Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4666 168 1e-37 seq208 161 2e-35 seq52 154 2e-33 seq6829 147 3e-31 seq5208 147 3e-31 seq650 147 3e-31 seq5124 140 5e-29 seq1601 140 5e-29 seq9595 132 8e-27 seq2292 120 5e-23 >seq4666 Length=29251 Score = 168 bits (186), Expect = 1e-37 Identities = 194/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| ||| | || ||||||||||| ||||||||||| || ||| Sbjct 27647 GCAAAGAGGCATCGCAAGGTTCTCAGGGACAACATCCAAGGGATCACCAAGCCGGCGATC 27706 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| | |||||||| || |||||| || || | |||| || |||| Sbjct 27707 CGCCGTTTGGCCAGACGTGGTGGCGTTAAGCGTATCAGCGGTCTCATCTACGAGGAGACA 27766 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | |||||||| || ||| ||| |||| ||| || | ||| |||||| Sbjct 27767 CGTGGCGTACTCAAGATCTTTCTAGAGAACGTCATCCGTGACGCCGTTACCTACACCGAG 27826 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || ||||| |||||| ||||||| |||||||||| |||||| | |||||| Sbjct 27827 CACGCTCGCCGGAAGACCGTCACCGCCATGGACGTCGTCTATGCTTTGAAAAGACAAGGC 27886 Query 16673 CGTAAGATTTATGGTTTTGGA 16693 || | |||| ||||||||| Sbjct 27887 CGAACTCTTTACGGTTTTGGA 27907 Score = 150 bits (166), Expect = 3e-32 Identities = 190/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||| | | ||| | || |||||||| |||||||||||||| || ||| Sbjct 15186 GCCAAGAGGCATCGGAAAGTTCTCAGGGACAACATCCAGGGAATCACCAAGCCGGCGATC 15127 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| | ||||| || || |||||| || || | | || || |||| Sbjct 15126 CGCCGTTTGGCCAGACGTGGCGGCGTTAAGCGTATCAGCGGTCTCATTTACGAGGAGACC 15067 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| | |||||||| || ||| |||||||| ||| || || || || ||| Sbjct 15066 CGCGGTGTCCTCAAGATCTTTCTAGAGAACGTTATCCGTGACGCCGTCACTTACACTGAG 15007 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || |||||||| ||| ||||||| |||||||||| ||||| | ||||| Sbjct 15006 CACGCTCGCCGGAAGACTGTTACCGCCATGGACGTCGTCTATGCTTTGAAGAGACAAGGT 14947 Query 16673 CGTAAGATTTATGGTTTTGGA 16693 |||| | || ||||||||| Sbjct 14946 CGTACTCTATACGGTTTTGGA 14926 Score = 149 bits (164), Expect = 1e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| ||| | || |||||||| || ||||||||||| ||||| Sbjct 17125 GCCAAGAGGCATCGCAAGGTTCTCAGGGACAACATCCAGGGCATCACCAAGCCCGCTATT 17066 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| | ||||| || || |||||| || || | |||| || |||| Sbjct 17065 CGCCGTTTGGCCAGACGTGGCGGCGTTAAGCGTATCAGCGGTCTCATCTACGAGGAGACC 17006 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | |||||||| || ||| ||| |||| ||| || | || |||||| Sbjct 17005 CGTGGCGTACTCAAGATCTTTCTAGAGAACGTCATCCGTGACGCCGTTACTTACACCGAG 16946 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || |||||||| ||| ||||||| |||||||||| ||||| | |||||| Sbjct 16945 CACGCTCGCCGGAAGACTGTTACCGCCATGGACGTCGTCTATGCTTTGAAGAGACAAGGC 16886 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| |||| || || ||| | ||| Sbjct 16885 CGTACTCTTTACGGATTCGGAGGCTAA 16859 Score = 138 bits (152), Expect = 2e-28 Identities = 179/245 (73%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| | || || | || |||||||| || ||||||||||| || || Sbjct 12061 GCCAAGAGGCATCGCA-AGGTCCTCAGGGACAACATCCAGGGCATCACCAAGCCGGCGAT 12003 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||| | ||||| || || |||||| || || | |||| || |||| Sbjct 12002 TCGCCGTTTGGCCAGACGTGGCGGCGTTAAGCGTATCAGCGGTCTCATCTACGAGGAGAC 11943 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | |||||||| || ||| ||| |||| ||| || | || ||||| Sbjct 11942 CCGTGGCGTACTCAAGATCTTTCTAGAGAACGTCATCCGTGACGCCGTTACTTACACCGA 11883 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||| || ||||| ||||| ||||||| |||||||||| |||||| | ||||| Sbjct 11882 GCACGCTCGCCGGAAGACCGTCACTGCCATGGACGTCGTCTATGCTTTGAAAAGACAAGG 11823 Query 16672 CCGTA 16676 ||||| Sbjct 11822 CCGTA 11818 >seq208 Length=326926 Score = 161 bits (178), Expect = 2e-35 Identities = 196/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| | ||||| ||||||||||| || ||||| |||||||| || Sbjct 124319 GCGAAGAGGCATCGCAAAGTGCTTCGTGATAACATCCAGGGTATCACTAAGCCAGCAATT 124260 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||||| || ||||| || |||||| || ||| | |||| ||||||| Sbjct 124259 CGGCGATTGGCTCGACGAGGTGGTGTGAAGCGTATCAGTGGTCTTATCTACGAAGAGACC 124200 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | ||||||||| | ||| ||||| | ||||||| || || || ||| Sbjct 124199 CGTGGAGTTCTCAAGATCTTCTTGGAGAATGTTATTCGTGATGCTGTCACTTACACTGAG 124140 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||||| | |||||||| || ||||||| | || |||||| | || | |||||| Sbjct 124139 CACGCTAGGAGGAAGACTGTGACTGCCATGGACGTTGTTTATGCACTCAAGAGACAAGGC 124080 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || ||||||||| ||||| Sbjct 124079 AGGACTCTCTACGGTTTTGGAGGTTAA 124053 >seq52 Length=499638 Score = 154 bits (170), Expect = 2e-33 Identities = 198/273 (73%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| ||| | || |||||||| || ||||| ||||| || || Sbjct 375242 GCCAAGAGGCATCGCAAGGTTCTCAGGGACAACATCCAGGGCATCACTAAGCCGGCGATT 375301 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| | ||||| |||||||||||| || || | |||| || |||| | Sbjct 375302 CGCCGTTTGGCCAGACGTGGCGGAGTCAAGCGTATCAGCGGTCTCATCTACGAGGAGACT 375361 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| | |||||||| ||| ||| |||||||| ||| || | || || ||| Sbjct 375362 CGCGGTGTACTCAAGATCTTTCTCGAGAACGTTATCCGTGACGCCGTTACTTACACTGAG 375421 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || |||||||| ||| ||||||| |||||||||| |||||| | ||||| Sbjct 375422 CACGCTCGCCGGAAGACTGTTACCGCCATGGACGTCGTCTATGCTTTGAAAAGACAAGGT 375481 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 || | | || || || ||| | | ||||||| Sbjct 375482 CGAACTCTGTACGGATTCGGAGGCTGATCTTCT 375514 Score = 150 bits (166), Expect = 3e-32 Identities = 194/268 (72%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| ||| | || ||||| || |||||||||||||| || || Sbjct 372511 GCCAAGAGGCATCGCAAGGTTCTCAGGGACAACATACAGGGAATCACCAAGCCGGCGATT 372570 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| | ||||| ||||| |||||| || || | |||| || |||| | Sbjct 372571 CGCCGTTTGGCCAGACGTGGCGGAGTTAAGCGTATCAGCGGTCTCATCTACGAGGAGACT 372630 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| | |||||||| ||| ||| |||||||| ||| || | || || ||| Sbjct 372631 CGCGGTGTACTCAAGATCTTTCTCGAGAACGTTATCCGTGACGCCGTTACTTACACTGAG 372690 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || |||||||| ||| ||||||| |||||||||| |||||| | ||||| Sbjct 372691 CACGCTCGCCGGAAGACTGTTACCGCCATGGACGTCGTCTATGCTTTGAAAAGACAAGGA 372750 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | || || || ||| ||| || Sbjct 372751 CGAACTCTGTACGGATTCGGAGGTTGAT 372778 >seq6829 Length=15020 Score = 147 bits (162), Expect = 3e-31 Identities = 177/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||| | |||||||||||||| || || || ||| |||| | ||||| || || Sbjct 3259 GACAACATCTAGGGAATCACCAAGCCGGCGATTCGCCGTTTGGCCAGACGTGGCGGCGTT 3200 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | |||| || |||| ||| | ||| | |||||||| || || Sbjct 3199 AAGCGTATCAGCGGTCTCATCTACGAGGAGACTCGCGGTGTACTTAAGATCTTTCTTGAG 3140 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | |||||||| ||| || || || || ||||||||| || |||||||| ||| || Sbjct 3139 AACGTTATCCGTGACGCCCTCACTTACACTGAGCACGCTCGCCGGAAGACTGTTACCGCC 3080 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| |||||||||| ||||| | |||||||||| | || || || ||| ||| | Sbjct 3079 ATGGACGTCGTCTATGCTTTGAAGAGACAAGGCCGTACTCTGTACGGATTCGGAGGTTGA 3020 Query 16700 T 16700 | Sbjct 3019 T 3019 >seq5208 Length=24548 Score = 147 bits (162), Expect = 3e-31 Identities = 177/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||| | ||||||| ||| | || |||||||| || ||||||||||| || || || Sbjct 13341 AAGAGGCATCGCAAGGTTCTCAGGGACAACATCCAGGGCATCACCAAGCCCGCGATTCGC 13282 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||| |||| | ||||| ||||| |||||| || | | |||| || |||| ||| Sbjct 13281 CGTTTGGCCAGACGTGGCGGAGTTAAGCGTATCAGCAGTCTCATCTACGAGGAGACTCGC 13222 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| | |||||||| ||| ||| |||||||| ||| || | || || |||||| Sbjct 13221 GGTGTACTCAAGATCTTTCTCGAGAACGTTATCCGTGACGCCGTTACTTACACTGAGCAC 13162 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 ||| || ||||| |||||| ||||||| |||||||||| ||||| | ||||||||| Sbjct 13161 GCTCGGCGGAAGACCGTCACCACCATGGACGTCGTCTATGCTTTGAAGAGACAAGGCCGT 13102 Query 16676 A 16676 | Sbjct 13101 A 13101 >seq650 Length=196497 Score = 147 bits (162), Expect = 3e-31 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 |||||||| |||||||||||||| || || || ||| |||| | ||||| || || ||| Sbjct 170467 AACATCCAGGGAATCACCAAGCCGGCGATTCGCCGTTTGGCCAGACGTGGCGGCGTTAAG 170408 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 ||| || || | |||| || |||| ||| | ||| | |||||||| || ||| | Sbjct 170407 CGTATCAGCGGTCTCATCTACGAGGAGACTCGCGGTGTACTCAAGATCTTTCTTGAGAAC 170348 Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642 ||||||| ||| || || || || ||||||||| || |||||||| ||| ||||| Sbjct 170347 GTTATCCGTGACGCCGTCACTTACACTGAGCACGCTCGCCGGAAGACTGTTACCGCCATG 170288 Query 16643 GATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 || |||||||||| ||||| | |||||||||| Sbjct 170287 GACGTCGTCTATGCTTTGAAGAGACAAGGCCGTA 170254 >seq5124 Length=25185 Score = 140 bits (154), Expect = 5e-29 Identities = 194/271 (72%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| ||| | || |||||||| || ||||||||||| || || Sbjct 2175 GCCAAGAGGCATCGCAAGGTTCTCAGGGACAACATCCAGGGCATCACCAAGCCCGCGATT 2116 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| | ||||| ||||| |||||| || || |||| || |||| | Sbjct 2115 CGCCGTTTGGCCAGACGTGGCGGAGTTAAGCGTATCAGCGGTCCCATCTACGAGGAGACT 2056 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| | |||||||| ||| ||| |||||||| ||| || | || || ||| Sbjct 2055 CGCGGTGTACTCAAGATCTTTCTCGAGAACGTTATCCGTGACGCCGTTACTTACACTGAG 1996 Query 16613 CACGCTAAACGTAAGA---CTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 |||||| || |||| | |||||| ||||||| |||||||||| ||||| | ||| Sbjct 1995 CACGCTCGGCGGAAGACCGCCGTCACCGCCATGGACGTCGTCTATGCTTTGAAGAGACAA 1936 Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 ||||||| | || || || ||| ||| || Sbjct 1935 GGCCGTACTCTATACGGATTCGGAGGTTGAT 1905 >seq1601 Length=101971 Score = 140 bits (154), Expect = 5e-29 Identities = 176/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| |||||| || || ||||| || ||||||||||| || || Sbjct 50667 GCCAAGAGGCATCGCAAGGTTCTTCGGGACAATATCCAGGGCATCACCAAGCCCGCCATT 50726 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||| | ||||| || || |||||| || || | |||| || |||| Sbjct 50727 CGCCGTTTGGCCAGGCGTGGCGGCGTTAAGCGTATCAGCGGTCTCATCTACGAGGAGACC 50786 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | |||||||| || ||| ||| |||| ||| || || || || ||| Sbjct 50787 CGTGGCGTACTCAAGATCTTTCTAGAGAACGTCATCCGTGACGCCGTCACTTACACTGAG 50846 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || |||||||| ||| ||||||| |||||||||| |||||| | ||||| Sbjct 50847 CACGCTCGCCGGAAGACTGTTACCGCCATGGACGTCGTCTATGCTTTGAAAAGACAAGGA 50906 Query 16673 CG 16674 || Sbjct 50907 CG 50908 >seq9595 Length=5652 Score = 132 bits (146), Expect = 8e-27 Identities = 161/217 (74%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||| |||||||||||||| || || || ||| |||| | ||||| || || Sbjct 1919 GACAACATCT--GGAATCACCAAGCCGGCGATTCGCCGTTTGGCCAGACGTGGCGGCGTT 1862 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | |||| || |||| ||| | ||| | |||||||| || || Sbjct 1861 AAGCGTATCAGCGGTCTCATCTACGAGGAGACTCGCGGTGTACTTAAGATCTTTCT-GAG 1803 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | |||||||| ||| || || || || ||||||||| || |||||||| ||| || Sbjct 1802 AACGTTATCCGTGACGCCCTCACTTACACTGAGCACGCTCGCCGGAAGACTGTTACCGCC 1743 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 ||||| |||||||||| ||||| | |||||||||| Sbjct 1742 ATGGACGTCGTCTATGCTTTGAAGAGACAAGGCCGTA 1706 >seq2292 Length=72099 Score = 120 bits (132), Expect = 5e-23 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||| |||||||| ||||| || || || | || |||||| | || || || Sbjct 54893 GATAACATCCAGGGAATCACTAAGCCTGCCATTCGAAGACTCGCTCGTAGGGGAGGTGTG 54952 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || ||| | ||||||| || | | | || | ||||||||| | | Sbjct 54953 AAGCGTATCAGTGGCCTTATCTATGAGGAAACCAGAGGAGTCCTCAAGATCTTCTTGGAA 55012 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||||| | ||| ||| | || || ||||||||| | ||||| |||||| || Sbjct 55013 AATGTTATTCGTGACGCTGTTACTTACACAGAGCACGCTCGGAGGAAGACGGTCACCGCC 55072 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| |||| ||||| ||||| | ||||| || | |||| |||||||| ||||| Sbjct 55073 ATGGACGTCGTTTATGCTTTGAAGAGGCAAGGTCGCACCCTTTACGGTTTTGGTGGTTAA 55132 Query 16700 T 16700 | Sbjct 55133 T 55133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79065042049230