Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq6058 93.3 4e-14 >seq6058 Length=18787 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 21451 ATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACT 21510 |||||| |||| || ||| | ||| ||||||||||| || | |||||||| ||| Sbjct 3070 ATACAAAAATTACCTATACAGAAGACAAGCAAAATCACAGTGGAGTCCTTCATCTCTAGA 3129 Query 21511 TATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATAT 21570 ||| | ||||| || ||||| || || ||||||||||| |||||||| | ||| ||||| Sbjct 3130 TATAAGCTCATTTGAGAATGTCAAGCCTGGCATTAATCC-CTCTTTTTAAGCCAGAATAT 3188 Query 21571 TGACGCAAATGCT 21583 || | |||| ||| Sbjct 3189 TG-CACAAAAGCT 3200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531826932276400