Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1831 127 3e-24 >seq1831 Length=90912 Score = 127 bits (140), Expect = 3e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 ||| || ||||| | || | |||||| | |||| | |||| | ||| |||| ||| || Sbjct 15805 TCCCCCTTGATCAACATAACGGGCAGTATCATTAAAAACTCGTATCATAGGAACAATGCC 15864 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| ||| | |||||||| ||| ||||||||| ||| | || ||||| || || || Sbjct 15865 ATTTGATGTTCCATTTGTCCCACGAATATAACTCCCTGTGGCACGAATGTTGTGAACTGA 15924 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || ||| ||| | |||||| |||||| || |||||||| Sbjct 15925 GACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCTTTCAAGGTATCATATAT 15984 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 || || |||||||||||| |||| | ||| || |||||| Sbjct 15985 GCCTTCAATGCTATCATCTTTCATACACAAAAGGAAGCAGCTA 16027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686813405540400