Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq267 143 4e-29 seq134 140 5e-28 seq82 134 2e-26 seq60 131 3e-25 seq325 125 1e-23 seq233 125 1e-23 seq281 102 1e-16 seq165 102 1e-16 seq75 98.7 1e-15 seq384 93.3 6e-14 seq180 93.3 6e-14 seq244 91.5 2e-13 seq190 89.7 8e-13 >seq267 Length=1500311 Score = 143 bits (158), Expect = 4e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| | || |||||||| || ||| ||||| | || ||| Sbjct 617730 ATGCAGATTTTTGTCAAGACTTTGACGGGCAAAACCATCACTCTAGAGGTCGAGAGCTC- 617672 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || |||||||| |||||||| || |||| || || Sbjct 617671 TGATACGATTGATAACGTGAAGGCCAAGATTCAAGACAAAGAAGGGATCACACCGGACCA 617612 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || ||||| ||||| ||||||||| | || ||| |||| || |||| |||||| || Sbjct 617611 ACAGAGACTTATCTTTGCCGGAAAACAACTCGAAGATGGTCGCACTTTAGCAGATTACAA 617552 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||| || |||||||||||| | || | ||| | ||| | || ||||| Sbjct 617551 TATCCAGAAAGAATCAACTCTTCACCTTGTTCTTCGTCTCCGCGGTGG 617504 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | || || || || |||||||| || ||| |||| | || ||| | Sbjct 618186 ATGCAAATATTTGTGAAAACCCTCACTGGCAAAACCATTACTCTAGAAGTGGAGAGCTCA 618127 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | || || || ||||| || ||||| || || || || || Sbjct 618126 -GACACAATAGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCTCCGGACCA 618068 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || ||||| ||||| || || ||| | || ||| |||| ||| | | ||||| || Sbjct 618067 GCAGAGACTTATCTTTGCCGGCAAGCAACTCGAAGATGGTCGGACACTTGCGGATTACAA 618008 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| ||||| | || |||||| | ||| | || ||||| || Sbjct 618007 CATCCAGAAAGAGTCAACACTACACTTGGTTCTTCGTCTTCGTGGTGGCAT 617957 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || ||||| || |||||| | ||| | ||| | Sbjct 618414 ATGCAAATCTTTGTTAAAACCCTTACGGGCAAGACCATAACTCTTGAGGTCGAAAGTTCT 618355 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || |||||||| ||||| || | || || || Sbjct 618354 GACACGATTGACAATGTCAAGGCCAAGATCCAAGATAAGGAAGGCATCACTCCGGACCAG 618295 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || |||||||||||||| |||||| | ||||| |||| || || | ||||| || Sbjct 618294 CAGAGACTTATTTTTGCAGGTAAACAACTCGAGGACGGTCGTACTTTGGCTGATTACAAC 618235 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || ||||| | ||| | || | ||| | || ||||| || Sbjct 618234 ATCCAGAAGGAGTCAACCCTTCATCTTGTACTTCGTCTTCGTGGTGGCAT 618185 >seq134 Length=106205 Score = 140 bits (154), Expect = 5e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | |||||| | || |||||||| || ||| | ||| |||| ||| Sbjct 49143 ATGCAGATCTTTGTGAAGACATTGACTGGCAAAACCATTACTTTGGAGGTTGAGAGCTC- 49085 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | ||| || ||||| || || ||||| || || || ||||| Sbjct 49084 TGATACTATTGACAATGTTAAAGCTAAGATTCAGGACAAGGAAGGGATTCCTCCGGATCA 49025 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || |||||||| ||||| || || || ||||||||| |||| ||| | | ||||| || Sbjct 49024 GCAGAGGCTTATCTTTGCTGGTAAGCAGTTAGAGGATGGTCGCACACTTGCTGATTACAA 48965 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| || ||| | ||| | || | ||| | |||||||||| Sbjct 48964 CATTCAAAAAGAGTCTACTCTCCATCTTGTGCTTCGTCTCAGAGGTGGTAT 48914 Score = 122 bits (134), Expect = 1e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || ||||| || || |||||| ||||| |||| || | Sbjct 48459 ATGCAGATTTTTGTGAAGACCCTCACAGGGAAGACCATAACTTTAGAGGTTGAGAGTTCA 48400 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| |||| | ||| || ||||| ||||| || || || ||||| || || Sbjct 48399 -GACACAATCGATAATGTCAAAGCTAAGATTCAGGATAAGGAGGGGATCCCACCAGACCA 48341 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | || || || || || ||||| | |||||| |||| ||| | | ||||| || Sbjct 48340 GCAGCGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGCGGATTACAA 48281 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||||||||| ||| | || | || || ||| | || |||||||| Sbjct 48280 TATCCAAAAAGAATCTACTCTTCACCTTGTGTTGCGTCTTCGTGGTGGTAT 48230 >seq82 Length=470516 Score = 134 bits (148), Expect = 2e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || || || ||||| || || ||||| |||| ||| | Sbjct 87872 ATGCAGATCTTTGTGAAGACTCTCACGGGTAAAACAATCACCCTAGAGGTTGAGAGCTCA 87813 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| || || ||||||||||| || || ||||| ||||| Sbjct 87812 -GATACCATTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCACCGGATCA 87754 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || |||||||| ||||| || || || |||||||| |||| || || | ||||| || Sbjct 87753 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACCTTGGCCGATTACAA 87694 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || || | |||||||| | ||| | |||||||||| Sbjct 87693 CATCCAGAAAGAGTCCACCCTCCATTTGGTGCTTCGTCTGAGAGGTGGTAT 87643 >seq60 Length=318476 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| | || |||||||| || || | ||| |||| || | Sbjct 56076 ATGCAGATCTTTGTGAAGACGTTGACTGGCAAAACCATCACCCTCGAGGTTGAGAGTTCA 56017 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || || || || |||||||| || || ||||| ||||| Sbjct 56016 -GACACTATTGACAATGTTAAGGCTAAGATCCAGGATAAAGAGGGAATCCCACCGGATCA 55958 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || ||||| ||||| || ||||||||||||||| |||| ||| ||| || || || Sbjct 55957 GCAGAGACTTATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACACTAGCTGACTACAA 55898 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || ||||| || ||| | |||||||| | ||| | |||||||||| Sbjct 55897 TATCCAGAAAGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGAGGTGGTAT 55847 >seq325 Length=1091643 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || |||||| | ||| ||||| | Sbjct 551611 ATGCAGATCTTTGTTAAGACTCTTACCGGGAAGACCATAACTCTTGAGGTTGAAAGCTCT 551670 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || ||| || |||||||| |||||||| | || || || Sbjct 551671 GACACGATTGACAATGTCAAGGCGAAGATCCAAGATAAGGAAGGTATTACTCCGGACCAG 551730 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || ||||| ||||| || || ||| | || ||| |||| || || | ||||| ||| Sbjct 551731 CAGAGACTTATCTTTGCTGGTAAGCAACTTGAAGATGGTCGTACTTTGGCGGATTACAAT 551790 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTT-TTACGTTTACGAGGTGGTAT 124768 |||||||| || |||||| | || |||||| ||| ||| | ||||||| || Sbjct 551791 ATTCAAAAGGAGTCAACTCTACACTTGGTTCTTAGGTTGA-GAGGTGGCAT 551840 Score = 123 bits (136), Expect = 4e-23 Identities = 172/240 (72%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||| || |||||| | || ||||| | Sbjct 552068 ATGCAAATCTTTGTTAAGACCCTTACTGGCAAGACCATAACTCTTGAAGTTGAAAGCTCT 552127 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || ||||| || ||||| || | || || || Sbjct 552128 GACACGATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCACTCCGGACCAG 552187 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || ||||| ||||| || || ||| | |||||| |||| ||| | | ||||| || Sbjct 552188 CAGAGACTTATCTTTGCCGGCAAGCAACTCGAGGATGGTCGGACACTTGCGGATTACAAC 552247 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 || || ||||| |||||| ||||||||||| | ||| | || ||||| || ||| |||| Sbjct 552248 ATCCAGAAAGAGTCAACTCTGCATTTGGTTCTTCGTCTTCGTGGTGGCATGCAAATATTC 552307 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTG-AAGCAAA 124597 ||||||||||| | ||||| || || || ||||| ||||| | ||| ||| |||| | Sbjct 552296 ATGCAAATATTCGTCAAGACCCTTACCGGAAAAACCATAACATTGGAGGTTGAAAGCTCA 552355 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | || || || ||||| || ||||| || | ||| || || Sbjct 552356 -GACACAATAGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCTACCAGACCA 552414 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || ||||| || || || || ||| | |||||| ||||||| ||| ||||| || Sbjct 552415 GCAGAGACTTATCTTCGCTGGCAAGCAACTCGAGGATGGTCGAACCCTAGCGGATTACAA 552474 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || ||||| | || | || | ||| | || ||||| || Sbjct 552475 CATCCAAAAGGAGTCAACACTTCACCTAGTGCTGCGTCTTCGTGGTGGGAT 552525 Score = 96.9 bits (106), Expect = 5e-15 Identities = 165/233 (71%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | || || || || |||||||| || | | |||| |||| ||| Sbjct 551839 ATGCAAATATTTGTGAAAACTCTCACCGGCAAAACCATTATTCTAGAAGTTGAGAGC-TC 551897 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| | || || || ||||| || ||||| || | ||| || || Sbjct 551898 TGACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCTACCGGACCA 551957 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| ||||| | ||| || || ||| | |||||| ||||||| | | ||||| || Sbjct 551958 GCAAAGACTTATCTATGCGGGCAAGCAACTCGAGGATGGTCGAACCCTTGCTGATTACAA 552017 Query 124718 -TATTCAAAAAGAATCAACTTTGCATTTGGTT-TTACGTTTACGAGGTGGTAT 124768 |||| || || ||||| | || |||||| ||| ||| | |||| || || Sbjct 552018 GGGTTCAGAAGGAGTCAACACTTCACTTGGTTCTTAGGTTGA-GAGGAGGCAT 552069 >seq233 Length=166549 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || ||||| || || |||||| | ||| |||| || | Sbjct 104004 ATGCAGATTTTTGTGAAGACCCTCACAGGAAAGACCATAACTTTGGAGGTTGAGAGTTCA 104063 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| |||| | ||| || ||||| ||||| || || || ||||| || || Sbjct 104064 -GACACAATCGATAATGTCAAAGCTAAGATTCAGGATAAGGAGGGGATCCCACCAGACCA 104122 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || || || ||||| || ||||| | |||||| |||| ||| | | ||||| || Sbjct 104123 GCAGAGACTCATCTTTGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGCGGATTACAA 104182 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||||||||| ||| | || | || || ||| | || |||||||| Sbjct 104183 TATCCAAAAAGAATCTACTCTTCACCTTGTGTTGCGTCTTCGTGGTGGTAT 104233 >seq281 Length=1304507 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 124627 TTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAAT 124686 |||| || ||||| |||||||||||||||||||||||||| || ||||| || || ||| Sbjct 309973 TTCAGGACAAAGAGGGTATACCACCTGATCAACAAAGGCTCATCTTTGCTGGTAAGCAAC 310032 Query 124687 TAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGG 124746 | || ||| | ||||| || | ||||| || || || ||||| || ||| | ||| | | Sbjct 310033 TCGAAGATGGCCGAACCTTGGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTG 310092 Query 124747 TTTTACGTTTACGAGGTGGTA 124767 | || | | ||||||||| Sbjct 310093 TCTTGAGGCTCAGAGGTGGTA 310113 >seq165 Length=664114 Score = 102 bits (112), Expect = 1e-16 Identities = 172/246 (70%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 205483 GCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTA 205542 |||| |||||||||||||| | ||||||||| ||||| | |||||||||||||||| | Sbjct 156208 GCAATGTTAAATGGTACACCGAGACCCATATCGGCTGAGCGCTGATACATTTGACATGAA 156267 Query 205543 AGATATTTATTATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCAT- 205601 || | | ||| | |||| ||| || |||| || || || || | |||| Sbjct 156268 AGTTCTCCATTTGCA---ACATAAAACTGAGCAAACATGTGGCATGGAGGAAGTGCCATC 156324 Query 205602 ATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttatt 205661 | ||| | ||| ||||||||| |||| | ||| || |||| ||||| ||||| Sbjct 156325 AACTTC-AGATCAGGAGGATTCCAAGCTGACATTATGATTCGTCTATCATCAGGATTATT 156383 Query 205662 ttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC 205721 || ||||| || || | || | | |||||||||||||| ||||||| | || Sbjct 156384 CTTGATTTTGTTAATTACATCTAAGAGCTGATCAAATCCTTGGCCAGTATAATCAGCATG 156443 Query 205722 CATATC 205727 |||||| Sbjct 156444 CATATC 156449 >seq75 Length=1220249 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 124627 TTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAAT 124686 |||| || ||||| |||||||||||||||||||||||||| || ||||| || || ||| Sbjct 48535 TTCAGGACAAAGAGGGTATACCACCTGATCAACAAAGGCTGATCTTTGCTGGTAAGCAAC 48594 Query 124687 TAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGG 124746 | || ||| | ||||| || | ||||| || || || ||||| || ||| | ||| | | Sbjct 48595 TCGAAGATGGCCGAACCTTGGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTG 48654 Query 124747 TTTT 124750 | || Sbjct 48655 TCTT 48658 >seq384 Length=798633 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| ||||| | ||||| || || || ||||| || || |||| | || || | Sbjct 646320 ATGCAGATATTCGTCAAGACCCTTACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 646379 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| || || ||||| || ||||| || || || ||||| Sbjct 646380 -GACACAATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCA 646438 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || || || || || || ||||| | |||||| ||||||| | |||||| || Sbjct 646439 ACAGAGACTAATCTTCGCTGGCAAACAGCTTGAGGATGGTCGAACGCTTTCAGATTACAA 646498 Query 124718 TATTCAAAAAGAATCAAC 124735 || || ||||||||||| Sbjct 646499 CATCCAGAAAGAATCAAC 646516 >seq180 Length=4117863 Score = 93.3 bits (102), Expect = 6e-14 Identities = 170/246 (69%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 205483 GCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTA 205542 |||| |||||||||||||| | ||||||||| ||||| | |||||||||||||||| | Sbjct 3608150 GCAATGTTAAATGGTACACCGAGACCCATATCGGCTGAGCGCTGATACATTTGACATGAA 3608209 Query 205543 AGATATTTATTATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCAT- 205601 || | | ||| | |||| ||| || |||| || || || || | |||| Sbjct 3608210 AGTTCTCCATTTGCA---ACATAAAACTGAGCAAACATGTGGCATGGAGGAAGTGCCATC 3608266 Query 205602 ATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttatt 205661 | ||| | ||| ||| ||||| |||| | ||| || |||| ||||| || || Sbjct 3608267 AACTTC-AGATCAGGAGGGTTCCAAGCTGACATTATGATTCGTCTATCATCAGGATTGTT 3608325 Query 205662 ttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC 205721 || ||||| || || | || | | |||||||||||||| ||||||| | || Sbjct 3608326 CTTGATTTTGTTAATTACATCTAAGAGCTGATCAAATCCTTGGCCAGTATAATCAGCATG 3608385 Query 205722 CATATC 205727 |||||| Sbjct 3608386 CATATC 3608391 >seq244 Length=507168 Score = 91.5 bits (100), Expect = 2e-13 Identities = 162/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 124535 TACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAG 124593 |||| ||||| || ||| | ||||| || || || |||||||| || | ||| | ||| Sbjct 237049 TACAGATGCAGATCTTTGTTAAGACTCTCACCGGGAAAACTATCACCCTCGAGGTGGAAA 236990 Query 124594 CAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTG 124653 ||| ||||| || | || || || || || || |||||||| || || | Sbjct 236989 GCTCTGACACAATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGG 236930 Query 124654 ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATT 124713 |||| ||||||||||| ||||| ||||| || | || ||| | || || || | || | Sbjct 236929 ATCAGCAAAGGCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGTACCTTGGCTGACT 236870 Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || ||||| || ||||| || | || ||||| | | | || |||||||| Sbjct 236869 ACAACATTCAGAAGGAATCCACCCTCCACTTGGTCCTCAGGCTTCGTGGTGGTAT 236815 >seq190 Length=891836 Score = 89.7 bits (98), Expect = 8e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| ||||| | ||||| || || || ||||| || || |||| | || || | Sbjct 381952 ATGCAGATATTCGTCAAGACCCTTACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 382011 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| || || ||||| || ||||| || || || ||||| Sbjct 382012 -GACACAATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCA 382070 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || || || || || || ||||| | ||||| ||||||| | |||||| || Sbjct 382071 ACAGAGACTAATCTTCGCTGGTAAACAGCTTGAGGAAGGTCGAACGCTTTCAGATTACAA 382130 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||||||||| | || | || | || || ||||||| || Sbjct 382131 CATCCAGAAAGAATCAACCCTTCACCTTGTACTTCGACTAAGAGGTGGGAT 382181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755378697964800