Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2067 87.8 1e-12 >seq2067 Length=80805 Score = 87.8 bits (96), Expect = 1e-12 Identities = 107/144 (74%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 20410 CCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATG 20469 ||||||| || | || ||| | || || || || ||| || || || ||||||||| Sbjct 11038 CCTCCATCTCTT---CTTTGC-AGTTCTATGTAGCCAATGGGGAGTTATCATGTCAAATG 10983 Query 20470 TATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTG 20529 ||||| ||||| ||||| ||||| ||||| || || || || |||||| |||||| || Sbjct 10982 TATCAGCGATCTGCTGACATGGGCCTGGGAGTGCCATTTAACATTGCATCTTATGCACTT 10923 Query 20530 CTTACGTATATGATTGCACATGTT 20553 || || | ||| |||| |||||| Sbjct 10922 CTAACATGCATGCTTGCTCATGTT 10899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399129949238950