Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3427 96.9 3e-15 >seq3427 Length=45480 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| || || || || ||||| ||||||||| | || || | Sbjct 42506 ATGCAAATATTTGTGAAGACCCTTACAGGAAAGACCATTACCTT-GAGGTAGAAAGCTCG 42448 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| |||| ||||| |||||| || || ||||| |||| || || Sbjct 42447 GATACAATTG-ACAATGTAAAGGCGAAAATTCAAGACAAGGAAGGAATCCCACCAGACCA 42389 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||||||||| | ||| || || ||||| ||||||| || || | || ||||| || Sbjct 42388 GCAAAGACTTATCTTTGCCGGTAAGCAATTGGAAGATGGCAGGACTTTAGCTGATTACAA 42329 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||| ||||| ||||| || | ||| ||||| || Sbjct 42328 CATCCAAAAGGAGTCGACCCTTCATTTGGTGCTG 42295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425286407093200