Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3427 87.8 2e-12 >seq3427 Length=45480 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| || || ||||| ||||| | ||||| | || || ||| | Sbjct 42280 CATGCAGATCTTTGTGAAGACCTTAACTGGAAAGACCATCACTTTGGAGGTAGAAAGCTC 42221 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || || | ||||| |||||| || |||||||| || || || || || Sbjct 42220 GGATACAATAGACAATGTAAAGGCGAAAATTCAGGACAAAGAGGGCATCCCACCAGACCA 42161 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||||||||| || | || ||| || |||||||| |||| || | | |||||||| Sbjct 42160 GCAAAGACTTATCTTCGCCGGTAAGCAACTCGAGGATGGAAGGACACTTGCAGATTACAA 42101 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 || || || || || || |||| | ||||| Sbjct 42100 CATCCAGAAGGAGTCTACTCTTCACCTCGTGTT 42068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445032587515200