Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq6058 91.5 1e-13 >seq6058 Length=18787 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/106 (81%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||| |||||||||||||| | ||||||||||||| ||| ||||| ||||| ||||| | Sbjct 3094 ACAAGCAAAATCACAGTGGAGTCCTTCATCTCTAGATATAAGCTCATTTGAGAATGTCAA 3153 Query 13210 ACCCGGCA-TAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAA 13254 || |||| ||| ||||| ||||||| ||| ||||| ||| |||| Sbjct 3154 GCCTGGCATTAATCCCTC--TTTTTAAGCCAGAATATTGCA-CAAA 3196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430924043636220