Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq6058 87.8 2e-12 >seq6058 Length=18787 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| ||||||||||| || || || ||||||||| ||||| || ||||| ||||| || Sbjct 3094 ACAAGCAAAATCACAGTGGAGTCCTTCATCTCTAGATATAAGCTCATTTGAGAATGTCAA 3153 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA 13975 |||||||| ||||| | ||||| | ||| ||||||||| |||| Sbjct 3154 GCCTGGCATTAATCC-CTCTTTTTAAGCCAGAATATTGCA-CAAA 3196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479661377774000