Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03] 11,110 sequences; 585,823,666 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1439 98.7 1e-15 >seq1439 Length=111383 Score = 98.7 bits (108), Expect = 1e-15 Identities = 190/278 (68%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211 ||| ||||||||||| ||||| || || || ||||| || || | ||||||||| || Sbjct 101129 AAACCCATCCATCTCTGTCAATAGCTGGTTAATGGTCTGCTCTCTCTCATCATTCCCACC 101188 Query 14212 CATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 14271 | ||| || | | || | || || || ||||||||||| || || || || || Sbjct 101189 TCCAAGACCAGCCCCTCTCTGTCTCCCAACTGCATCAATTTCATCTATAAACACAATGCA 101248 Query 14272 TGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCA 14330 || || |||| || ||| ||||| | ||| || ||||| ||||| || |||| Sbjct 101249 -GGGTGCTTTTGACTTGGCCTTCTCAAACAAATCCCGGACTCTGGACGCACCAACTCCCA 101307 Query 14331 CAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCG 14390 |||||| |||||||| | | || | |||| || || || ||| | ||||| | Sbjct 101308 CAAACAATTCCACAAACTCTGAAGCTGCACATGAGAAAAACGGCACGCCGGCCTCACCAG 101367 Query 14391 CGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 14428 | | ||||| || | |||||||| || || || ||| Sbjct 101368 CCACTGCTCGAGCCAAAAGGGTCTTTCCAGTACCAGGT 101405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618349314811600