Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq36 628 3e-175 seq16 628 3e-175 seq18 489 2e-133 seq4 284 1e-71 >seq36 Length=171746 Score = 628 bits (696), Expect = 3e-175 Identities = 735/993 (74%), Gaps = 0/993 (0%) Strand=Plus/Minus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| ||||| |||||| |||||||| || | || |||||||| || || Sbjct 56624 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 56565 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || ||| || ||||| ||||| | |||||| Sbjct 56564 ATGATCCCTACCTTATTGACCGCAACTTCTGTTTTTATTATCGCATTCATTGCTGCTCCT 56505 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || ||||| ||| |||| ||||| | || || ||||| Sbjct 56504 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 56445 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || || || ||||| || | || |||| || || ||| | || || || || ||| Sbjct 56444 ATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 56385 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| ||| | ||||||||| | |||||||||||||||| |||| |||| Sbjct 56384 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 56325 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | ||||| | | || | | ||| |||||||||||||||||| | | ||| Sbjct 56324 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 56265 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 ||||||||||| |||||||| |||||| || || ||||| ||||| || || | ||| Sbjct 56264 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 56205 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || |||| || |||| || || || ||||| | ||||||||| || ||| Sbjct 56204 GTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 56145 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || |||| ||| | || ||||| |||||||||||||| || |||||||| Sbjct 56144 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 56085 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 || |||||| | ||||| || || || || || || || || ||||| || ||||| ||| Sbjct 56084 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 56025 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | | || ||||| ||| | || | |||||||| || || || || || | ||| Sbjct 56024 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 55965 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 |||| ||||| ||||||||||| || |||||||| || || ||||||||||| || || Sbjct 55964 TACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 55905 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || ||||||||||||| ||| |||||||| || ||||| | || |||||| | || Sbjct 55904 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 55845 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || ||||| || || || || ||||| || ||| | ||| | || ||||| |||||| Sbjct 55844 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 55785 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 || || |||||||| |||||||| || | | ||| |||| || ||||| | || || Sbjct 55784 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 55725 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || || | ||||||||| ||||| |||||||| ||||| || ||||||||| Sbjct 55724 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 55665 Query 170312 CACAACTTCCCTCTCGACCTCGCTGCTGCTGAG 170344 |||||||||||||| ||||| ||||||| |||| Sbjct 55664 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 55632 Score = 524 bits (580), Expect = 9e-144 Identities = 723/1009 (72%), Gaps = 2/1009 (0%) Strand=Plus/Minus Query 170605 TGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTT 170664 ||||||||||| | | || || || || ||||| || |||||||| || | |||| Sbjct 115905 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTTT 115846 Query 170665 TTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTT 170724 | || ||| ||| | || | || || ||| | || || || || ||||| || | Sbjct 115845 TCCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 115786 Query 170725 GGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAATTTCCTTACAGCGGCTG 170784 |||| || || || | || ||||| || | |||||| ||||| | || || || | Sbjct 115785 GGTATACTCATGGGTTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAG 115726 Query 170785 TGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 170844 | || || |||||| || | | | |||||| | | |||| ||||||||||| | | Sbjct 115725 TTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCAC 115666 Query 170845 AGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 170904 | || ||||| || |||| ||| | || || || ||| |||||| || ||||||| Sbjct 115665 AAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGGCTTTTGTTGCTCTCCACG 115606 Query 170905 GAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTCG-TCTCGTAGGG 170963 | || || || | |||||||| ||| | || || |||||| | ||| ||| || Sbjct 115605 GCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCT-GTTCAA 115547 Query 170964 ATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTC 171023 | |||| || ||||||||||| ||||||||||| || ||||| ||||| || ||| Sbjct 115546 TTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTC 115487 Query 171024 CTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCA 171083 || || ||||| || || || || |||||||||| || ||| ||||| || || || Sbjct 115486 CTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCCGCT 115427 Query 171084 ATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCAT 171143 || || || ||| | ||||| | ||||| || || || |||||| |||| ||||||||| Sbjct 115426 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 115367 Query 171144 ATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACA 171203 |||||||| || || ||| | || |||| || |||| | || |||||||||| ||| Sbjct 115366 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 115307 Query 171204 GTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACG 171263 ||||| |||||||| | ||||||||||||| ||||| || || || ||| || | Sbjct 115306 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 115247 Query 171264 ACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTT 171323 ||||| | ||||| || ||||| |||||||| ||||| || || ||||| || || ||| Sbjct 115246 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 115187 Query 171324 GGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATG 171383 || | || || |||||| |||||||| |||||||||||| | ||||| || || | Sbjct 115186 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 115127 Query 171384 GGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGAT 171443 ||| | ||| | ||| ||| || | | ||||| ||| | || || | || ||||| Sbjct 115126 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 115067 Query 171444 TTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAG 171503 ||||| || || || | ||||| |||||||| || || ||||| |||||||| || Sbjct 115066 TTCGTTTCCCAAGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAA 115007 Query 171504 AACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAA 171563 || || || || || |||||| ||||||| |||||||| | ||| || || |||||| Sbjct 115006 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 114947 Query 171564 AACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 ||| || | ||||| ||||| |||||||| ||||| || || |||| || Sbjct 114946 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 114898 Score = 506 bits (560), Expect = 2e-138 Identities = 707/989 (71%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 170625 GATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCA 170684 || || || || ||||| || |||||||| || || || || ||| ||| | | Sbjct 48872 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATAGCTCTTCCCTTGTGCCTATTTCTCT 48931 Query 170685 ATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTTGGTACACCCACGGACTTGCA 170744 | || || ||| | || || || || ||||| || ||||| || || || | || Sbjct 48932 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGGTTGGCC 48991 Query 170745 AGTTCGTACCTTGAAGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCT 170804 ||||| || | |||||| ||||| | || || || || || || |||||| || | Sbjct 48992 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 49051 Query 170805 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGG 170864 | | |||||| | | |||| ||||||||||| | || || ||||| || ||| Sbjct 49052 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 49111 Query 170865 TTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGT 170924 | ||| | || || || ||| |||||| || |||||||| || || || | |||||| Sbjct 49112 TGTCAATTAGGTGGTCTGTGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 49171 Query 170925 TTCATGCTTCGGCAGTTTGAAATCAGTCG-TCTCGTAGGGATTAGACCGTACAATGCAAT 170983 || ||| | || || |||||| | ||| ||| || | |||| || |||||||| Sbjct 49172 TTTATGTTACGTCAATTTGAACTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAAT 49230 Query 170984 CGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCA 171043 ||| ||||||||||| || ||||| ||||| || ||||| || ||||| || || || Sbjct 49231 CGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCA 49290 Query 171044 GTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTT 171103 || |||||||||| || ||| ||||| || || || || || || ||| | ||||| Sbjct 49291 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCCGCTATATTTCGATTCATCCTCTT 49350 Query 171104 CCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTTGCAGGTAT 171163 | ||||| || || || |||||| |||| ||||||||||||||||| || || ||| | Sbjct 49351 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGT 49410 Query 171164 CCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGA 171223 || |||| || |||| | || |||||||||| ||| ||||| |||||||| | ||| Sbjct 49411 ACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGA 49470 Query 171224 AGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCAGGAGGAAGAGACATA 171283 |||||||||| ||||| || || || ||| || | ||||| | ||||| || || Sbjct 49471 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 49530 Query 171284 TTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAA 171343 ||| |||||||| ||||| || || ||||| || || ||||| | || || |||||| Sbjct 49531 TTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 49590 Query 171344 GCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCT 171403 |||||||| |||||||||||| | ||||| || || | ||| | ||| | ||| ||| Sbjct 49591 ACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCT 49650 Query 171404 GGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAG 171463 || | | ||||| ||| | || || | || ||||| ||||| || || || | Sbjct 49651 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAAGAAATCCG 49710 Query 171464 AGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGG 171523 ||||| |||||||| || || ||||| |||||||| || || || || || || ||||| Sbjct 49711 TGCAGCGGAAGATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 49770 Query 171524 TCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGA 171583 | ||||||| |||||||| | ||| || || ||||||||| || | ||||| ||||| Sbjct 49771 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 49830 Query 171584 AGTTCTACCTCGTGGCAATGCACTTTGAT 171612 |||||||| ||||| || || |||| || Sbjct 49831 GGTTCTACCACGTGGAAACGCTCTTTAAT 49859 Score = 316 bits (350), Expect = 2e-81 Identities = 453/637 (71%), Gaps = 1/637 (0%) Strand=Plus/Plus Query 170976 AATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCT 171035 ||||||||||| |||||| |||| || ||||| ||||| | ||||| | |||| Sbjct 50662 AATGCAATCGCATTCTCTAGTCCCATTGCTGTTTTTGTTTCTATCTTCCTACTTAATCCA 50721 Query 171036 CTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTC 171095 || | | || | |||||||| || ||| ||||| || | | || || || ||| Sbjct 50722 CTAAGTCGATCTGGCTGGTTCTTTGCGCCTAGTTTTGGTGTAGTCTCTATATTTCGATTC 50781 Query 171096 CTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTT 171155 || || | ||||| || || || |||| | |||| ||||||||||||||||| || Sbjct 50782 AC-CTATTTTTCCAAGGGTTTCATAATTGGAAATTGAACCCATTTCATATGATGGGAGTC 50840 Query 171156 GCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACT 171215 || ||| | || |||| || |||| | | |||||||||| ||| ||||| |||||| Sbjct 50841 GCCGGTGTACTGGGCGCGGCTCTGCTATGCACTATTCATGGTGCTACTGTAGAAAATACT 50900 Query 171216 TTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCAGGAGGAA 171275 || | ||||||||||||| ||||| || || || ||| || | ||||| | ||| Sbjct 50901 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAA 50960 Query 171276 GAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTC 171335 || || ||||| |||||||| ||||| || || ||||| || || ||||| | || || Sbjct 50961 GAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTT 51020 Query 171336 AGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTC 171395 |||||| |||||||| |||||||||||| | ||||| || || | ||| | ||| | Sbjct 51021 TCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATG 51080 Query 171396 AGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAG 171455 ||| ||| || | | || || ||| | || || | || ||||| || || ||| Sbjct 51081 AGTGCTCTTGGAGTAGTCGGCCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCCAG 51140 Query 171456 GAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTG 171515 || || | | || |||||||| || || |||| |||||||| || || || || || Sbjct 51141 GAAATCTGTGTAGTGGAAGATCCGGAATTTAAGACTTTCTATACTAAAAATATTCTTTTA 51200 Query 171516 AATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTC 171575 || |||||| ||||||| ||| ||| | ||| || || ||||||||| || | ||| Sbjct 51201 AACGAAGGTATTCGTGCTTGGCTGGTGGCTCAAGATCAGCCTCATGAAAACCTTATATTC 51260 Query 171576 CCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 || ||||| ||| |||| ||||| || || | || || Sbjct 51261 CCTGAGGAGGTTGTACCACGTGGAAACGCTCATTAAT 51297 >seq16 Length=29110212 Score = 628 bits (696), Expect = 3e-175 Identities = 735/993 (74%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| ||||| |||||| |||||||| || | || |||||||| || || Sbjct 16535130 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTCGGTGTTTTG 16535189 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || ||| || ||||| ||||| | |||||| Sbjct 16535190 ATGATCCCTACCTTATTGACCGCAACTTCTGTTTTTATTATCGCATTCATTGCTGCTCCT 16535249 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || ||||| ||| |||| ||||| | || || ||||| Sbjct 16535250 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 16535309 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || || || ||||| || | || |||| || || ||| | || || || || ||| Sbjct 16535310 ATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 16535369 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| ||| | ||||||||| | |||||||||||||||| |||| |||| Sbjct 16535370 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 16535429 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | ||||| | | || | | ||| |||||||||||||||||| | | ||| Sbjct 16535430 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 16535489 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 ||||||||||| |||||||| |||||| || || ||||| ||||| || || | ||| Sbjct 16535490 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 16535549 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || |||| || |||| || || || ||||| | ||||||||| || ||| Sbjct 16535550 GTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 16535609 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || |||| ||| | || ||||| |||||||||||||| || |||||||| Sbjct 16535610 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 16535669 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 || |||||| | ||||| || || || || || || || || ||||| || ||||| ||| Sbjct 16535670 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 16535729 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | | || ||||| ||| | || | |||||||| || || || || || | ||| Sbjct 16535730 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 16535789 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 |||| ||||| ||||||||||| || |||||||| || || ||||||||||| || || Sbjct 16535790 TACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 16535849 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || ||||||||||||| ||| |||||||| || ||||| | || |||||| | || Sbjct 16535850 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 16535909 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || ||||| || || || || ||||| || ||| | ||| | || ||||| |||||| Sbjct 16535910 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 16535969 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 || || |||||||| |||||||| || | | ||| |||| || ||||| | || || Sbjct 16535970 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACT 16536029 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || || | ||||||||| ||||| |||||||| ||||| || ||||||||| Sbjct 16536030 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 16536089 Query 170312 CACAACTTCCCTCTCGACCTCGCTGCTGCTGAG 170344 |||||||||||||| ||||| ||||||| |||| Sbjct 16536090 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 16536122 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 170280 TTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTCGCTGCTG 170339 |||| |||||||| ||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct 26298428 TTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTG 26298487 Query 170340 CTG 170342 || Sbjct 26298488 TTG 26298490 >seq18 Length=20869551 Score = 489 bits (542), Expect = 2e-133 Identities = 559/751 (74%), Gaps = 0/751 (0%) Strand=Plus/Minus Query 169594 GGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTCTT 169653 |||||| ||| | ||||||||| | ||||||||||||||| |||| |||| | Sbjct 2057535 GGAAGCTGCATCCGTTGATGAATGGCTACACAACGGTGGTCCTTATGAACTAATTGTTCT 2057476 Query 169654 CCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGTCT 169713 ||||| | | || | | ||| |||||||||||||||||| | | ||||| Sbjct 2057475 ACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 2057416 Query 169714 GGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGT 169773 ||||||||| |||||||| |||||| || || ||||| ||||| | || | ||||| Sbjct 2057415 GGGTATGCGTCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGTTGCGACTGCTGT 2057356 Query 169774 TTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTC 169833 |||| || |||| || |||| || || || ||||| | ||||||||| || ||||| Sbjct 2057355 TTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 2057296 Query 169834 GGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTT 169893 || || || |||| ||| | || ||||| |||||||||||||| || |||||||| || Sbjct 2057295 TGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATT 2057236 Query 169894 CCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAG 169953 |||||| | ||||| || || || || || || || || ||||| || ||||| ||| Sbjct 2057235 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTC 2057176 Query 169954 CCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGTTA 170013 | | || ||||| ||| | || | |||||||| || || || || || | ||||| Sbjct 2057175 CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 2057116 Query 170014 CAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGTCG 170073 || ||||| ||||||||||| || |||||||| || || ||||||||||| || || || Sbjct 2057115 CAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCG 2057056 Query 170074 CCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGC 170133 ||||||||||||| ||| |||||||| || ||||| | || |||||| | || || Sbjct 2057055 ATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGC 2056996 Query 170134 ATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCT 170193 ||||| || || || || ||||| || ||| | ||| | || ||||| |||||||| Sbjct 2056995 TTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCT 2056936 Query 170194 GAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTG 170253 || |||||||| |||||||| || | | ||| |||| || ||||| | || || || Sbjct 2056935 AAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTG 2056876 Query 170254 GGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCA 170313 ||| || || | ||||||||| ||||| |||||||| ||||| || ||||||||||| Sbjct 2056875 GGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 2056816 Query 170314 CAACTTCCCTCTCGACCTCGCTGCTGCTGAG 170344 |||||||||||| ||||| ||||||| |||| Sbjct 2056815 CAACTTCCCTCTAGACCTAGCTGCTGTTGAG 2056785 Score = 273 bits (302), Expect = 3e-68 Identities = 280/366 (77%), Gaps = 0/366 (0%) Strand=Plus/Minus Query 169979 GAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 170038 |||||||| || || || || || | ||||||| ||||| ||||||||||| || Sbjct 2056505 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 2056446 Query 170039 TACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 170098 |||||||| || || ||||||||||| || || || ||||||||||||| ||| ||| Sbjct 2056445 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 2056386 Query 170099 AACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTC 170158 ||||| || ||||| | || |||||| | || || ||||| || || || || ||||| Sbjct 2056385 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 2056326 Query 170159 ACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCC 170218 || ||| | ||| | || ||||| |||||||| || |||||||| |||||||| || Sbjct 2056325 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 2056266 Query 170219 ATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGT 170278 | | ||| |||| || ||||| | || || ||||| || || | ||||||||| Sbjct 2056265 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 2056206 Query 170279 CTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTCGCTGCT 170338 ||||| |||||||| ||||| || ||||||||||||||||||||||| ||||| |||||| Sbjct 2056205 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 2056146 Query 170339 GCTGAG 170344 | |||| Sbjct 2056145 GTTGAG 2056140 >seq4 Length=30110606 Score = 284 bits (314), Expect = 1e-71 Identities = 310/412 (75%), Gaps = 0/412 (0%) Strand=Plus/Minus Query 170968 GACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCA 171027 |||| || ||||||||||| || |||||||| || ||||| ||||| || ||||| | Sbjct 15118883 GACCTTATAATGCAATCGCATTATCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAA 15118824 Query 171028 TCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCT 171087 | ||||| || || || || |||||||||| || ||| ||||| || ||||| || | Sbjct 15118823 TTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATAT 15118764 Query 171088 TCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCATATGA 171147 | || ||| | ||||| | ||||| || || || |||||| |||| ||||||||||||| Sbjct 15118763 TTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGA 15118704 Query 171148 TGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAG 171207 |||| || || ||| | || |||| || |||| | || |||||||||| ||| |||| Sbjct 15118703 TGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAG 15118644 Query 171208 AGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTC 171267 | |||||||| | |||||||||| || ||||| || || || ||| || | |||| Sbjct 15118643 AAAATACTTTATTTGAAGATGGTAATGGTGCAAATACATTCTGTGCTTTTAACCCAACTC 15118584 Query 171268 AGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTA 171327 | | ||||| || ||||| |||||||| ||||| || || ||||| || || ||||| Sbjct 15118583 AAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGG 15118524 Query 171328 TCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGT 171379 | || || |||||| ||||||| |||||||||||| | ||||| || || Sbjct 15118523 TTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGTACCAGT 15118472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591922938914240