Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2067 98.7 3e-15 >seq2067 Length=80805 Score = 98.7 bits (108), Expect = 3e-15 Identities = 113/150 (75%), Gaps = 4/150 (3%) Strand=Plus/Minus Query 111675 GCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGC 111734 |||| ||| |||| || |||| ||| |||| |||||| | | ||| | | ||||| Sbjct 11044 GCACATCCTCCATCTCTTCTT---TGC-AGTTCTATGTAGCCAATGGGGAGTTATCATGT 10989 Query 111735 CAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTAC 111794 ||||||||||||||||||||||| || || || || || || ||||| |||||| ||| Sbjct 10988 CAAATGTATCAGCGATCTGCTGACATGGGCCTGGGAGTGCCATTTAACATTGCATCTTAT 10929 Query 111795 GCACTACTTACTTGCTTAATCGCTCATTTT 111824 ||||| || || ||| | | |||||| || Sbjct 10928 GCACTTCTAACATGCATGCTTGCTCATGTT 10899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303168071688020