAGAAG 179517 | | |||||||| |||| ||||||||||| || || | || || |||| | Sbjct 50899 CTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCG 50958 Query 179518 AGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCTCAGATCTTTGGTATCGCCT 179577 | || || ||||| ||||| || || ||||| || ||||| || |||||||| | || | Sbjct 50959 AAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTT 51018 Query 179578 TCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGA 179637 | |||||| |||||| |||||||||||||||| ||||| || || | ||| | |||| Sbjct 51019 TTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGA 51078 Query 179638 CCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAGAGCTTATGACTTTGTTTCAC 179697 | |||| | | || || || | ||||| | || |||||||||||||| | Sbjct 51079 TGAGTGCTCTTGGAGTAGTCGGCCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCC 51138 Query 179698 AAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAGAACATCCTAT 179757 | || ||| | | | || ||||| || || |||| |||||||| || || || || | Sbjct 51139 AGGAAATCTGTGTAGTGGAAGATCCGGAATTTAAGACTTTCTATACTAAAAATATTCTTT 51198 Query 179758 TGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCAACCACATGAAAACTTTGTAT 179817 | || |||||| | ||||||||| ||| | ||||| || ||||||||| || ||| Sbjct 51199 TAAACGAAGGTATTCGTGCTTGGCTGGTGGCTCAAGATCAGCCTCATGAAAACCTTATAT 51258 Query 179818 TTCCTGAAGAAGTATTGCCAAGAGGCAACGCTC 179850 | ||||| || || | ||| | || ||||||| Sbjct 51259 TCCCTGAGGAGGTTGTACCACGTGGAAACGCTC 51291 >seq16 Length=29110212 Score = 655 bits (726), Expect = 0.0 Identities = 745/994 (75%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| ||||| ||| | || ||||| || | || ||||||||||| || Sbjct 16535130 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 16535189 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGTTTC-ATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||||| || |||| ||| | |||||||| Sbjct 16535190 ATGATCCCTACCTTATTGACCGCAACT-TCTGTTTTTATTATCGCATTCATTGCTGCTCC 16535248 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 16535249 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAA 16535308 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||| ||||| || ||||| ||||| ||||||||| | || || || || || Sbjct 16535309 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 16535368 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 ||||||||| || || | ||||| ||||| ||||| |||||||||| |||| || | Sbjct 16535369 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGT 16535428 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | ||||| | | ||| | | || ||||||||||||||||||||| || ||| Sbjct 16535429 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 16535488 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016 || ||||||||||| ||||| ||| ||||| || ||||| || || || || |||| Sbjct 16535489 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 16535548 Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076 ||| ||| | | ||||| | ||||| || ||| ||||| | |||||| || || || Sbjct 16535549 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 16535608 Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136 | ||| || ||||||| ||| |||| ||||| || ||||||||||| || |||||||| Sbjct 16535609 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 16535668 Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 || |||||||| || || |||||||| || || || || || || ||||| ||||| || Sbjct 16535669 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 16535728 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255 ||| |||| |||| || | | | || | |||||||| || || ||| | || | | Sbjct 16535729 TTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 16535787 Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315 |||||| ||||| ||||||||||| || |||||||| || |||||||| ||||| || | Sbjct 16535788 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 16535847 Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375 | || ||||||||||||| || |||||||| || ||||| | || |||||| | | Sbjct 16535848 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 16535907 Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435 | || ||||| || || ||||| ||||| |||||| | ||| |||| || ||||| |||| Sbjct 16535908 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 16535967 Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495 |||| || |||||||| |||||||| || | | |||||||| || || | || | Sbjct 16535968 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 16536027 Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555 | ||||| || || | ||||||||| |||||||||||||| ||||| || ||||||| Sbjct 16536028 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 16536087 Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGCTGCTGA 178589 |||||||||||||||| ||||| ||||||| ||| Sbjct 16536088 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 16536121 Score = 109 bits (120), Expect = 7e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211 ||||||||| ||||| || |||| ||||| ||||||||||| ||| | || | Sbjct 27107517 TTGAGTGTGACGACGACGTCTACGTTCTTGATGCCGCTGAGGAAGCTGGAATCGACTTGC 27107576 Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271 ||||| ||||| |||||| | |||||||| ||||| || ||| | | || || | | Sbjct 27107577 CTTACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAAAGTTACGTCTGGATCTG 27107636 Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331 | || || || || |||||||||||||||||||| | || ||| || |||| | Sbjct 27107637 TTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGGCTGAAGGGTTTGTTCTCA 27107696 Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386 ||||||| | || ||||| ||| | ||||| || | |||||||| || Sbjct 27107697 CTTGTGTGGCGTACCCTACTTCTGATGTTACCATTGAAACCCACAAAGAAGACGA 27107751 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 178526 TTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCTGCTG 178585 ||||||||||||| ||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct 26298428 TTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTG 26298487 Query 178586 CTG 178588 || Sbjct 26298488 TTG 26298490 >seq18 Length=20869551 Score = 504 bits (558), Expect = 8e-138 Identities = 564/751 (75%), Gaps = 2/751 (0%) Strand=Plus/Minus Query 177840 GGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTATCTT 177899 |||||| || || | ||||| ||||| |||| |||||||||| |||| || | | Sbjct 2057535 GGAAGCTGCATCCGTTGATGAATGGCTACACAACGGTGGTCCTTATGAACTAATTGTTCT 2057476 Query 177900 CCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCGCCT 177959 ||||| | | ||| | | || ||||||||||||||||||||| || ||| || Sbjct 2057475 ACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 2057416 Query 177960 AGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGT 178019 ||||||||||| ||||| ||| ||||| || ||||| || || | || ||||||| Sbjct 2057415 GGGTATGCGTCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGTTGCGACTGCTGT 2057356 Query 178020 ATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAG 178079 ||| | | ||||| | ||||| || ||| ||||| | |||||| || || ||| Sbjct 2057355 TTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 2057296 Query 178080 TGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTT 178139 ||| || ||||||| ||| |||| ||||| || ||||||||||| || |||||||| || Sbjct 2057295 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 2057236 Query 178140 CCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTC 178199 |||||||| || || |||||||| || || || || || || ||||| ||||| ||||| Sbjct 2057235 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 2057176 Query 178200 TCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATGGTT 178258 |||| ||||| | | | | || | |||||||| || || ||| | || | |||| Sbjct 2057175 CTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 2057117 Query 178259 ACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTC 178318 ||| ||||| ||||||||||| || |||||||| || |||||||| ||||| || || | Sbjct 2057116 ACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCC 2057057 Query 178319 GCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAG 178378 | ||||||||||||| || |||||||| || ||||| | || |||||| | || | Sbjct 2057056 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGG 2056997 Query 178379 CATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACC 178438 | ||||| || || ||||| ||||| |||||| | ||| |||| || ||||| ||||||| Sbjct 2056996 CTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACC 2056937 Query 178439 TCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCT 178498 | || |||||||| |||||||| || | | |||||||| || || | || || | Sbjct 2056936 TAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTT 2056877 Query 178499 GGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTC 178558 |||| || || | ||||||||| |||||||||||||| ||||| || |||||||||| Sbjct 2056876 GGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 2056817 Query 178559 ACAACTTCCCTCTTGACCTCGCTGCTGCTGA 178589 ||||||||||||| ||||| ||||||| ||| Sbjct 2056816 ACAACTTCCCTCTAGACCTAGCTGCTGTTGA 2056786 Score = 284 bits (314), Expect = 1e-71 Identities = 282/365 (77%), Gaps = 0/365 (0%) Strand=Plus/Minus Query 178225 GAAACCACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 178284 |||||||| || || ||| | || | ||||||| ||||| ||||||||||| || Sbjct 2056505 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 2056446 Query 178285 TACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 178344 |||||||| || |||||||| ||||| || || || ||||||||||||| || ||| Sbjct 2056445 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 2056386 Query 178345 AACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTC 178404 ||||| || ||||| | || |||||| | || || ||||| || || ||||| ||||| Sbjct 2056385 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 2056326 Query 178405 ACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCC 178464 |||||| | ||| |||| || ||||| |||||||| || |||||||| |||||||| || Sbjct 2056325 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 2056266 Query 178465 ATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGT 178524 | | |||||||| || || | || || ||||| || || | ||||||||| Sbjct 2056265 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 2056206 Query 178525 CTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCTGCT 178584 |||||||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||| Sbjct 2056205 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 2056146 Query 178585 GCTGA 178589 | ||| Sbjct 2056145 GTTGA 2056141 >seq4 Length=30110606 Score = 266 bits (294), Expect = 4e-66 Identities = 305/410 (74%), Gaps = 0/410 (0%) Strand=Plus/Minus Query 179214 CCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATG 179273 ||||| ||||||||||| || |||||||| |||||||| ||||| ||||| || || || Sbjct 15118881 CCTTATAATGCAATCGCATTATCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATT 15118822 Query 179274 TATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGGAGTTGCAGCGATTTTC 179333 ||||| || || || || |||||||||||||| ||||| || ||||| || || Sbjct 15118821 TATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTT 15118762 Query 179334 CGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAACCCGTTCCACATGATG 179393 || ||| | ||||| | || || || || || ||||| | ||||| || || |||||| Sbjct 15118761 CGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATG 15118702 Query 179394 GGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCATGGTGCTACAGTAGAG 179453 || || || ||| | ||||||| || |||| || || |||||||||||||| ||||| Sbjct 15118701 GGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAA 15118642 Query 179454 AACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGCATTCGAGCCTACACAA 179513 || || | |||||||| || | ||||||||||| || || | || || ||| Sbjct 15118641 AATACTTTATTTGAAGATGGTAATGGTGCAAATACATTCTGTGCTTTTAACCCAACTCAA 15118582 Query 179514 GAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCTCAGATCTTTGGTATC 179573 | || || || ||||| ||||| || || ||||| || ||||| || |||||||| | Sbjct 15118581 GCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTT 15118522 Query 179574 GCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCCTGT 179623 || || |||||| ||||| |||||||||||||||| ||||| || || Sbjct 15118521 GCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGTACCAGT 15118472 >seq7 Length=33617777 Score = 109 bits (120), Expect = 7e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211 ||||||||| ||||| || |||| ||||| ||||||||||| ||| | || | Sbjct 31470568 TTGAGTGTGACGACGACGTCTACGTTCTTGATGCCGCTGAGGAAGCTGGAATCGACTTGC 31470627 Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271 ||||| ||||| |||||| | |||||||| ||||| || ||| | | || || | | Sbjct 31470628 CTTACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAAAGTTACGTCTGGATCTG 31470687 Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331 | || || || || |||||||||||||||||||| | || ||| || |||| | Sbjct 31470688 TTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGGCTGAAGGGTTTGTTCTCA 31470747 Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386 ||||||| | || ||||| ||| | ||||| || | |||||||| || Sbjct 31470748 CTTGTGTGGCGTACCCTACTTCTGATGTTACCATTGAAACCCACAAAGAAGACGA 31470802 >seq9 Length=38094978 Score = 104 bits (114), Expect = 3e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211 ||||||||| ||||| || |||| ||||| ||||||||||| ||| | || | Sbjct 36084662 TTGAGTGTGACGACGACATCTACGTTCTTGATGCCGCTGAGGAAGCTGGAATCGACTTGC 36084721 Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271 ||||| ||||| |||||| | |||||||| || || || ||| | | || || | | Sbjct 36084722 CTTACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGCGCTGGTAAAGTTGTGTCTGGATCTG 36084781 Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331 | || || || || |||||||||||||||||||| ||| ||| || |||| | Sbjct 36084782 TTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATGAATGAAGGGTTTGTTCTCA 36084841 Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386 ||||||| | || ||||| ||| | ||||| || | |||||||| || Sbjct 36084842 CTTGTGTGGCTTACCCTACTTCTGATGTTACCATTGAAACCCACAAAGAAGACGA 36084896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596029827705920