Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq82 116 4e-21 seq61 113 4e-20 seq60 113 4e-20 seq454 109 5e-19 seq411 107 2e-18 seq6139 105 7e-18 seq99 105 7e-18 seq233 102 8e-17 seq134 100 3e-16 seq244 91.5 1e-13 seq267 89.7 5e-13 seq75 82.4 8e-11 >seq82 Length=470516 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| | ||| || || | || |||||||| || ||||| |||||| | Sbjct 88102 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 88161 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||||||||| || |||||| | |||||| || ||||| Sbjct 88162 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 88221 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 88222 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCGACC 88281 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| || | ||||| || || | ||||| ||||| |||||||| Sbjct 88282 TCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 88328 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||||| ||||| ||||| ||||| | |||| ||||||||||||| Sbjct 87442 TGAAGGGTAGACTCCTTTTGGATGTTGTAATCAGCGAGGGTGCGTCCGTCTTCGAGCTGT 87501 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| |||| || | ||||| || || || || ||||| ||||| ||| | || Sbjct 87502 TTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTC-TTGAATCTT 87560 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || || | | || | |||||| | | ||| ||||| | || | ||||||||||| Sbjct 87561 TGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCGGT 87620 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 | || || || || || |||||| Sbjct 87621 TAGGGTCTTCACAAAAATCTGCATA 87645 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| ||||||| |||||||| || || ||||| ||||| Sbjct 87190 CCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCTGCA 87249 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || || |||||||| ||||| |||| || | ||||| || || || Sbjct 87250 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGG 87309 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | |||| | | || | ||||| | | ||| || Sbjct 87310 ATCCCTTCCTTGTCC-TGAATCTTGGCTTTAACGTTATCAATAGTGTCTGAGCTCTCAAC 87368 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | ||||||||||| | || || || || || |||||| Sbjct 87369 CTCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCATA 87417 >seq61 Length=1440766 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| | ||| || || | || |||||||| || ||||| |||||| | Sbjct 1073654 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 1073595 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||||||||| || |||||| | |||||| || ||||| Sbjct 1073594 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 1073535 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| |||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 1073534 ATGCCTTCCCTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCGACC 1073475 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| || | ||||| || || | ||||| ||||| |||||||| Sbjct 1073474 TCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 1073428 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||||||||| ||||| ||||| | || | |||||| |||||||| || Sbjct 1074307 GTAGACTCTTTTTGGATGTTGTAATCAGCGAGGGTACGTCCGTCTTCAAGCTGTTTCCCG 1074248 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || | ||||| || || || || ||||| ||||| ||| | |||| || Sbjct 1074247 GCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCT-TGAATCTTTGCCTT 1074189 Query 139688 AGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | |||||| | | ||| ||||| | || | ||||||||||| | || Sbjct 1074188 GACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCGGTTAGGGT 1074129 Query 139747 TTTTACGAATATTTGCATA 139765 || || || || |||||| Sbjct 1074128 CTTCACAAAAATCTGCATA 1074110 >seq60 Length=318476 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || || | ||| || |||| || |||||||| || ||||| ||||| | Sbjct 56078 CCACCTCTTAGCCGGAGAACCAAATGAAGGGTTGACTCTTTCTGGATGTTGTAATCTGCC 56137 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| |||||||||||||| |||||| | ||||||||| ||||| Sbjct 56138 AAGGTACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAGGA 56197 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | |||||| | | ||| ||| Sbjct 56198 ATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTCTCAACC 56257 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | |||||||| || | ||||| ||||| |||||||| Sbjct 56258 TCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 56304 >seq454 Length=111167 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| || || || || |||||||| || || | Sbjct 50113 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 50172 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| ||| || ||||| || ||||| |||| ||||| ||||| || ||||| Sbjct 50173 AGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 50232 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| || || ||| || || | | || | ||||||| | ||| ||| Sbjct 50233 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACC 50292 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| ||| | ||||| ||||||||||| || || || || |||||| Sbjct 50293 TCAAGGGTGATGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCATA 50340 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| |||||||| || ||||||||||| || | Sbjct 50569 CCTCCACGGAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTATAGTCAGCC 50628 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| || || || ||||| |||||| | ||||| || || ||| Sbjct 50629 AAAGTCCTGCCGTCTTCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGT 50688 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || ||| |||| | ||| | | || | ||||| | | |||||| Sbjct 50689 ATTCCCTCCTTATC-TTGAATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCAC 50747 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | ||||| || || | ||||| ||||| || |||||| Sbjct 50748 CTCCAAAGTAATAGTCTTTCCAGTAAGGGTTTTGACGAAGATCTGCATA 50796 >seq411 Length=621170 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| || | ||| ||||||| || || ||||| || ||||| ||||| | Sbjct 568530 CCACCTCTTAACCGGAGAACCAAGTGAAGGGTCGATTCTTTCTGGATGTTGTAATCTGCC 568471 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| |||||||||||||| |||||| | |||||||| ||||| Sbjct 568470 AAGGTACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGA 568411 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 568410 ATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACC 568351 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | |||||||| || | ||||| ||||| |||||||| Sbjct 568350 TCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 568304 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || || || | |||||| || | ||||| || || || ||||| || || ||||| ||| Sbjct 569442 CCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTTTGGATATTGTAATCCGCT 569383 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || ||||||||||| |||||| |||| || | || || || || || Sbjct 569382 -AGCGTGCGACCATCCTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGG 569324 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | ||| | | || | |||||| | | ||| | Sbjct 569323 GATCCCTTCCTTGTC-CTGAATCTTAGCTTTGACGTTATCAATTGTGTCTGAGCTCTCAA 569265 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | |||||||| ||||| || || || || ||||||||| Sbjct 569264 CTTCCAAGGTGATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCATA 569215 >seq6139 Length=4094 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| |||||||| ||||| ||||| || || | Sbjct 96 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 155 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||| || | ||| || |||||| |||||| | ||||| || || || Sbjct 156 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 215 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || |||||||| ||| || || | | || | ||||| | ||||||| Sbjct 216 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACC 275 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | ||||| ||||||||||| || || || ||||||||| || Sbjct 276 TCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCATACCT 326 >seq99 Length=1465915 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| |||||||| ||||| ||||| || || | Sbjct 434382 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 434441 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||| || | ||| || |||||| |||||| | ||||| || || || Sbjct 434442 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 434501 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || |||||||| ||| || || | | || | ||||| | ||||||| Sbjct 434502 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACC 434561 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | ||||| ||||||||||| || || || ||||||||| || Sbjct 434562 TCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCATACCT 434612 >seq233 Length=166549 Score = 102 bits (112), Expect = 8e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | ||| ||||| | || || || || || || || ||||| | Sbjct 103546 CCACCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTCTGGATATTGTAATCCGCC 103487 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | || || ||||||||||| ||| |||||| | ||||||||| ||||| Sbjct 103486 AAGGTACGTCCA-TCCTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGG 103428 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | |||| ||| | | || | ||||| | | ||| | Sbjct 103427 GATCCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTGTCGATAGTGTCAGAGCTCTCTA 103369 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| || | |||||||| || | ||||| ||||| |||||||| Sbjct 103368 CCTCAAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 103320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| ||||| | || || || ||||| ||||||||||| | Sbjct 104458 CCACCACGAAGACGAAGAACCAAGTGGAGAGTTGATTCCTTTTGGATGTTATAATCAGCC 104399 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || || |||||||| |||||| |||| || | ||||| || || || Sbjct 104398 AAAGTCCGACCATCCTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCCGGTGGG 104339 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| ||| | || | || | | || | |||||| | | ||| || Sbjct 104338 ATCCCCTCTTTGTC-CTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAAC 104280 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | ||||| || ||||| ||||| || || ||||||||| Sbjct 104279 CTCCAAGGTAATAGTCTTCCCTGTCAATGTTTTCACAAAGATTTGCATA 104231 >seq134 Length=106205 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| ||||| | || || || ||||||||||| ||||| | Sbjct 48005 CCACCACGAAGACGAAGAACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAATCAGCC 48064 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| ||||||||||| |||||| |||| || | ||||| || || || Sbjct 48065 AAAGTCCGACCGTCCTCGAGCTGTTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGG 48124 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| ||| | || | || | | || | |||||| | | ||| || Sbjct 48125 ATCCCCTCTTTGTC-CTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAAC 48183 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||| || ||||| ||||| || || ||||||||| Sbjct 48184 ATCCAAGGTAATAGTCTTCCCTGTCAATGTTTTCACAAAGATTTGCATA 48232 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||||||||||||||| ||||| | ||||| || || | ||| |||||| Sbjct 48947 GTAGACTCTTTTTGAATGTTGTAATCAGCAAGTGTGCGACCATCCTCTAACTGCTTACCA 49006 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || | |||||||| ||||| || ||||| ||||| ||| | || | ||| Sbjct 49007 GCAAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTGTC-CTGAATCTTAGCTTT 49065 Query 139688 AGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | | || | || || | | ||| ||||| | || | || ||||| ||||| || Sbjct 49066 AACATTGTCAATAGTATCAGAGCTCTCAACCTCCAAAGTAATGGTTTTGCCAGTCAATGT 49125 Query 139747 TTTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 49126 CTTCACAAAGATCTGCAT 49143 >seq244 Length=507168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| |||||||| || || ||||| || || || ||||| || || Sbjct 236152 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCA 236211 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 |||||||| ||||| |||| || | ||||| || ||||| || ||||| ||||| | Sbjct 236212 AGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGG 236271 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||| | | ||| ||||| | ||| | |||||| Sbjct 236272 ATCTTGGCCTTCACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAGGTTATTGTCTTG 236331 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||||| | || || ||||| || |||||| || Sbjct 236332 CCGGTGAGAGTCTTGACGAAAATCTGCATACCT 236364 >seq267 Length=1500311 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | ||| ||||| | || |||||||| || ||||| ||||| | Sbjct 617959 GCCACCACGAAGACGAAGAACCAAGTGTAGTGTTGACTCTTTCTGGATGTTGTAATC-CG 618017 Query 139597 CATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || ||| ||| |||||||| || || || ||| |||| || | ||||| || ||| Sbjct 618018 CAA-GTGTCCGACCATCTTCGAGTTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGA 618076 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || ||||| ||||| ||| || || | | || | |||||| | | |||| Sbjct 618077 GGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCTATTGTGTCTGAGCTCTCC 618136 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || | || ||||| || | ||||| || ||||||||||| Sbjct 618137 ACTTCTAGAGTAATGGTTTTGCCAGTGAGGGTTTTCACAAATATTTGCAT 618186 >seq75 Length=1220249 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||||||||| || ||||| ||||| || || | |||||||| || Sbjct 48649 TGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTCGAGTTGC 48590 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 ||||||||| ||||||| | ||| ||||| || ||||| || |||||||| Sbjct 48589 TTACCAGCAAAGATCAGCCTTTGTTGATCAGGTGGTATACCCTCTTTGTC 48540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496013240251200