Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2658 313 2e-79 seq554 205 7e-47 seq1612 152 4e-31 seq489 134 1e-25 seq1670 109 4e-18 seq10347 107 1e-17 seq711 93.3 3e-13 seq9358 91.5 1e-12 >seq2658 Length=61179 Score = 313 bits (346), Expect = 2e-79 Identities = 974/1485 (66%), Gaps = 36/1485 (2%) Strand=Plus/Minus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || ||||| || || || || || | ||| || || | || |||||| || |||||| Sbjct 56766 ACGTTAAGGATTCCGTTAGCGTCTATATCGAAAACAACGTTAACTTGAGGCACACCTCTC 56707 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 | || || ||||| || || | ||| |||| || || || ||| | || | Sbjct 56706 GGCGCCGGAGGGATTCCGGTCAGTTCGAATTTTCCGAGCAGGTTGTTGTCTCTGGTTCTT 56647 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 |||||| || ||| ||| |||||| ||| ||| |||||||| |||||||||| Sbjct 56646 GCTCGTTCTCCTTCGTAAACTTGGATCAAAACACCAGGCTGATTATCCGAATAAGTTGAG 56587 Query 517445 AATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 || | |||| || | | ||||| ||||||||||| ||| | |||||||| Sbjct 56586 AAAA-TCTGCTCCTTCTTCGTCGGAATCGTTGTGTTTCTCGGAATTAGTACGGTCATAAC 56528 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||| || || |||||||| || ||| |||||||| ||||| | ||||| || || ||| Sbjct 56527 ACCGCCGGCAGTTTCTAATCCGAGACTTAGAGGAGTCACATCCAGTAGGAGAAGATCTTG 56468 Query 517564 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 || |||||| | || || | ||| || || |||| || || || || || || Sbjct 56467 AACTTTTTCGTTTCCTTCTCCGCTTAAAATCGCCGCCTGAACCGCTGCCCCGTAAGCCAC 56408 Query 517624 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAA 517682 ||||| || || || | | ||| | || | ||| || ||||| || | ||| || || Sbjct 56407 CGCTTCGTCTGGGTTTATACTTTTACAGAGCTCTTTTCCGTTGAACAAGTCTTGTAA-AA 56349 Query 517683 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742 ||||| || || || || | | ||||| || ||||| || | || || | ||| Sbjct 56348 GTTGTTGAACTTTCGGGATTCTTGTAGATCCACCGACTAAAACCACCTCGTGGATCTGAC 56289 Query 517743 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC-CCGCTCTAAAC 517801 || || | ||| | ||| |||| ||| || || || || | || | || ||||| Sbjct 56288 TCTTGTCAATTTTAGCATCGCGTAAACATTTCTCCACTGGCTCCATACATCTCT-TAAAC 56230 Query 517802 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 517861 || || | | |||||||||| | ||||| || | ||| | | |||| |||||| Sbjct 56229 AAATCCATATTCAATTCTTCGAATCTCGCTCTGGTTATTGTGGCGTAGAAATCGATTCCT 56170 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 ||| | |||||||| | |||||| || |||||||| | ||| || | | || || || Sbjct 56169 TCGTATAAAGAATCGATTTCAATTGTCGTTTGAGTTGTAGACGACAACGTTCGCTTCGCT 56110 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTT 517979 | || || || || || | || | | | | | || ||| | | ||| | | Sbjct 56109 CTCTCGCAAGCGGTTCTCAATCGCCTCAGTGATCTCGC--GTTGCCGCTAATATCCTTCT 56052 Query 517980 TATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAAAATCTTCA 518038 ||| |||||| | || || ||| | | || | || | | ||||| ||||||||| Sbjct 56051 TATTCTTTCTCCTAAATTCAGAAACGAAATGAT-TAACCATTCTGTTATCGAAATCTTCA 55993 Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 518098 ||||| | | ||||| ||| | |||||| | |||| ||| | ||| ||||| | | Sbjct 55992 CCTCCGAGATGAGTATCTCCGGCTGTAGCTTTAACTTCGAAGATTCCTTCTTCGATCGTT 55933 Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT--CTT 518156 |||| | |||||| |||||||| || | ||| ||||| || || ||| || | | Sbjct 55932 AAAATTGAGACATCAAAAGTTCCACCGCCGAGATCGAAAATCAGAACGTTCTGTTCGCCT 55873 Query 518157 TGTCTTG----GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 518212 ||| | || ||||| | || ||||||| ||| || || || || ||||| || Sbjct 55872 ACTCTCGAAGCTTTCTTATCCAATCCGTACGCAATAGCCGCGGCGGTCGGCTCATTGATG 55813 Query 518213 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 518272 || ||||| || || | || | ||| ||| ||||| || || ||||| | ||| ||| Sbjct 55812 ATCCTCAACACGTTCAATCCCGAAATCGCTCCAGCATCCTTCGTCGCTTGCCGTTGCGAA 55753 Query 518273 TCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCG 518332 ||||| ||||| || || ||||| | ||||| | | || | ||| | | |||| Sbjct 55752 TCGTTGAAATACGCTGGTACAGTTACGACGGCGTTTTTGACGGAGTGACCGAGAAAAGCT 55693 Query 518333 CTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGC 518392 | || | |||| ||| | || | ||| |||||||| | |||| ||| ||||| Sbjct 55692 TCAGAGACTTCTCTCATCTTAATCAACACCATGGATGAAATCTCCTCTGCTGAAAATTGC 55633 Query 518393 TTGGATTCATTTTGATATGATACTTCA-AAATAT----GGTTTATTACC---AACATTAA 518444 || || || | | || || |||| || ||| || |||| || | | Sbjct 55632 TT---CTC-TTCTCCTTTG-TAGTTCACAATTATCATAGGCTTATCGCCTTGTCCCGGGA 55578 Query 518445 TAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATC-TCTA 518503 | || ||||| |||||| |||||||| ||||| | ||| | |||| | Sbjct 55577 TCACCTTAAACGGCCAGAGCTTCATATCGCTCTGAACCGACGGATCA-GAGAATCGACGG 55519 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 || || | || || ||||| || | ||||| ||||| || || | || | || Sbjct 55518 CCGATCAGACGCTTAGCATCGAAGACCGTATTCTGAGGATTCATCGCCACCTGGTTCTTC 55459 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||| || || | | ||||| || || || | || || || ||||| || || Sbjct 55458 GCCGCATCGCCGATTAATCGCTCTGTGTCAGTGAAGGCCACGTAGGAAGGAGTCGTACGG 55399 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || |||||||| || || || ||||||||| | | || ||||||| || || || || Sbjct 55398 TTGCCTTGATCGTTGGCGATTATTTCAACTCGATCGTTGAGCCATACTCCAACGCAGCTG 55339 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGCAATTTTATCTGACATT 518728 | || || || | |||||| || || || |||||| ||| || Sbjct 55338 TATGTAGTGCCAAGATCAATTCCTATGGC---TTTATCAGACTTT 55297 >seq554 Length=213530 Score = 205 bits (226), Expect = 7e-47 Identities = 600/905 (66%), Gaps = 22/905 (2%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||| | |||| ||||||||||||||||| ||||||| ||| || ||| | ||| Sbjct 121059 TTATCCTCAGCAGAAACATTAAGAATACCATTAGCATCCATATCGAAACAGACATTGATT 121118 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| || ||||| ||||||| || || || | | | ||| | || ||| || Sbjct 121119 TGAGGAACACCTCTTGGAGCAGGAGGAATGCCATGTAGCTCAAACTTGCCAAGAAGGTTG 121178 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || ||||| | | || |||||| || | | || | |||| || ||| ||| Sbjct 121179 TTGTCTTTGCTTCTGTCTCTTTCACCTTCATGGACATAAATCGAAACTCCAAGTTGGTTA 121238 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT- 517488 || || |||| || || | | | | | | ||||| |||| ||||||| ||| Sbjct 121239 TCAAAACAAGTGGTGAAAATTTTCTCTCTCATGGTTGGAATCGTTGAGTTTCTAGGAATC 121298 Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 517548 || | | | | | | ||| | | |||| | | || || ||||| |||||||| | Sbjct 121299 AAGACT-GCCGTTACTCCAACAGTTGTTCCCATTCCGAGGCTGAGAGGTGTGACATCGAG 121357 Query 517549 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 517608 || | | | ||||| ||| |||| || |||| ||||||||| ||||||| || Sbjct 121358 GAGAAGCAAGTCTTGAACTTTCTCATTCCCTTCACCACTAAGAATAGCAGCTTGAACTGC 121417 Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 ||| ||||| |||||||| ||||| || || | ||| |||| || || ||||| Sbjct 121418 AGC-CCATAAGCAACAGCCTCATCTGGGTTTATGCTTTTGCAAAGTTCCTTGCCGTTGAA 121476 Query 517669 AAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 |||| ||| || |||||| || || ||||| | | || || ||||| | || | Sbjct 121477 GAAATCTTGTAA-AAGTTGCTCAACTTTGGGAATCCTTGTCGACCCACCAACAAGAACTA 121535 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC-TTTTTCAACGGGTTCA 517786 |||| || || | || || | ||| || | || | |||| ||| ||||| | || Sbjct 121536 CCTCATCAACATGAGTCTTCTCAATTTTAGAGT-CACTCAAACATTTCTCAACAGTTTTT 121594 Query 517787 AGACCCGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 517844 | || |||||||||||| || ||| ||||| || | |||||||||| ||| | Sbjct 121595 ATACATTGTCTAAACAAGTCCATGTTCAA--CTCTTCAAACCTTGCTCTAGTAATAGT-A 121651 Query 517845 CATTA-TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGA---GTCGAA 517900 | || |||||| |||| | | | || |||||||| || | |||||| |||||| Sbjct 121652 GAGTAGAAATCAACACCTTGGTAAAGTGAGTCAACTTCGATTTTGGTTTGAGTGGTCGAA 121711 Query 517901 G-AAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC 517959 | |||| || | || || | |||||||| | || | |||| || ||| | || Sbjct 121712 GAAAGAAAGAATCCTCTTTGCTCTCTCACATGCCATTCTCAACCTTCTCAAAGCTCTAGC 121771 Query 517960 TGATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA 518017 |||| | | | |||| | || | ||||| || || ||| | ||| | | ||| Sbjct 121772 --ATTGCCACTAACATCTTTCTTGTGCTTTCTATTAAACTCTGCCACAAAGTGATTCACA 121829 Query 518018 AGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGG 518077 || | ||||||||||||||||| || | | ||||| ||| ||||| | ||||| Sbjct 121830 AGCCTGTTATCAAAATCTTCACC-CCAAGATGAGTATCTCCAACAGTAGCCTTAACTTGA 121888 Query 518078 AAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAA 518137 || | ||||||||| | | ||||| |||||| || |||||||| | ||| ||| Sbjct 121889 AAGATATCATCTTCAATTGTGAGAAGAGAAACATCAAATGTGCCACCACCAAGATCGAAA 121948 Query 518138 ATAAG 518142 || || Sbjct 121949 ATCAG 121953 Score = 105 bits (116), Expect = 5e-17 Identities = 155/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 518496 AATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCT 518554 ||||| || ||||| || | || |||||||| | || || || || || ||| || Sbjct 122228 AATCTTCTCCCAATCAACCTCTTGGCATCAAAGACTGTGTTTTGAGGGTTCATAGCAACT 122287 Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614 || | ||||| ||||| || || | | ||||| || || || | ||||||||| ||| Sbjct 122288 TGGTTCTTGGCCGCATCACCGATTAACCGCTCTGTATCAGTGAAAGCAACATATGAAGGA 122347 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674 || || || ||||||||||| || || || || ||||| | | |||||||| || || Sbjct 122348 GTGGTTCGGTTACCTTGATCGTTGGCTATGATCTCAACGTGGTCGTTTTGCCACACGCCA 122407 Query 518675 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || || || | || || || || || |||||||| || Sbjct 122408 ACGCAGCTGTATGTGGTCCCCAAGTCGATACCAATTGC 122445 >seq1612 Length=101449 Score = 152 bits (168), Expect = 4e-31 Identities = 553/853 (65%), Gaps = 23/853 (3%) Strand=Plus/Minus Query 517466 GGAATTGTTGTGTTTCT---ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAA 517522 ||||| ||||||||||| ||||| | | ||||||| ||| || || || || ||| Sbjct 19788 GGAATGGTTGTGTTTCTGGGATCAAAACT----GTCATAACACCTCCAGCAGTCTCCAAA 19733 Query 517523 CCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGA 517582 |||||||| | |||||| ||||| | || | || | |||| || |||| || | Sbjct 19732 CCAAGAGACAAAGGAGTAACATCCAAAAGCAAAAGGTCCTGAACCTTCTCATTTCCTTCA 19673 Query 517583 CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACA 517642 || | ||||| || || | |||||||||||| |||||||| || || || |||| | Sbjct 19672 CCGCTTAAGATAGCAGCCTGGACAGCAGCACCATAAGCAACAGCCTCGTCTGGGTTAATA 19613 Query 517643 GTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAAT 517701 | | || | || |||||||| |||| ||| || || |||| ||||| ||||| Sbjct 19612 CTCTTGCAGAGCTCCTTTCCATTGAAGAAATCTTGCAACAA-TTGTTGCACCTTGGGAAT 19554 Query 517702 ACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAAT 517760 | || || || || || | || | ||||| || |||| | || |||| || | | Sbjct 19553 TCTAGTAGAACCACCGACAAGCACTACATCATGAAC-TGTGCTCTTGTCCATCTTAGCGT 19495 Query 517761 CCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTT 517820 || ||| || ||||| || || | || | || || | || ||| || | Sbjct 19494 CCCTCAAACACTTCTCAACTGGCTCCATACACTTCCTGAAGAGATCCATGTTAAGCTCCT 19435 Query 517821 CGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTT 517880 | ||| | || | |||| ||| | ||||||| || ||| | | ||| || | | Sbjct 19434 CAAATCTGGCACGGGTAATGGTGGAGTAGAAATCAATACCCTCGTATAGAGAGTCGATCT 19375 Query 517881 CAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTA 517940 | || || || || | | ||||| || | | || || | ||||| | ||| || | Sbjct 19374 CGATGGTGGTCTGGGCAGTGGAAGAGAGGGTCCTCTTCGCTCTCTCACAAGATGTTCTCA 19315 Query 517941 GTCTTCGTAAGGCTTTTGC-TGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCT 517999 || | | |||| ||| | | | | | || | || | || ||||| || || Sbjct 19314 ACCTCCTAAGGGCTCTTGGGTTACCGCTG-ATGTCCTTCTTGTTCTTCCTCTTAAACTCC 19256 Query 518000 TCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTC 518057 | || | ||| | || | | || ||||||||||| || || | | || | | Sbjct 19255 TGGACGAA--ATGGTTGACCATTCTGTTGTCAAAATCTTCTCCACCGAGATGGGTGTCAC 19198 Query 518058 CTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGG 518117 | | || ||| | || | || | || ||||||| | | || | |||||| | Sbjct 19197 CAGCGGTGGCTTTCACCTCAAAGATACCCTCTTCAATGGTAAGGAGGGACACATCAAAAG 19138 Query 518118 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT----TGG--TTTTTAT 518171 | ||||| |||| |||||| || | |||||| | || | ||| || || | Sbjct 19137 TACCACCTCCCAAATCAAAGATCAAAACATTCTTCTCACCAACGCTGGTGGCCTTCTTGT 19078 Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231 |||||||||| |||| || |||||||| || || || ||||| | || || || | || Sbjct 19077 CAAGACCATAAGCAATGGCGGCAGCAGTGGGCTCGTTGATAATACGCATCACGTTCAAAC 19018 Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291 ||||||| ||| ||||| || || || || | || |||||||| || |||||||| | Sbjct 19017 CAGCAATAACTCCGGCATCCTTGGTAGCCTGACGCTGAGAATCGTTGAAGTATGCAGGGA 18958 Query 518292 CAGTAATAACGGC 518304 |||| | |||||| Sbjct 18957 CAGTGACAACGGC 18945 >seq489 Length=226806 Score = 134 bits (148), Expect = 1e-25 Identities = 457/698 (65%), Gaps = 27/698 (4%) Strand=Plus/Plus Query 517601 TGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTA 517660 |||| ||||||||||| || ||||| ||||||||||||||| | ||| ||| ||| Sbjct 124614 TGAACTGCAGCACCATAGGCCACAGCCTCATCAGGATTAACACCCTTGTTTGGTTCTTTC 124673 Query 517661 CCATTGAAAAAATT--TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAA 517718 |||| ||| |||| | || || |||| ||||||||||| | || ||||||| Sbjct 124674 CCATC-AAAGAATTCCTTCAACAA-TTGTTGAACCTTAGGAATTCTAGTACTCCCTCCAA 124731 Query 517719 CTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC-TTTTTCA 517777 | | ||||| ||||| | | | ||| | || || ||| |||| | ||||||| Sbjct 124732 CAAGCACAATCTCATGAATATCAGTTTTCTTAAGGCCTGCATCTTTTAAAGCCTTTTTCA 124791 Query 517778 ACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 517837 || || | || |||||| || | |||||| || ||| |||| || || Sbjct 124792 CTGGCCCCATTGTCTTCT-TAAACAGATCCATATTAAGTTCCTCAAATCTAGCCCTTGTT 124850 Query 517838 AGAG----TGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 517893 | | ||| | ||||||| || ||||| | || || | ||| | | | ||| Sbjct 124851 AATGGCTCTGAGA----AATCAATACCATCGAAAAGGGATTCGATTTCGAGCCTCACTTG 124906 Query 517894 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 517953 | | | | || | ||||| | ||||||| || | || ||| ||| ||| Sbjct 124907 GTGCTGATTACTCAAAGCTCTCTTAGCTCTTTCACATTCTTTTCTAAGT-TTCCCAAGAG 124965 Query 517954 TTTTGCTGAT-TGATTCAAATCTGTTTTATATTTTCTCTTGA--AATCTTCAACACACCA 518010 |||||| | | | | | ||| | ||||| ||| |||||| ||| || | | | Sbjct 124966 CCTTGCTGTTGTTACTTATGTCTTTGTTATACTTTTTCTTGATCAAT-TTGATGAAA--- 125021 Query 518011 TGTTACAAGACGATT--ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 518068 | | || ||| | |||||||||||| || || | | |||| ||| ||||| Sbjct 125022 TAGTCCATGACTCTGTGATCAAAATCTTCTCCACCAAGATGTGTATCTCCACTTGTAGCC 125081 Query 518069 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCC 518128 |||| || | |||| |||| | ||| | | | |||||| || |||||||| Sbjct 125082 AAAACTTCAAAGACACCATTATCAATGGTCAAGATACTGACATCAAAAGTACCACCACCA 125141 Query 518129 ATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAA 518188 | |||||| | | | |||| |||| || || ||||| | |||||| |||||| Sbjct 125142 AGATCAAACACCAAAATATTC---TCTTCTCCTCCTTTCTTATCTAAACCATAGGCAAAA 125198 Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 || |||||||| || || || || ||||| ||||| || ||||| || | |||||| Sbjct 125199 GCTGCAGCAGTGGGCTCGTTGATTATTCTAGCCACATTGAGCCCAGCTATGGTGCCTGCA 125258 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 || || || |||||||| || | ||| || |||||||| Sbjct 125259 TCCTTTGTTGCTTGTCTCTGAGCATCATTGAAATATGC 125296 >seq1670 Length=98371 Score = 109 bits (120), Expect = 4e-18 Identities = 252/375 (67%), Gaps = 11/375 (3%) Strand=Plus/Plus Query 175612 AATTGATACTATTGTGCATTTTGCTGCTCATTCTCATGTCGATAATTCCTTTAAAAATTC 175671 ||||||||| || ||||||| || ||||| | ||||| || ||||||||| ||| Sbjct 52956 AATTGATACAATAATGCATTTCGCAGCTCAGACCCATGTTGACAATTCCTTTGGAAACAG 53015 Query 175672 TCTTGCTTTTACTGAAACAAATGTTTTTGGAACCCATGTTTTACTAGAATGTTCTCGAAT 175731 | ||| |||||| ||| || | | ||| || ||||| | ||||| || || Sbjct 53016 TTTTGAATTTACTAAAAACAACATATATGGTACTCATGTCCTCTTAGAAGC--CTGCAAA 53073 Query 175732 GTA--TGGCAAACTAAAACTATTTTTCCATATGAGTACTGATGAAGTTTATGGTGAAATC 175789 || ||| || | | | || ||||| |||| || |||||||| || ||||||| Sbjct 53074 GTCACTGGTCAAATCAGAAGGTTCATCCATGTGAGCACAGATGAAGTGTACGGTGAAACA 53133 Query 175790 GAT-ACTACG-----GATACTAGTCGTGAAGTTTCTTTATTGTGTCCTACAAATCCTTAT 175843 || | ||| ||| | || ||| | ||| | || |||||||| ||| Sbjct 53134 GAAGAAGACGCTGTTGATGGAAATCATGAGGCTTCCCAGCTCCTCCCCACAAATCCATAT 53193 Query 175844 GCTGCAACAAAAGCTGGTGCAGAACACATCGTGAAATCATATTTTTTATCATATAAATTA 175903 |||| ||||||||||| |||||| | || | ||||| ||| ||| |||| Sbjct 53194 TCTGCTACAAAAGCTGGGGCAGAAATGCTTGTTATGGCATATGGGCGATCGTATGGATTA 53253 Query 175904 CCTATTATTATTGCTCGATGTAATAATGTCTATGGTCGTAATCAATATCCTGAAAAACTT 175963 ||| | || | || || | |||||||| ||||| | |||||||| ||| ||||| || Sbjct 53254 CCTGTAATAACAACTAGAGGAAATAATGTGTATGGGCCTAATCAAT-TCCCGAAAAGCTC 53312 Query 175964 ATTCCTAAATTTATT 175978 ||||| ||||| ||| Sbjct 53313 ATTCCAAAATTCATT 53327 >seq10347 Length=3412 Score = 107 bits (118), Expect = 1e-17 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| || | || |||||||| | || || || || || ||| |||| | || Sbjct 7 CCAATCAACCTCTTGGCATCAAAGACTGTGTTTTGAGGGTTCATAGCAACTTGGTTCTTC 66 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||| || || | | ||||| || ||||| | |||||| || || ||||| | Sbjct 67 GCCGCATCACCGATTAACCGCTCTGTATCAGTAAAAGCAACATAGGAAGGTGTTGTTCTG 126 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 |||||||||||||| || || || ||||| | |||||||| ||||| || ||||| Sbjct 127 TTACCTTGATCATTGGCTATGATCTCAACACGGTCGTTTTGCCACACACCAACGCAACTG 186 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGC 518712 | ||||| || || || |||||||| || Sbjct 187 TATGTTGTGCCCAAGTCGATACCAATTGC 215 >seq711 Length=187166 Score = 93.3 bits (102), Expect = 3e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 |||| || |||| | || || || || || | |||||||||||| ||||| || |||| Sbjct 166725 CATCACCGATCAAGCGCTCGGTATCAGTGAAAGCAACATATGATGGTGTTGTTCGGTTAC 166784 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 | |||||||| ||||| || ||||| ||| | |||||||| || || || ||| Sbjct 166785 CCTGATCATTGGCAATGATCTCAACACGACCTTCCTGCCATACTCCGACGCAGGAGTAAG 166844 Query 518688 TTGTTCCTAAATCAATACCAATAGCA 518713 | || || ||||| || ||||||||| Sbjct 166845 TGGTACCCAAATCGATTCCAATAGCA 166870 >seq9358 Length=6319 Score = 91.5 bits (100), Expect = 1e-12 Identities = 133/187 (71%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 518496 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555 ||||| ||||| || | | | |||||||| | || || || || || ||| ||| Sbjct 5682 AATCTTGCCCAATCAACC-TCTCGCATCAAAGACTGTGTTTTGAGGGTTCATAGCAACTT 5624 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 518615 | | || || ||||| || || | || |||| || ||||| | |||||| || || | Sbjct 5623 GGTTCTTCGCCGCATCACCGATTAACTGCCCTGTATCAGTAAAAGCAACATAAGAAGGTG 5564 Query 518616 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 518675 |||| || ||||||||||| || || || || ||||| | |||||||| ||||| | Sbjct 5563 TTGTCCGGTTACCTTGATCGTTGGCTATGATCTCAACGCGGTCGTTTTGCCACACACCAA 5504 Query 518676 CACAACT 518682 ||||||| Sbjct 5503 CACAACT 5497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780271085203660