Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq454 120 2e-22 seq244 116 3e-21 seq6139 111 1e-19 seq411 111 1e-19 seq99 111 1e-19 seq60 111 1e-19 seq177 105 5e-18 seq69 104 2e-17 seq240 102 6e-17 seq380 95.1 1e-14 seq134 84.2 2e-11 seq82 84.2 2e-11 >seq454 Length=111167 Score = 120 bits (132), Expect = 2e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| ||||| || ||||||||| ||||||||||| || | |||| || | Sbjct 50816 CAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCTGCCGTCCTCGA 50875 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||| ||||||||||| ||||| | ||| ||||| || || | |||||||||||| | Sbjct 50876 GTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGA 50935 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || |||||| | | | |||| || ||||||||||| || || ||||| | Sbjct 50936 TCTTGGCCTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATAGTCTTTC 50995 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | ||||| |||||||| ||||||||||| Sbjct 50996 CGGTCAGCGTCTTCACGAAGATTTGCAT 51023 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||||||||||||||||| |||| |||| |||| || Sbjct 50131 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCA 50190 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | ||||| ||||| ||||| | || ||||| ||| Sbjct 50191 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 50250 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | ||| || ||||| Sbjct 50251 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTC 50310 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||||||||| || ||||| Sbjct 50311 CCGGTCAACGTCTTCACAAAAATCTGCAT 50339 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || | |||| | || || || ||||| || ||||| Sbjct 50376 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAA 50435 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || ||| ||||| ||||| | || ||||||||| || || ||| || Sbjct 50436 GATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 50495 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| || ||| ||||||| |||||| ||||||| || |||||||| || Sbjct 50496 ATCAATGGTGTCTGAACTCTCAACCTCCAAGGTAATTGTCTTGCTGGTGAGAGTCTTGAC 50555 Query 45325 AAAGATTTGCAT 45336 || || ||||| Sbjct 50556 GAAAATCTGCAT 50567 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||||||||| ||||| || | |||| Sbjct 50584 AAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTATAGTCAGCCAAAGTCCTGCCGTCT 50643 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| ||||| ||||| ||||| | ||| ||||| || || | |||||||| || Sbjct 50644 TCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGTATTCCCTCCTTATCT 50703 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 |||||| || || | | | |||| | ||||||||||| ||||| ||| Sbjct 50704 TGAATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTAATAGTC 50763 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || || || ||||| ||||| Sbjct 50764 TTTCCAGTAAGGGTTTTGACGAAGATCTGCAT 50795 >seq244 Length=507168 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||||||||||||||||| |||| |||| |||| || Sbjct 235924 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCA 235983 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | ||||| ||||| ||||| | || ||||| ||| Sbjct 235984 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 236043 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | ||| || ||||| Sbjct 236044 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTC 236103 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| |||||||| ||||| Sbjct 236104 CCGGTGAGAGTCTTAACAAAGATCTGCAT 236132 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || | |||| || ||||| ||||||||||| Sbjct 236625 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCTGCCGTCCTCGAGTTGCTTTCCGGCGAA 236684 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| ||||| || || | |||||||||||| || || |||||| Sbjct 236685 GATCAACCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACGTT 236744 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| || ||| ||||||| || || ||||| || ||||| ||||| || Sbjct 236745 GTCGATGGTGTCAGAACTCTCTACCTCCAAAGTGATAGTCTTTCCGGTCAGCGTCTTGAC 236804 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 236805 GAAGATTTGCAT 236816 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45122 CTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCG 45181 |||| |||||||| || || ||||||||| ||||||||||| || | |||| | Sbjct 236146 CTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCA 236205 Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || || || ||||| || ||||| || | || ||| ||||| ||||| | || |||||| Sbjct 236206 TCCTCAAGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTG 236265 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 ||| || || ||| || | | | |||| | ||| ||||||| ||| || Sbjct 236266 TCCTGGATCTTGGCCTTCACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAGGTTATT 236325 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || |||||||| || || || ||||| Sbjct 236326 GTCTTGCCGGTGAGAGTCTTGACGAAAATCTGCAT 236360 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| ||||| ||||| || | |||| Sbjct 236377 AAGACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCCAAAGTCCTGCCGTCT 236436 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| ||||| ||||| ||||| | ||| ||||| || || | ||||||||| || Sbjct 236437 TCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTATCT 236496 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 |||||| || || | | | |||| | ||||||||||| ||||| ||| Sbjct 236497 TGAATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTAATAGTC 236556 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || || || ||||| ||||| Sbjct 236557 TTTCCAGTAAGGGTTTTGACGAAGATCTGCAT 236588 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GT-TGGCGATCGTCG 45184 |||||||| || ||| |||||||||||||||||||| || || ||| ||| ||| Sbjct 236836 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCTTCG 236895 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || |||||||| || || | || || || || ||||| | ||| ||||||||| Sbjct 236896 ---AGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTCC 236952 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || |||||| | | |||| | |||||||| | ||| || || Sbjct 236953 TGGATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTT 237012 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| |||||||| ||||| Sbjct 237013 TTCCCGGTGAGAGTCTTAACAAAGATCTGCAT 237044 >seq6139 Length=4094 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGT 45182 || |||||||| || || |||||| || ||||||||||| || ||| | ||| Sbjct 111 AAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAGGTT--CTGCCGT 168 Query 45183 CGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGT 45242 | |||| || ||||| || || ||||||| ||| ||||| || || | |||||| |||| Sbjct 169 CCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTGT 228 Query 45243 CCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCG 45302 || || || ||| || | | | |||| || ||||||||||| ||| || | Sbjct 229 CCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATAG 288 Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || |||| ||||| |||||||||||||| Sbjct 289 TCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 322 Score = 109 bits (120), Expect = 4e-19 Identities = 152/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||| ||| || | |||| || | Sbjct 343 CAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGA 402 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||| ||||||||||| ||||||| ||| ||||| ||||| | |||||||||||| | Sbjct 403 GTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGA 462 Query 45249 TTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 | || |||| | || | | | | |||| || ||||||||| | ||||||||||| Sbjct 463 -TCTTGGCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTCTTT 521 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || || || || ||||| Sbjct 522 CCGGTTAGGGTTTTGACGAAAATCTGCAT 550 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||||| ||||||||||| || || | || ||| Sbjct 570 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCCTCC 629 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || ||||||||||| || | || ||| || || || || | |||||||||||| Sbjct 630 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGG 689 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | |||| | |||||||| | ||| || ||||| Sbjct 690 ATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 749 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| || ||||| ||||| Sbjct 750 CCGGTGAGAGTCTTAACGAAGATCTGCAT 778 >seq411 Length=621170 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||| || ||| ||| | || || Sbjct 569652 ACCAAGTGAAGAGTCGACTCCTTCTGTATGTTGTAATCTGCAAGTGTCCGACCATCCTCA 569593 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || |||||||| ||||| || | | ||| ||||| ||||| | || ||||||||| Sbjct 569592 AGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGT 569533 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||||| || || |||||| Sbjct 569532 ATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAACGTGATAGTCTTG 569473 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||||||||||||||||||| Sbjct 569472 CCTGTCAAAGTCTTCACAAAGATTTGCAT 569444 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||||| ||||| || ||| ||| | || || Sbjct 569196 ACCAAGTGAAGGGTTGATTCCTTCTGAATATTGTAATCCGCAAGTGTACGACCATCCTCA 569137 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | | ||| ||||| || || | || ||||||||| | Sbjct 569136 AGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 569077 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| ||||||| ||||| || || Sbjct 569076 ATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAGAGTAATGGTTTTT 569017 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||||||||||||||| Sbjct 569016 CCAGTAAGGGTCTTCACAAAGATTTGCAT 568988 >seq99 Length=1465915 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGT 45182 || |||||||| || || |||||| || ||||||||||| || ||| | ||| Sbjct 434397 AAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAGGTT--CTGCCGT 434454 Query 45183 CGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGT 45242 | |||| || ||||| || || ||||||| ||| ||||| || || | |||||| |||| Sbjct 434455 CCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTGT 434514 Query 45243 CCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCG 45302 || || || ||| || | | | |||| || ||||||||||| ||| || | Sbjct 434515 CCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATAG 434574 Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || |||| ||||| |||||||||||||| Sbjct 434575 TCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 434608 Score = 109 bits (120), Expect = 4e-19 Identities = 152/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||| ||| || | |||| || | Sbjct 434629 CAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGA 434688 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||| ||||||||||| ||||||| ||| ||||| ||||| | |||||||||||| | Sbjct 434689 GTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGA 434748 Query 45249 TTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 | || |||| | || | | | | |||| || ||||||||| | ||||||||||| Sbjct 434749 -TCTTGGCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTCTTT 434807 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || || || || ||||| Sbjct 434808 CCGGTTAGGGTTTTGACGAAAATCTGCAT 434836 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||||| ||||||||||| || || | || ||| Sbjct 434856 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCCTCC 434915 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || ||||||||||| || | || ||| || || || || | |||||||||||| Sbjct 434916 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGG 434975 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | |||| | |||||||| | ||| || ||||| Sbjct 434976 ATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 435035 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| || ||||| ||||| Sbjct 435036 CCGGTGAGAGTCTTAACGAAGATCTGCAT 435064 >seq60 Length=318476 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||| || ||| ||| | || || Sbjct 55184 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGTGTCCGACCATCCTCA 55243 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | | ||| ||||| ||||| | || ||||||||| | Sbjct 55244 AGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGA 55303 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||||| || || |||||| Sbjct 55304 ATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAACGTGATAGTCTTG 55363 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||||||||||||||||||| Sbjct 55364 CCTGTCAAAGTCTTCACAAAGATTTGCAT 55392 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||||||||||||||| || ||| | || || Sbjct 55412 ACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCTGCAAGGGTACGACCATCCTCA 55471 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || |||||||| ||||| || | | ||| ||||| ||||| | || ||||||||| | Sbjct 55472 AGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGA 55531 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| ||||||| ||||| || || Sbjct 55532 ATCTTAGCCTTGACGTTATCTATTGTGTCTGAGCTCTCAACCTCCAGAGTAATGGTTTTT 55591 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||||||||||||||| Sbjct 55592 CCAGTAAGGGTCTTCACAAAGATTTGCAT 55620 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||| | | | ||||| || || ||| ||| ||||| || |||||||| Sbjct 55850 CCACCTCTGAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCT 55909 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| |||| | || || | |||||| ||||| || || | | ||| || || || || Sbjct 55910 AGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGG 55969 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| || ||| || || |||||| | | |||| || ||| ||| Sbjct 55970 ATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACC 56029 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| || || ||||| |||| |||||||||||||| ||||| Sbjct 56030 TCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 56076 >seq177 Length=445524 Score = 105 bits (116), Expect = 5e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||| ||| || | |||| || | Sbjct 392216 CAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGA 392157 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||| ||||||||||| ||||||| ||| ||||| ||||| | |||||||||||| | Sbjct 392156 GTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGA 392097 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | |||| || ||||||||||| ||| || ||||| | Sbjct 392096 TCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATAGTCTTTC 392037 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || || || || || || ||||| Sbjct 392036 CGGTTAGGGTTTTGACGAAAATCTGCAT 392009 >seq69 Length=1777342 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || ||||| |||||||| |||||||||||| ||| ||| |||| ||| Sbjct 335999 ACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCTTCC 336058 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||||||||||||||| ||||| || || | || |||||||| Sbjct 336059 AGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGG 336118 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | |||| ||||||||| | ||| || ||||| Sbjct 336119 ATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACTCCACCTCTAGGGTTATGGTCTTC 336178 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||| || || ||||| ||||| ||||| || Sbjct 336179 CCCGTTAGGGTTTTCACGAAGATCTGCATCTT 336210 >seq240 Length=230833 Score = 102 bits (112), Expect = 6e-17 Identities = 166/238 (70%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 45104 TCTTCGC--CACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGT 45161 ||||||| | ||||||| | | ||||| || ||||| ||| ||||| ||||||| Sbjct 111274 TCTTCGCACCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGT 111215 Query 45162 AGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGT 45221 ||||| ||| | |||| ||||| ||||| |||||||| |||| |||||| |||| Sbjct 111214 AGTCGGCGAGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGT 111155 Query 45222 CGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCAC 45281 | || || | || |||||||| || ||| || || | | |||| Sbjct 111154 CCGGTGGGATCCCTTCCTTGTCTTGGATCTTTGCTTTCACATTGTCGATCGTGTCTGATG 111095 Query 45282 CCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||| ||||| | ||| |||||||| ||||| | || ||||||||||| ||||| || Sbjct 111094 ACTCTACCTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 111037 >seq380 Length=167695 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || ||||| |||||||| ||||||||||| ||| ||| |||| ||| Sbjct 104835 ACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCTTCC 104894 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||||||||||||||| ||||| || || | || |||||||| Sbjct 104895 AGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGG 104954 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | |||| ||| ||||| | ||| || ||||| Sbjct 104955 ATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACTCGACCTCTAGGGTTATGGTCTTC 105014 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||| || || ||||| ||||| ||||| || Sbjct 105015 CCCGTTAGGGTTTTCACGAAGATCTGCATCTT 105046 >seq134 Length=106205 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||| ||||||||||| || || ||| |||| || Sbjct 48023 ACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAATCAGCCAAAGTCCGACCGTCCTCG 48082 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || || | | ||| ||||| || || | ||||| |||||| | Sbjct 48083 AGCTGTTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCCTGA 48142 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| || |||| |||||| ||||| Sbjct 48143 ATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACATCCAAGGTAATAGTCTTC 48202 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| || ||||||||||||||||| Sbjct 48203 CCTGTCAATGTTTTCACAAAGATTTGCAT 48231 >seq82 Length=470516 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||| || || ||| | || || Sbjct 87208 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTCA 87267 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | | ||| ||||| || || | || ||||||||| | Sbjct 87268 AGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 87327 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||||| | | |||| | ||| ||||||| || || |||||| Sbjct 87328 ATCTTGGCTTTAACGTTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTCTTG 87387 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||||||||| || ||||| Sbjct 87388 CCGGTAAGGGTCTTCACAAAAATCTGCAT 87416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395035784581906