Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2658 307 8e-78 seq554 214 1e-49 seq1612 152 4e-31 seq489 134 1e-25 seq1670 109 4e-18 seq10347 102 6e-16 seq711 93.3 3e-13 seq9358 86.0 5e-11 >seq2658 Length=61179 Score = 307 bits (340), Expect = 8e-78 Identities = 973/1485 (66%), Gaps = 36/1485 (2%) Strand=Plus/Minus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 || ||||| || || || || || | ||| || || | || |||||| || |||||| Sbjct 56766 ACGTTAAGGATTCCGTTAGCGTCTATATCGAAAACAACGTTAACTTGAGGCACACCTCTC 56707 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | || || ||||| || || | ||| |||| || || || ||| | || | Sbjct 56706 GGCGCCGGAGGGATTCCGGTCAGTTCGAATTTTCCGAGCAGGTTGTTGTCTCTGGTTCTT 56647 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 |||||| || ||| ||| |||||| ||| ||| |||||||| |||||||||| Sbjct 56646 GCTCGTTCTCCTTCGTAAACTTGGATCAAAACACCAGGCTGATTATCCGAATAAGTTGAG 56587 Query 281612 AATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 || | |||| || | | ||||| ||||||||||| ||| | |||||||| Sbjct 56586 AAAA-TCTGCTCCTTCTTCGTCGGAATCGTTGTGTTTCTCGGAATTAGTACGGTCATAAC 56528 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||| || || |||||||| || ||| |||||||| ||||| | ||||| || || ||| Sbjct 56527 ACCGCCGGCAGTTTCTAATCCGAGACTTAGAGGAGTCACATCCAGTAGGAGAAGATCTTG 56468 Query 281731 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 || |||||| | || || | ||| || || |||| || || || || || || Sbjct 56467 AACTTTTTCGTTTCCTTCTCCGCTTAAAATCGCCGCCTGAACCGCTGCCCCGTAAGCCAC 56408 Query 281791 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAA 281849 ||||| || || || | | ||| | || | ||| || ||||| || | ||| || || Sbjct 56407 CGCTTCGTCTGGGTTTATACTTTTACAGAGCTCTTTTCCGTTGAACAAGTCTTGTAA-AA 56349 Query 281850 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 281909 ||||| || || || || | | ||||| || ||||| || | || || | ||| Sbjct 56348 GTTGTTGAACTTTCGGGATTCTTGTAGATCCACCGACTAAAACCACCTCGTGGATCTGAC 56289 Query 281910 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTC-TAAAC 281968 || || | ||| | ||| |||| ||| || || || || | | || ||| ||||| Sbjct 56288 TCTTGTCAATTTTAGCATCGCGTAAACATTTCTCCACTGGCTCCATA-CATCTCTTAAAC 56230 Query 281969 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 282028 || || | | |||||||||| | ||||| || | ||| | | |||| |||||| Sbjct 56229 AAATCCATATTCAATTCTTCGAATCTCGCTCTGGTTATTGTGGCGTAGAAATCGATTCCT 56170 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 ||| | |||||||| | |||||| || |||||||| | ||| || | | || || || Sbjct 56169 TCGTATAAAGAATCGATTTCAATTGTCGTTTGAGTTGTAGACGACAACGTTCGCTTCGCT 56110 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTT 282146 | || || || || || | || | | | | | || ||| | | ||| | | Sbjct 56109 CTCTCGCAAGCGGTTCTCAATCGCCTCAGTGATCTCGC--GTTGCCGCTAATATCCTTCT 56052 Query 282147 TATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAAAATCTTCA 282205 ||| |||||| | || || ||| | | || | || | | ||||| ||||||||| Sbjct 56051 TATTCTTTCTCCTAAATTCAGAAACGAAATGAT-TAACCATTCTGTTATCGAAATCTTCA 55993 Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 282265 ||||| | | ||||| ||| | |||||| | |||| ||| | ||| ||||| | | Sbjct 55992 CCTCCGAGATGAGTATCTCCGGCTGTAGCTTTAACTTCGAAGATTCCTTCTTCGATCGTT 55933 Query 282266 AAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT--CTT 282323 |||| | |||||| |||||||| || | ||| ||||| || || ||| || | | Sbjct 55932 AAAATTGAGACATCAAAAGTTCCACCGCCGAGATCGAAAATCAGAACGTTCTGTTCGCCT 55873 Query 282324 TGTCTTG----GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 282379 ||| | || ||||| | || ||||||| ||| || || || || ||||| || Sbjct 55872 ACTCTCGAAGCTTTCTTATCCAATCCGTACGCAATAGCCGCGGCGGTCGGCTCATTGATG 55813 Query 282380 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 282439 || ||||| || || | || | ||| ||| ||||| || || ||||| | ||| ||| Sbjct 55812 ATCCTCAACACGTTCAATCCCGAAATCGCTCCAGCATCCTTCGTCGCTTGCCGTTGCGAA 55753 Query 282440 TCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCG 282499 ||||| ||||| || || ||||| | ||||| | | | || | || | | |||| Sbjct 55752 TCGTTGAAATACGCTGGTACAGTTACGACGGCGTTTTTGACGGAGTGACCGAGAAAAGCT 55693 Query 282500 CTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGC 282559 | || | |||| ||| | || | ||| |||||||| | |||| ||| ||||| Sbjct 55692 TCAGAGACTTCTCTCATCTTAATCAACACCATGGATGAAATCTCCTCTGCTGAAAATTGC 55633 Query 282560 TTGGATTCATTTTGATATGATACTTCA-AAATAT----GGTTTATTACC---AACATTAA 282611 || || || | | || || |||| || ||| || |||| || | | Sbjct 55632 TT---CTC-TTCTCCTTTG-TAGTTCACAATTATCATAGGCTTATCGCCTTGTCCCGGGA 55578 Query 282612 TAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATC-TCTA 282670 | || ||||| ||||| |||||||| ||||| | ||| | |||| | Sbjct 55577 TCACCTTAAACGGCCAGAGCTTCATATCGCTCTGAACCGACGGATCA-GAGAATCGACGG 55519 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 || || | || || ||||| || | ||||| ||||| | || | || | || Sbjct 55518 CCGATCAGACGCTTAGCATCGAAGACCGTATTCTGAGGATTCATCGCCACCTGGTTCTTC 55459 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||| || || | | ||||| || || || | || || || ||||| || || Sbjct 55458 GCCGCATCGCCGATTAATCGCTCTGTGTCAGTGAAGGCCACGTAGGAAGGAGTCGTACGG 55399 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 || |||||||| || || || ||||||||| | | || ||||||| || || || || Sbjct 55398 TTGCCTTGATCGTTGGCGATTATTTCAACTCGATCGTTGAGCCATACTCCAACGCAGCTG 55339 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGCAATTTTATCTGACATT 282895 | || || || | |||||| || || || |||||| ||| || Sbjct 55338 TATGTAGTGCCAAGATCAATTCCTATGGC---TTTATCAGACTTT 55297 >seq554 Length=213530 Score = 214 bits (236), Expect = 1e-49 Identities = 602/905 (67%), Gaps = 22/905 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| | |||| ||||||||||||||||| ||||||| ||| || ||| | ||| Sbjct 121059 TTATCCTCAGCAGAAACATTAAGAATACCATTAGCATCCATATCGAAACAGACATTGATT 121118 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || ||||| ||||||| || || || | | | ||| | || ||| || Sbjct 121119 TGAGGAACACCTCTTGGAGCAGGAGGAATGCCATGTAGCTCAAACTTGCCAAGAAGGTTG 121178 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || ||||| | | || |||||| || | | || | |||| || ||| ||| Sbjct 121179 TTGTCTTTGCTTCTGTCTCTTTCACCTTCATGGACATAAATCGAAACTCCAAGTTGGTTA 121238 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT- 281655 || || |||| || || | | | | | | ||||| |||| ||||||| ||| Sbjct 121239 TCAAAACAAGTGGTGAAAATTTTCTCTCTCATGGTTGGAATCGTTGAGTTTCTAGGAATC 121298 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 || | | | | | | ||| ||| |||| | | || || ||||| |||||||| | Sbjct 121299 AAGACT-GCCGTTACTCCAACAGTTGTTCCCATTCCGAGGCTGAGAGGTGTGACATCGAG 121357 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775 || | | | ||||| ||| |||| || |||| ||||||||| ||||||| || Sbjct 121358 GAGAAGCAAGTCTTGAACTTTCTCATTCCCTTCACCACTAAGAATAGCAGCTTGAACTGC 121417 Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835 ||| ||||| |||||||| ||||| || || | ||| |||| || || ||||| Sbjct 121418 AGC-CCATAAGCAACAGCCTCATCTGGGTTTATGCTTTTGCAAAGTTCCTTGCCGTTGAA 121476 Query 281836 AAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 |||| ||| || |||||| || || ||||| | | || || ||||| | || | Sbjct 121477 GAAATCTTGTAA-AAGTTGCTCAACTTTGGGAATCCTTGTCGACCCACCAACAAGAACTA 121535 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC-TTTTTCAACGGGTTCA 281953 |||| || || | || || | ||| || | || | |||| ||| ||||| | || Sbjct 121536 CCTCATCAACATGAGTCTTCTCAATTTTAGAGT-CACTCAAACATTTCTCAACAGTTTTT 121594 Query 281954 AGACCAGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 282011 | || |||||||||||| || ||| ||||| || | |||||||||| ||| | Sbjct 121595 ATACATTGTCTAAACAAGTCCATGTTCAA--CTCTTCAAACCTTGCTCTAGTAATAGT-A 121651 Query 282012 CATTA-TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGA---GTCGAA 282067 | || |||||| |||| | | | || |||||||| || | |||||| |||||| Sbjct 121652 GAGTAGAAATCAACACCTTGGTAAAGTGAGTCAACTTCGATTTTGGTTTGAGTGGTCGAA 121711 Query 282068 G-AAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC 282126 | |||| || | || || | |||||||| | || | |||| || ||| | || Sbjct 121712 GAAAGAAAGAATCCTCTTTGCTCTCTCACATGCCATTCTCAACCTTCTCAAAGCTCTAGC 121771 Query 282127 TGATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA 282184 |||| | | | |||| | || | ||||| || || ||| | ||| | | ||| Sbjct 121772 --ATTGCCACTAACATCTTTCTTGTGCTTTCTATTAAACTCTGCCACAAAGTGATTCACA 121829 Query 282185 AGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGG 282244 || | ||||||||||||||||| || | | ||||| ||| ||||| | ||||| Sbjct 121830 AGCCTGTTATCAAAATCTTCACC-CCAAGATGAGTATCTCCAACAGTAGCCTTAACTTGA 121888 Query 282245 AAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAA 282304 || | ||||||||| | | ||||| ||||||| || |||||||| | ||| ||| Sbjct 121889 AAGATATCATCTTCAATTGTGAGAAGAGAAACATCAAATGTGCCACCACCAAGATCGAAA 121948 Query 282305 ATAAG 282309 || || Sbjct 121949 ATCAG 121953 Score = 102 bits (112), Expect = 6e-16 Identities = 154/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 282663 AATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCT 282721 ||||| || ||||| || | || |||||||| | || || || || | ||| || Sbjct 122228 AATCTTCTCCCAATCAACCTCTTGGCATCAAAGACTGTGTTTTGAGGGTTCATAGCAACT 122287 Query 282722 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 282781 || | ||||| ||||| || || | | ||||| || || || | ||||||||| ||| Sbjct 122288 TGGTTCTTGGCCGCATCACCGATTAACCGCTCTGTATCAGTGAAAGCAACATATGAAGGA 122347 Query 282782 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 282841 || || || ||||||||||| || || || || ||||| | | |||||||| || || Sbjct 122348 GTGGTTCGGTTACCTTGATCGTTGGCTATGATCTCAACGTGGTCGTTTTGCCACACGCCA 122407 Query 282842 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || || || | || || || || || |||||||| || Sbjct 122408 ACGCAGCTGTATGTGGTCCCCAAGTCGATACCAATTGC 122445 >seq1612 Length=101449 Score = 152 bits (168), Expect = 4e-31 Identities = 553/853 (65%), Gaps = 23/853 (3%) Strand=Plus/Minus Query 281633 GGAATTGTTGTGTTTCT---ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAA 281689 ||||| ||||||||||| ||||| | | ||||||| ||| ||||| || || ||| Sbjct 19788 GGAATGGTTGTGTTTCTGGGATCAAAACT----GTCATAACACCTCCAGCAGTCTCCAAA 19733 Query 281690 CCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGA 281749 |||||||| | |||||| ||||| | || | || | |||| || |||| || | Sbjct 19732 CCAAGAGACAAAGGAGTAACATCCAAAAGCAAAAGGTCCTGAACCTTCTCATTTCCTTCA 19673 Query 281750 CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACA 281809 || | ||||| || || | |||||||||||| |||||||| || || || |||| | Sbjct 19672 CCGCTTAAGATAGCAGCCTGGACAGCAGCACCATAAGCAACAGCCTCGTCTGGGTTAATA 19613 Query 281810 GTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAAT 281868 | | || | || |||||||| |||| ||| || || |||| ||||| ||||| Sbjct 19612 CTCTTGCAGAGCTCCTTTCCATTGAAGAAATCTTGCAACAA-TTGTTGCACCTTGGGAAT 19554 Query 281869 ACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAAT 281927 | || || || || || | || | ||||| | ||||| | || |||| || | | Sbjct 19553 TCTAGTAGAACCACCGACAAGCACTACATCATG-AACTGTGCTCTTGTCCATCTTAGCGT 19495 Query 281928 CCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTT 281987 || ||| || ||||| || || | || || || | || ||| || | Sbjct 19494 CCCTCAAACACTTCTCAACTGGCTCCATACACTTCCTGAAGAGATCCATGTTAAGCTCCT 19435 Query 281988 CGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTT 282047 | ||| | || | |||| ||| | ||||||| || ||| | | ||| || | | Sbjct 19434 CAAATCTGGCACGGGTAATGGTGGAGTAGAAATCAATACCCTCGTATAGAGAGTCGATCT 19375 Query 282048 CAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTA 282107 | || || || || | | ||||| || | | || || | ||||| | ||| || | Sbjct 19374 CGATGGTGGTCTGGGCAGTGGAAGAGAGGGTCCTCTTCGCTCTCTCACAAGATGTTCTCA 19315 Query 282108 GTCTTCGTAAGGCT-TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCT 282166 || | | |||| || | | | | | | || | || | || ||||| || || Sbjct 19314 ACCTCCTAAGGGCTCTTGGGTTACCG-CTGATGTCCTTCTTGTTCTTCCTCTTAAACTCC 19256 Query 282167 TCAACACACCATG--TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTC 282224 | || | ||| | || | | || ||||||||||| || || | | || | | Sbjct 19255 TGGACGAA--ATGGTTGACCATTCTGTTGTCAAAATCTTCTCCACCGAGATGGGTGTCAC 19198 Query 282225 CTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGG 282284 | | || ||| | || | || | || ||||||| | | || | |||||| | Sbjct 19197 CAGCGGTGGCTTTCACCTCAAAGATACCCTCTTCAATGGTAAGGAGGGACACATCAAAAG 19138 Query 282285 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC-TTGG-----TTTTTAT 282338 | ||||| |||| |||||| || | |||||| | || | ||| || || | Sbjct 19137 TACCACCTCCCAAATCAAAGATCAAAACATTCTTCTCACCAACGCTGGTGGCCTTCTTGT 19078 Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398 |||||||||| |||| || |||||||| || || || ||||| | || || || | || Sbjct 19077 CAAGACCATAAGCAATGGCGGCAGCAGTGGGCTCGTTGATAATACGCATCACGTTCAAAC 19018 Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 ||||||| ||| ||||| || || || || | || |||||||| || |||||||| | Sbjct 19017 CAGCAATAACTCCGGCATCCTTGGTAGCCTGACGCTGAGAATCGTTGAAGTATGCAGGGA 18958 Query 282459 CAGTAATAACGGC 282471 |||| | |||||| Sbjct 18957 CAGTGACAACGGC 18945 >seq489 Length=226806 Score = 134 bits (148), Expect = 1e-25 Identities = 457/698 (65%), Gaps = 27/698 (4%) Strand=Plus/Plus Query 281768 TGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTA 281827 |||| ||||||||||| || ||||| ||||||||||||||| | ||| ||| ||| Sbjct 124614 TGAACTGCAGCACCATAGGCCACAGCCTCATCAGGATTAACACCCTTGTTTGGTTCTTTC 124673 Query 281828 CCATTGAAAAAATT--TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAA 281885 |||| ||| |||| | || || |||| ||||||||||| | || ||||||| Sbjct 124674 CCATC-AAAGAATTCCTTCAACAA-TTGTTGAACCTTAGGAATTCTAGTACTCCCTCCAA 124731 Query 281886 CTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC-TTTTTCA 281944 | | ||||| ||||| | | | ||| | || || ||| |||| | ||||||| Sbjct 124732 CAAGCACAATCTCATGAATATCAGTTTTCTTAAGGCCTGCATCTTTTAAAGCCTTTTTCA 124791 Query 281945 ACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 282004 || || | || |||||| || | |||||| || ||| |||| || || Sbjct 124792 CTGGCCCCATTGTCTTCT-TAAACAGATCCATATTAAGTTCCTCAAATCTAGCCCTTGTT 124850 Query 282005 AGAG----TGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 282060 | | ||| | ||||||| || ||||| | || || | ||| | | | ||| Sbjct 124851 AATGGCTCTGAGA----AATCAATACCATCGAAAAGGGATTCGATTTCGAGCCTCACTTG 124906 Query 282061 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 282120 | | | | || | ||||| | ||||||| || | || ||| ||| ||| Sbjct 124907 GTGCTGATTACTCAAAGCTCTCTTAGCTCTTTCACATTCTTTTCTAAGT-TTCCCAAGAG 124965 Query 282121 TTTTGCTGAT-TGATTCAAATCTGTTTTATATTTTCTCTTGA--AATCTTCAACACACCA 282177 |||||| | | | | | ||| | ||||| ||| |||||| ||| || | | | Sbjct 124966 CCTTGCTGTTGTTACTTATGTCTTTGTTATACTTTTTCTTGATCAAT-TTGATGAAA--- 125021 Query 282178 TGTTACAAGACGATT--ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 282235 | | || ||| | |||||||||||| || || | | |||| ||| ||||| Sbjct 125022 TAGTCCATGACTCTGTGATCAAAATCTTCTCCACCAAGATGTGTATCTCCACTTGTAGCC 125081 Query 282236 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCC 282295 |||| || | |||| |||| | ||| | | | |||||| || |||||||| Sbjct 125082 AAAACTTCAAAGACACCATTATCAATGGTCAAGATACTGACATCAAAAGTACCACCACCA 125141 Query 282296 ATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAA 282355 | |||||| | | | |||| |||| || || ||||| | |||||| |||||| Sbjct 125142 AGATCAAACACCAAAATATTC---TCTTCTCCTCCTTTCTTATCTAAACCATAGGCAAAA 125198 Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 || |||||||| || || || || ||||| ||||| || ||||| || | |||||| Sbjct 125199 GCTGCAGCAGTGGGCTCGTTGATTATTCTAGCCACATTGAGCCCAGCTATGGTGCCTGCA 125258 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 || || || |||||||| || | ||| || |||||||| Sbjct 125259 TCCTTTGTTGCTTGTCTCTGAGCATCATTGAAATATGC 125296 >seq1670 Length=98371 Score = 109 bits (120), Expect = 4e-18 Identities = 252/375 (67%), Gaps = 11/375 (3%) Strand=Plus/Plus Query 892250 AATTGATACTATTGTGCATTTTGCTGCTCATTCTCATGTCGATAATTCCTTTAAAAATTC 892309 ||||||||| || ||||||| || ||||| | ||||| || ||||||||| ||| Sbjct 52956 AATTGATACAATAATGCATTTCGCAGCTCAGACCCATGTTGACAATTCCTTTGGAAACAG 53015 Query 892310 TCTTGCTTTTACTGAAACAAATGTTTTTGGAACCCATGTTTTACTAGAATGTTCTCGAAT 892369 | ||| |||||| ||| || | | ||| || ||||| | ||||| || || Sbjct 53016 TTTTGAATTTACTAAAAACAACATATATGGTACTCATGTCCTCTTAGAAGC--CTGCAAA 53073 Query 892370 GTA--TGGCAAACTAAAATTATTTTTCCATATGAGTACTGATGAAGTTTATGGTGAAATC 892427 || ||| || | | | || ||||| |||| || |||||||| || ||||||| Sbjct 53074 GTCACTGGTCAAATCAGAAGGTTCATCCATGTGAGCACAGATGAAGTGTACGGTGAAACA 53133 Query 892428 GAT-ACTACG-----GATACTAGTCGTGAAGTTTCTTTATTGTGTCCTACAAATCCTTAT 892481 || | ||| ||| | || ||| | ||| | || |||||||| ||| Sbjct 53134 GAAGAAGACGCTGTTGATGGAAATCATGAGGCTTCCCAGCTCCTCCCCACAAATCCATAT 53193 Query 892482 GCTGCAACAAAAGCTGGTGCAGAACACATCGTAAAATCATATTTTTTGTCGTATAAATTA 892541 |||| ||||||||||| |||||| | || | ||||| |||||| |||| Sbjct 53194 TCTGCTACAAAAGCTGGGGCAGAAATGCTTGTTATGGCATATGGGCGATCGTATGGATTA 53253 Query 892542 CCTATTATTATTGCTCGATGTAATAATGTCTATGGTCGTAATCAATATCCTGAAAAACTT 892601 ||| | || | || || | |||||||| ||||| | |||||||| ||| ||||| || Sbjct 53254 CCTGTAATAACAACTAGAGGAAATAATGTGTATGGGCCTAATCAAT-TCCCGAAAAGCTC 53312 Query 892602 ATTCCTAAATTTATT 892616 ||||| ||||| ||| Sbjct 53313 ATTCCAAAATTCATT 53327 >seq10347 Length=3412 Score = 102 bits (112), Expect = 6e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| || | || |||||||| | || || || || | ||| |||| | || Sbjct 7 CCAATCAACCTCTTGGCATCAAAGACTGTGTTTTGAGGGTTCATAGCAACTTGGTTCTTC 66 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||| || || | | ||||| || ||||| | |||||| || || ||||| | Sbjct 67 GCCGCATCACCGATTAACCGCTCTGTATCAGTAAAAGCAACATAGGAAGGTGTTGTTCTG 126 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 |||||||||||||| || || || ||||| | |||||||| ||||| || ||||| Sbjct 127 TTACCTTGATCATTGGCTATGATCTCAACACGGTCGTTTTGCCACACACCAACGCAACTG 186 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGC 282879 | ||||| || || || |||||||| || Sbjct 187 TATGTTGTGCCCAAGTCGATACCAATTGC 215 >seq711 Length=187166 Score = 93.3 bits (102), Expect = 3e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 282735 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 282794 |||| || |||| | || || || || || | |||||||||||| ||||| || |||| Sbjct 166725 CATCACCGATCAAGCGCTCGGTATCAGTGAAAGCAACATATGATGGTGTTGTTCGGTTAC 166784 Query 282795 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 282854 | |||||||| ||||| || ||||| ||| | |||||||| || || || ||| Sbjct 166785 CCTGATCATTGGCAATGATCTCAACACGACCTTCCTGCCATACTCCGACGCAGGAGTAAG 166844 Query 282855 TTGTTCCTAAATCAATACCAATAGCA 282880 | || || ||||| || ||||||||| Sbjct 166845 TGGTACCCAAATCGATTCCAATAGCA 166870 >seq9358 Length=6319 Score = 86.0 bits (94), Expect = 5e-11 Identities = 132/187 (71%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 282663 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTT 282722 ||||| ||||| || | | | |||||||| | || || || || | ||| ||| Sbjct 5682 AATCTTGCCCAATCAACC-TCTCGCATCAAAGACTGTGTTTTGAGGGTTCATAGCAACTT 5624 Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 282782 | | || || ||||| || || | || |||| || ||||| | |||||| || || | Sbjct 5623 GGTTCTTCGCCGCATCACCGATTAACTGCCCTGTATCAGTAAAAGCAACATAAGAAGGTG 5564 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 |||| || ||||||||||| || || || || ||||| | |||||||| ||||| | Sbjct 5563 TTGTCCGGTTACCTTGATCGTTGGCTATGATCTCAACGCGGTCGTTTTGCCACACACCAA 5504 Query 282843 CACAACT 282849 ||||||| Sbjct 5503 CACAACT 5497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740084945950860