Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2658 170 2e-36 seq554 141 7e-28 seq1612 140 3e-27 seq9358 134 1e-25 seq3427 134 1e-25 seq489 123 2e-22 seq10347 122 7e-22 seq711 107 2e-17 seq2770 96.9 3e-14 seq1285 95.1 1e-13 seq5124 89.7 4e-12 >seq2658 Length=61179 Score = 170 bits (188), Expect = 2e-36 Identities = 560/856 (65%), Gaps = 16/856 (2%) Strand=Plus/Plus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| ||| || | || || | ||||||| || |||| || |||||| Sbjct 55910 GGAACTTTTGATGTCTCAATTTTAACGATCGAAGAAGGAATCTTCGAAGTTAAAGCTACA 55969 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| ||||||| || || |||||||| ||||| ||| |||| ||||| | | Sbjct 55970 GCCGGAGATACTCATCTCGGAGGTGAAGATTTCGATAACAGAATGGTTAATCAT--TTCG 56027 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCT-ATCTACATCTGCCAAAGCTCTTCGT 551903 || || |||| |||| || || ||| | | | || | || | | | || | Sbjct 56028 TTTCTGAATTTAGGAGAAAGAATAAGAAGGATATTAGCGGCAAC-GCGAGATCACTGAGG 56086 Query 551904 CGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACT 551963 || | ||||| |||||||| ||||| || ||| | | || ||| |||||||| || Sbjct 56087 CGATTGAGAACCGCTTGCGAGAGAGCGAAGCGAACGTTGTCGTCTACAACTCAAACGACA 56146 Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCT--ATTTCGAGGGCCA 552021 |||||| | ||||| |||| || ||||| |||| |||||| || | || || | Sbjct 56147 ATTGAAATCGATTCTTTATACGAAGGAATCGATTTC--TACGCCACAATAACCAGAGCGA 56204 Query 552022 AATTTGAAGATATTTGTTCTG-ATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT 552080 ||| ||||| ||| | || || | |||| | | || || ||||| || || | Sbjct 56205 GATTCGAAGA-ATTGAATATGGATTTGTTTAAGAGATGTATGGAGCCAGTGGAGAAATGT 56263 Query 552081 TTAAGAGATTCAAAGATTGATAA-ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATC 552139 ||| | ||| | || ||||| || | || | | || || | || | || |||||||| Sbjct 56264 TTACGCGATGCTAAAATTGACAAGAGTCAGA-TCCACGAGGTGGTTTTAGTCGGTGGATC 56322 Query 552140 TACAAGAATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAA 552198 ||||||||| || ||| ||| || | ||| | ||| ||||| || ||| | | Sbjct 56323 TACAAGAATCCCGAAAGTTCAACAACTTTTACAAGACTT-GTTCAACGGAAAAGAGCTCT 56381 Query 552199 ATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | ||||| | || ||||| || || || || || || || || |||| || || ||| Sbjct 56382 GTAAAAGTATAAACCCAGACGAAGCGGTGGCTTACGGGGCAGCGGTTCAGGCGGCGATTT 56441 Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 | ||| || | |||||| | ||| || || | || | ||||| ||||||||| Sbjct 56442 TAAGCGGAGAAGGAAACGAAAAAGTTCAAGATCTTCTCCTACTGGATGTGACTCCTCTAA 56501 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 ||| || |||||||| | || ||| ||||||| || || ||||| || || | Sbjct 56502 GTCTCGGATTAGAAACTGCCGGCGGTGTTATGACCGTACTAATTCCGAGAAACACAACGA 56561 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 |||| || || | | || || || ||||| |||||||| ||| |||| | Sbjct 56562 TTCCGACGAAGAAGGAGCAGATTTTCTCAACTTATTCGGATAATCAGCCTGGTGTTTTGA 56621 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 | ||| ||| ||||||||| || | || | ||| || || | || || | || Sbjct 56622 TCCAAGTTTACGAAGGAGAACGAGCAAGAACCAGAGACAACAACCTGCTCGGAAAATTCG 56681 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | | || || ||||| || || | || || || ||| || | ||| |||||||| Sbjct 56682 AACTGACCGGAATCCCTCCGGCGCCGAGAGGTGTGCCTCAAGTTAACGTTGTTTTCGATA 56741 Query 552559 TCGATGCCAATGGAAT 552574 | || || || ||||| Sbjct 56742 TAGACGCTAACGGAAT 56757 Score = 154 bits (170), Expect = 1e-31 Identities = 369/554 (67%), Gaps = 13/554 (2%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| ||||| || ||| | || || ||||| || || ||||| || |||| || | | Sbjct 55309 AGCCATAGGAATTGATCTTGGCACTACATACAGCTGCGTTGGAGTATGGCTCAACGATCG 55368 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| || ||||| |||||||| ||| | || ||||| || || || | ||||| Sbjct 55369 AGTTGAAATAATCGCCAACGATCAAGGCAACCGTACGACTCCTTCCTACGTGGCCTTCAC 55428 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | ||| | || ||||| || || | || | | |||||| || Sbjct 55429 TGACACAGAGCGATTAATCGGCGATGCGGCGAAGAACCAGGTGGCGATGAATCCTCAGAA 55488 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | || |||||||| ||| | || || | | || |||| || | |||||| Sbjct 55489 TACGGTCTTCGATGCTAAGCGTCTGATCGGCCGTCGATTCTCTGATCCGTCGGTTCAGAG 55548 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGG---AAAACCTTAT----A 550283 |||||||||| ||||| || || || | | | | | || | ||| | Sbjct 55549 CGATATGAAGCTCTGGCCGTTT-AAGGTGATCCCGGGACAAGGCGATAAGCCTATGATAA 55607 Query 550284 TTGA-AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATG 550342 ||| | |||| ||||| | || ||||||||| |||| | |||||||| ||| Sbjct 55608 TTGTGAACTACA----AAGGAGAAGAGAAGCAATTTTCAGCAGAGGAGATTTCATCCATG 55663 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 || || || || |||| | || | |||||| | ||||| || | | || Sbjct 55664 GTGTTGATTAAGATGAGAGAAGTCTCTGAAGCTTTTCTCGGTCACTCCGTCAAAAACGCC 55723 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || ||||||||||||| ||||| || || || ||||| ||||| || || ||||||||| Sbjct 55724 GTCGTAACTGTACCAGCGTATTTCAACGATTCGCAACGGCAAGCGACGAAGGATGCTGGA 55783 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 ||| | ||| | || || | | || |||||||| || || || || || |||| Sbjct 55784 GCGATTTCGGGATTGAACGTGTTGAGGATCATCAATGAGCCGACCGCCGCGGCTATTGCG 55843 Query 550523 TATGGACTTGATAA 550536 || ||| | ||||| Sbjct 55844 TACGGATTGGATAA 55857 >seq554 Length=213530 Score = 141 bits (156), Expect = 7e-28 Identities = 567/878 (65%), Gaps = 26/878 (3%) Strand=Plus/Minus Query 551735 TGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGA 551794 ||| || ||||||| | | ||||||| | ||||| || |||||| |||||| Sbjct 121924 TGATGTTTCTCTTCTCACAATTGAAGATGATATCTTTCAAGTTAAGGCTACTGTTGGAGA 121865 Query 551795 TTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGAT 551852 | |||||||||| || |||||||||||||| || || || |||| |||| | ||| Sbjct 121864 TACTCATCTTGG-GGTGAAGATTTTGATAACAGGCTTGTGAATCACTTTGTG--GCAGAG 121808 Query 551853 TTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGA 551912 ||||| |||| |||| ||| | | ||| | |||| | | | | ||| Sbjct 121807 TTTAATAGAAAGCACAAGAAAGATGTTAGTGGCAATGCTAGAGCTTTGAGAAGGTTGAGA 121748 Query 551913 ACTGCTTGCGAAAGAGCCAA-ACGAGC---TCTTTCATCTGGTACTCAAACCACTATTGA 551968 | || || || ||||| || | || |||||| || |||||||||| || || Sbjct 121747 ATGGCATGTGAGAGAGCAAAGAGGATTCTTTCTTTCTTCGACCACTCAAACCAAAATCGA 121688 Query 551969 AGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGA 552028 ||| || ||| | | | || |||||| | | ||||| | || || | ||||| Sbjct 121687 AGTTGACTCACTTTACCAAGGTGTTGATTTCTACTCTACTATTACTAGAGCAAGGTTTGA 121628 Query 552029 AGATATTTGTTCT--GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||| ||| | || | |||||| || || || | || || || ||| || Sbjct 121627 AGAG--TTGAACATGGACTTGTTTAGACAATGTATAAAAACTGTTGAGAAATGTTTGAGT 121570 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 || || || ||||| || | | || |||| | || ||||||||||| || ||||| Sbjct 121569 GACTCTAAAATTGAGAAGACTCATGTTGATGAGGTAGTTCTTGTTGGTGGGTCGACAAGG 121510 Query 552147 ATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGT 552206 ||||| ||| || || | ||| || ||||| || || || | |||| Sbjct 121509 ATTCCCAAAGTTGAGCAACTTTTACAAGATTTCTTCAACGGCAAGGAACTTTGCAAAAGC 121450 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 | || ||||||||||||||||| ||||| || ||| ||||||| ||||||||| ||| Sbjct 121449 ATAAACCCAGATGAGGCTGTTGCTTATGG-GCTGCAGTTCAAGCTGCTATTCTTAGTGGT 121391 Query 552267 CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 || |||| ||| | ||| | | | || | ||||| || ||||| || || Sbjct 121390 GAAGGGAATGAGAAAGTTCAAGACTTGCTTCTCCTCGATGTCACACCTCTCAGCCTCGGA 121331 Query 552327 TTAGAAACA---GTTGGAGGTATTATGACTAATCTT-ATCGATAGAAATACTACTATTCC 552382 | | |||| ||||||| | | | | | |||| || |||||| | || ||||| Sbjct 121330 ATGGGAACAACTGTTGGAG---TAACGGC-AGTCTTGATTCCTAGAAACTCAACGATTCC 121275 Query 552383 TTGTAAAAAATCTCGTGTATTTT--CTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 | | | | ||||| | || | || ||||| ||| || ||| | ||| Sbjct 121274 AACCATGAGA--GAGAAAATTTTCACCACTTGTTTTGATAACCAACTTGGAGTTTCGATT 121217 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 | | |||||| |||||| | | ||||| || || | ||||| | ||| | Sbjct 121216 TATGTCCATGAAGGTGAAAGAGACAGAAGCAAAGACAACAACCTTCTTGGCAAGTTTGAG 121157 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || | || |||||||||||||| | || || || ||||| | || ||||||||| Sbjct 121156 CTACATGGCATTCCTCCTGCTCCAAGAGGTGTTCCTCAAATCAATGTCTGTTTCGATATG 121097 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||||| ||||| ||| | ||||| ||||| ||||| Sbjct 121096 GATGCTAATGGTATTCTTAATGTTTCTGCTGAGGATAA 121059 Score = 132 bits (146), Expect = 4e-25 Identities = 186/260 (72%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| || || || |||||||| || || ||||| || |||||||| | | Sbjct 122445 GCAATTGGTATCGACTTGGGGACCACATACAGCTGCGTTGGCGTGTGGCAAAACGACCAC 122386 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || || ||||| |||||||||||| |||| ||||| || |||||| ||||||| Sbjct 122385 GTTGAGATCATAGCCAACGATCAAGGTAACCGAACCACTCCTTCATATGTTGCTTTCACT 122326 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | ||| | |||||||| || || | |||| || || ||| || Sbjct 122325 GATACAGAGCGGTTAATCGGTGATGCGGCCAAGAACCAAGTTGCTATGAACCCTCAAAAC 122266 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || | || ||||| ||||| || ||| | |||||| Sbjct 122265 ACAGTCTTTGATGCCAAGAGGTTGATTGGGAGAAGATTCTCTGACCCTTTGGTTCAGTGC 122206 Query 550232 GATATGAAGCATTGGCCTTT 550251 || ||| |||||||||||| Sbjct 122205 GACATG-GGCATTGGCCTTT 122187 >seq1612 Length=101449 Score = 140 bits (154), Expect = 3e-27 Identities = 421/635 (66%), Gaps = 19/635 (3%) Strand=Plus/Plus Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816 ||||| ||| ||||| || ||| || ||| || | ||||| ||||| |||||| Sbjct 19164 GAAGAGGGTATCTTTGAGGTGAAAGCCACCGCTGGTGACACCCATCTCGGTGGAGAAGAT 19223 Query 551817 TTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAA--AGT 551872 ||||| || ||| |||| | ||| | || | || ||||| | || ||||| || Sbjct 19224 TTTGACAACAGAATGGTCAACCAT--TTCGTCCAGGAGTTTAAGAGGAAGAACAAGAAGG 19281 Query 551873 TGATCTATCTACATCTGCCAA-AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCA 551931 ||| | | | | |||| ||| ||| | | | ||||| |||| || ||||| | Sbjct 19282 ACATC-AGCGGTAAC--CCAAGAGCCCTTAGGAGGTTGAGAACATCTTGTGAGAGAGCGA 19338 Query 551932 AACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAA 551991 | | | || || || | | || ||||| || || | || || ||| ||||| | Sbjct 19339 AGAGGACCCTCTCTTCCACTGCCCAGACCACCATCGAGATCGACTCTCTATACGAGGGTA 19398 Query 551992 TTGATTA-TAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTT 552050 |||||| || | | || ||| | | |||| |||||| || || |||||||| Sbjct 19399 TTGATTTCTACTCCACC-ATTACCCGTGCCAGATTTGAGGAGCTTAACATGGATCTCTTC 19457 Query 552051 AGAAAAACAATTGAACCAGTAGAACAAGT-TTTAAGAGATTCAAAGATTGATAAATCCAA 552109 || || || || ||||| || |||| ||| || || | ||||| || || || Sbjct 19458 AGGAAGTGTATGGAGCCAGTTGAG-AAGTGTTTGAGGGACGCTAAGATGGACAAGAGCAC 19516 Query 552110 AGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT 552169 ||| ||||| | |||||||| ||||| ||||| |||||||| || | | || |||| Sbjct 19517 AGTTCATGATGTAGTGCTTGTCGGTGGTTCTACTAGAATTCCCAAGGTGCAACAATTGTT 19576 Query 552170 --AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTT 552227 ||| | | |||||||| || | | | ||| |||| ||||| ||||||||| Sbjct 19577 GCAAGATTTC--TTCAATGGAAAGGAGCTCTGCAAGAGTATTAACCCAGACGAGGCTGTT 19634 Query 552228 GCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAA 552287 || |||||||| || | || || ||||| | || || |||| || | || Sbjct 19635 GCTTATGGTGCTGCTGTCCAGGCTGCTATCTTAAGCGGTGAAGGAAATGAGAAGGTTCAG 19694 Query 552288 AATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATT 552347 | || | ||| | |||||||||||| | ||||||||||| || || | ||||||| || Sbjct 19695 GACCTTTTGCTTTTGGATGTTACTCCTTTGTCTCTTGGTTTGGAGACTGCTGGAGGTGTT 19754 Query 552348 ATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||||| | | ||| ||||| || || ||||| Sbjct 19755 ATGACAGTTTTGATC-CCAGAAACACAACCATTCC 19788 Score = 98.7 bits (108), Expect = 8e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 |||||||| || ||||| || ||||| || || || || |||||||| | | | Sbjct 18381 GCTATAGGAATCGATTTGGGTACCACTTACTCATGCGTCGGAGTTTGGCAGCACGATCGT 18440 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || || ||||||||||| ||||||||||| || || || |||||| | ||||| Sbjct 18441 GTTGAGATCATCGCCAATGATCAGGGTAACAGAACAACGCCCTCATATGTTGCATTCACT 18500 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143 || || |||| ||| | || ||||| || || Sbjct 18501 GACACCGAACGTTTGATCGGAGATGCTGCTAA 18532 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || ||||| || || || || || ||||| ||||| || ||||| ||| |||| Sbjct 18954 ACTGTCCCTGCATACTTCAACGATTCTCAGCGTCAGGCTACCAAGGATGCCGGAGTTATT 19013 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | || || | ||||||||||| || || |||||||| || |||| ||||| Sbjct 19014 GCTGGTTTGAACGTGATGCGTATTATCAACGAGCCCACTGCTGCCGCCATTGCTTATGGT 19073 Query 550529 CTTGATAA 550536 ||||| || Sbjct 19074 CTTGACAA 19081 >seq9358 Length=6319 Score = 134 bits (148), Expect = 1e-25 Identities = 175/240 (73%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 550013 ACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGAT 550072 |||||||| |||||||||||||| |||||||| | ||||| || || ||||| ||| Sbjct 5488 ACCACATACAGTTGTGTTGGTGTGTGGCAAAACGACCGCGTTGAGATCATAGCCAACGAT 5547 Query 550073 CAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGT 550132 ||||||||| | || || || ||||||||| |||| || || || | || ||| | ||| Sbjct 5548 CAAGGTAACCGGACAACACCTTCTTATGTTGCTTTTACTGATACAGGGCAGTTAATCGGT 5607 Query 550133 GATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGT 550192 ||||| || || | |||| || || ||| || || | |||||||| | | || Sbjct 5608 GATGCGGCGAAGAACCAAGTTGCTATGAACCCTCAAAACACAGTCTTTGATGCGAGAGGT 5667 Query 550193 TTAATTGG-AAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTT 550251 | | | || |||| | | ||| |||| |||||||| || |||| |||||||||||| Sbjct 5668 TGATTGGGCAAGATTCTCTGATGCTTCG---GTTCAGGCCGACATGAGGCATTGGCCTTT 5724 >seq3427 Length=45480 Score = 134 bits (148), Expect = 1e-25 Identities = 169/226 (75%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || | ||||||||| ||| ||||| || ||||||||||||| | Sbjct 42286 CCTCAGACGCAGCACCAAATGAAGGGTCGACTCCTTTTGG--ATGTTGTAATCAGCTAAA 42343 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || || |||||| | ||| || |||||||| |||||||||||||| || || || ||| Sbjct 42344 GTCCTGCCATCTTCCAATTGCTTACCGGCAAAGATAAGTCTTTGCTGGTCTGGTGGGATT 42403 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTC 563429 ||||| || ||||||||||| ||||| ||||||||||| | | | ||| || Sbjct 42404 CCTTCCTTGTCTTGAATTTTCGCCTTTACATTGTCAATTGTATCCGAGCTTTCTAC-CTC 42462 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || |||| || || || ||||| || || || || ||||||||| Sbjct 42463 AAG-GTAATGGTCTTTCCTGTAAGGGTCTTCACAAATATTTGCATA 42507 Score = 111 bits (122), Expect = 1e-18 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| || || || ||| ||||||||||| | ||| ||| Sbjct 42517 AGACGAAGCACGAGATGAAGTGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTT 42576 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || ||||| || |||||||| |||||||| ||||| || || || || ||||| Sbjct 42577 CCATCCTCGAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCTTCC 42636 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG---TGTGAGTACATTCGAGA 563433 |||||||| || || || || ||||| ||||||| | | | || |||||| Sbjct 42637 TTATCTTGGATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCA--AC-CTCGAGA 42693 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || || ||||| || || || || |||||||| Sbjct 42694 GTGATGGTCTTTCCTGTAAGGGTCTTCACAAATATTTGCAT 42734 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| ||||| ||| ||||| ||| ||||||||||| | ||| || Sbjct 41834 AGACGGAGAACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAATCAGCCAAAGTCCTA 41893 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||||| || |||||||| | || ||||| || || || || || ||| Sbjct 41894 CCATCTTCCAACTGTTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATACCCTCT 41953 Query 563377 TTATCTTGAATTTT 563390 || || |||||||| Sbjct 41954 TTGTCCTGAATTTT 41967 Score = 89.7 bits (98), Expect = 4e-12 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| ||||| | || || ||||| ||| || || || |||||||| || || || Sbjct 42058 CCTCAGACGCAACACGAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCTGCAAGTGT 42117 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 ||| ||| || ||||| || ||||| || |||||||||||||| || || || || || Sbjct 42118 CCTTCCATCCTCGAGTTGCTTACCGGCGAAGATAAGTCTTTGCTGGTCTGGTGGGATGCC 42177 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414 ||||| || |||||||| ||||| || |||||||| Sbjct 42178 CTCTTTGTCCTGAATTTTCGCCTTTACATTGTCTATTGTATC 42219 Score = 89.7 bits (98), Expect = 4e-12 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| | ||| || || || |||||||| || || ||||||||||||||| | ||| Sbjct 42741 CCTCAAACGCAGCACGAGGTGAAGGGTTGACTCCTTCTGAATATTGTAATCAGCCAAAGT 42800 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 ||| |||||| | ||| || || |||||||| | || || ||||| || ||||| || Sbjct 42801 CCTTCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTCTGTTGATCTGGGGGAATCCC 42860 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGA 563431 || || ||||| || || || || || || ||||||| | || || | Sbjct 42861 CTCCTTGTCTTGGATCTTAGCCTTAACATTGTCTATGGTATCAGAACTCTCCAC-CTCAA 42919 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| | || |||||||| | ||||| || || |||||||| Sbjct 42920 GAGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATTTGCAT 42962 >seq489 Length=226806 Score = 123 bits (136), Expect = 2e-22 Identities = 335/500 (67%), Gaps = 26/500 (5%) Strand=Plus/Minus Query 551761 ATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTG 551820 ||||| ||||| || || ||||| ||||||||| | ||||||||||| |||||||||| Sbjct 125100 ATGGTGTCTTTGAAGTTTTGGCTACAAGTGGAGATACACATCTTGGTGGAGAAGATTTTG 125041 Query 551821 ATAATAGACTGGTATCATGGTGTGTTGAAG---ATTTTAAACGAAAAA-----ACAAAGT 551872 || | ||| | ||||| | || | ||| | |||||| |||||| Sbjct 125040 ATCACAGAGT-----CATGGACTATTTCATCAAATTGATCAAGAAAAAGTATAACAAAG- 124987 Query 551873 TGATCTATCTA-CATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCA 551931 | || || || | || || |||||| | || |||| | || |||||||| | Sbjct 124986 --ACATAAGTAACAACAGC-AAGGCTCTTGGGAAACTTAGAAAAGAATGTGAAAGAGCTA 124930 Query 551932 AACGAGCTCTT--TCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGG 551989 | ||||| | | ||| | || ||| | | ||| | || || | || || || Sbjct 124929 AGAGAGCTTTGAGTAATCAGC-AC-CAAGTGAGGCTCGAAATCGAATCCCTTTTCGATGG 124872 Query 551990 AATTGATTA-TAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCT 552048 ||||||| | | | ||| | | ||||| | |||||| || || | ||||| | Sbjct 124871 TATTGATTTCTCAGA-GCCATTAACAAGGGCTAGATTTGAGGAACTTAATATGGATCTGT 124813 Query 552049 TTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCA 552108 ||| || ||||| | ||||| || | | ||||| |||| || || | ||| | Sbjct 124812 TTAAGAAGACAATGGGGCCAGTGAAAAAGGCTTTAAAAGATGCAGGCCTTAAGAAAACTG 124753 Query 552109 AAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGT 552168 | | ||||| |||||||||||||| || ||| ||||||||||| ||| || ||| Sbjct 124752 ATATTCATGAGATTGTGCTTGTTGGAGGGAGTACTAGAATTCCTAAGGTTCAACAATTGT 124693 Query 552169 T-AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTT 552227 | ||| || ||| | ||| ||| || ||| | |||||||||| ||||||||||| Sbjct 124692 TGAAGGAATTCTTTGA-TGGGAAAGAACCAAACAAGGGTGTTAATCCTGATGAGGCTGTG 124634 Query 552228 GCCTATGGTGCCGCAATTCA 552247 ||||||||||| ||| |||| Sbjct 124633 GCCTATGGTGCTGCAGTTCA 124614 >seq10347 Length=3412 Score = 122 bits (134), Expect = 7e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| || || || || ||||| ||||| |||||||| |||||||| | Sbjct 215 GCAATTGGTATCGACTTGGGCACAACATACAGTTGCGTTGGTGTGTGGCAAAACGACCGT 156 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || || ||||||||||||||||||||||| || || || |||||| |||| || Sbjct 155 GTTGAGATCATAGCCAATGATCAAGGTAACAGAACAACACCTTCCTATGTTGCTTTTACT 96 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | ||| | |||||||| || || | |||| || || ||| || Sbjct 95 GATACAGAGCGGTTAATCGGTGATGCGGCGAAGAACCAAGTTGCTATGAACCCTCAAAAC 36 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAG 550206 || | |||||||| || | || ||||| |||| Sbjct 35 ACAGTCTTTGATGCCAAGAGGTTGATTGGGCGAAG 1 >seq711 Length=187166 Score = 107 bits (118), Expect = 2e-17 Identities = 303/454 (67%), Gaps = 20/454 (4%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACG----AGCTCTTTCATCTGGTACTCAAACCACTAT 551965 ||||| ||||||| ||||| ||| | | ||||| || | | | || ||| | || Sbjct 164760 AGAACATCTTGCGAGAGAGCGAAAAGGACCATCTCTTCCA-CAG---CCCAGACCGCCAT 164705 Query 551966 TGAAGTAGATTCATTATTTGAGGGAATTGATTA-TAATACGCCTATTTCGAGGGCCAAAT 552024 || | |||| ||| |||||| ||||||| || | | ||| || | | ||||||| Sbjct 164704 CGAGATTGATTGCCTATATGAGGGTATTGATTTCTACTCCCCCT-TTACCCGTGCCAAAT 164646 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTA 552083 |||| || | | ||||| || || || || || | ||| || |||| ||| Sbjct 164645 TTGAGGAGCTCAATATAGATCTTTTCAGGAAGTGTATGGAGCAAGTCGAG-AAGTGTTTG 164587 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 || ||| | ||||| || || ||| || |||| |||||||||||||||| || || Sbjct 164586 AGTGATGCTAAGATGGACAAGATCAATGTTGATGATGTTGTGCTTGTTGGTGGTTCCACT 164527 Query 552144 AGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 ||||||| || ||| | |||| ||| | | |||||||| || | | || Sbjct 164526 AGAATTCTCAAGGTTCAACAGTTGTTGCAAGATTTC--TTCAATGGAAAGGAGCTT--TG 164471 Query 552202 AAAG--TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259 ||| | |||| || || ||||||||||| || ||||| ||| | || || |||| | Sbjct 164470 CAAGACTATTAACCCTGACGAGGCTGTTGCTTACGGTGCAGCAGTCCAGGCTGCTAACTT 164411 Query 552260 TTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATC 552319 | || ||| | | || | || | || | ||| | |||||||||||| | || Sbjct 164410 GACCGGTCAAGGAAACCAGAAGGTCCAGGACCTTTTGCTTTTGGATGTTACTCCTTTGTC 164351 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACT 552353 ||||||| | || || |||||||| || ||||| Sbjct 164350 TCTTGGTGTGGAGACTCTTGGAGGTGTTGTGACT 164317 Score = 95.1 bits (104), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| | ||||| || | || || || ||||| || ||||| ||||| || ||||| Sbjct 165129 GCAGTTGTCACTGTCCCTGTTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCC 165070 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| ||||||||| | || || | ||||||||||| || || |||||||| ||| || Sbjct 165069 GGAGTTATTGCTGGTTTGAACGTGATGCGTATTATCAACGAGCCCACTGCTGCAGCAATT 165010 Query 550520 GCATATGGACTTGATAA 550536 || || || ||||| || Sbjct 165009 GCTTACGGTCTTGACAA 164993 Score = 95.1 bits (104), Expect = 1e-13 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||||| || ||||| || || || || || ||||| | ||| Sbjct 166869 GCTATTGGAATCGATTTGGGTACCACTTACTCCTGCGTCGGAGTATGGCAGGAAGGTCGT 166810 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || |||||||||||||| |||||| |||| || ||||| |||||| ||||||| Sbjct 166809 GTTGAGATCATTGCCAATGATCAGGGTAACCGAACAACACCATCATATGTTGCTTTCACT 166750 Query 550112 GAAACTGAACATTTAGTTGGTGATG 550136 || || || | || | ||||||| Sbjct 166749 GATACCGAGCGCTTGATCGGTGATG 166725 >seq2770 Length=58540 Score = 96.9 bits (106), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||| || |||||| || || ||| ||||||||||| ||||| | Sbjct 47035 AGACGAAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGA 46976 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || | ||| || || ||||| || || | ||||| || ||||| || ||||| Sbjct 46975 CCATCCTCCAATTGCTTCCCCGCAAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCC 46916 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435 || ||||| ||||| || || |||||||| |||| | | || || | ||| Sbjct 46915 TTGTCTTGGATTTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCCAC-CTCCAAAGT 46857 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| || || ||||| ||||||||| Sbjct 46856 GATGGTTTTGCCCGTAAGGGTCTTCACGAAGATTTGCATA 46817 Score = 91.5 bits (100), Expect = 1e-12 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || |||||||| || || || | || || ||||||||||||||||| || || | Sbjct 46544 ATGTTGTAATCGGCAAGGGTACGGCCGTCCTCGAGTTGTTTTCCGGCAAAGATTAGACGC 46485 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 |||||||| || |||||||| || ||||| || ||||| || || || || || Sbjct 46484 TGCTGATCTGGGGGAATTCCCTCCTTATCCTGGATTTTGGCCTTGACGTTGTCGATCGTG 46425 Query 563413 TCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| ||| | | ||| ||||||| || |||||||| | || ||||| || || || Sbjct 46424 TCAG-ATGATTCAACTTCAAGAGTAATTGTCTTACCAGTCAAGGTCTTAACAAAGATCTG 46366 Query 563472 CATA 563475 |||| Sbjct 46365 CATA 46362 >seq1285 Length=121573 Score = 95.1 bits (104), Expect = 1e-13 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || ||||| || || || || ||| | ||| || ||||||||||| || ||| Sbjct 51379 ACTGTCCCTGCATACTTCAACGATTCTCAAAGAACAGCAACAAAAGATGCTGGTCGGATT 51438 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | | |||||||||||||| ||||| || || ||||| || | ||||||||| Sbjct 51439 GCTGGTTTGGAAGTTCTTCGTATTATAAATGAGCCAACCGCTGCATCATTAGCATATGGA 51498 Query 550529 CTTGA 550533 |||| Sbjct 51499 TTTGA 51503 >seq5124 Length=25185 Score = 89.7 bits (98), Expect = 4e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| ||| | || ||||| ||| ||||||||||| | | || ||| | || Sbjct 12992 TATTGGTATCGATCTTGGTACCACTTATTCATGTGTTGGTGTGTATAAGAACGGTCACGT 12933 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 |||||| || ||||| || ||||| ||| | | ||| || || | ||| | ||||| || Sbjct 12932 TGAAATCATAGCCAACGACCAAGGAAACCGTATTACACCGTCATGGGTTGCGTTCACTGA 12873 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 ||| || || ||||||| |||||||| | || || | | ||||| | || Sbjct 12872 AACCGAGAGGTTGATTGGTGAGGCAGCAAAGAACCAGGCGGCCGTCAATCCCGAAAGGAC 12813 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAA 550205 ||| ||||||| || | | || ||||||| Sbjct 12812 TATCTTTGATGTCAAGAGACTTATCGGAAGAA 12781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028708453093900