Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq314 122 5e-23 seq148 120 2e-22 seq53 118 6e-22 seq798 116 2e-21 seq149 116 2e-21 seq2125 114 7e-21 seq534 114 7e-21 seq386 113 2e-20 seq327 113 2e-20 seq375 111 8e-20 seq209 111 8e-20 seq140 111 8e-20 seq119 111 8e-20 seq6577 109 3e-19 seq488 109 3e-19 seq477 109 3e-19 seq127 109 3e-19 seq342 105 3e-18 seq221 104 1e-17 seq6950 102 4e-17 seq5669 102 4e-17 seq423 102 4e-17 seq377 102 4e-17 seq187 102 4e-17 seq180 102 4e-17 seq178 102 4e-17 seq16 102 4e-17 seq7 102 4e-17 >seq314 Length=234485 Score = 122 bits (134), Expect = 5e-23 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 11443 TAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| ||| ||||||||| | | |||||||| |||||||||||||||||||||| Sbjct 207176 TAAAAAATAAAACATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACG 207117 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 ||||||| |||||||||||||||||||| |||| Sbjct 207116 ACGCTCTAACCAACTGAGCTAATGGGCCCTCGA 207084 >seq148 Length=1072752 Score = 120 bits (132), Expect = 2e-22 Identities = 82/92 (89%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| ||| ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 61300 AAAAAATAAAAGATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGA 61241 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||| |||||||||||||||||||||| || Sbjct 61240 CGCTCTAACCAACTGAGCTAATGGGCCGTTGA 61209 >seq53 Length=1359522 Score = 118 bits (130), Expect = 6e-22 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 11437 AATTAATAAAAAAT-CAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||| |||||||| |||| ||||||||| | | |||||||| |||||||||||||||| Sbjct 125242 AATCAATAAAAATGACAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATT 125301 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 125302 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 125335 >seq798 Length=50783 Score = 116 bits (128), Expect = 2e-21 Identities = 83/94 (88%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT-CGCGTTATTAGCA 11499 || ||||||| |||||||||||| | | |||||||| ||||||| ||||||||||||| Sbjct 44894 AAAAAAAAAT--AATTGGCCCATGCAGGTTTCGAACCTGCGACCTTGCGCGTTATTAGCA 44951 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 ||||||||| |||||||||||||||||||| ||| Sbjct 44952 CGACGCTCTAACCAACTGAGCTAATGGGCCTTCG 44985 >seq149 Length=1704810 Score = 116 bits (128), Expect = 2e-21 Identities = 74/81 (91%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 904564 AATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 904505 Query 11513 AACTGAGCTAATGGGCCGTCG 11533 ||||||||||||||||| ||| Sbjct 904504 AACTGAGCTAATGGGCCTTCG 904484 >seq2125 Length=2004 Score = 114 bits (126), Expect = 7e-21 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 1260 AAAAAAAAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 1319 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 1320 CTCTAACCAACTGAGCTAATGGGCC 1344 >seq534 Length=640355 Score = 114 bits (126), Expect = 7e-21 Identities = 79/89 (89%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||| |||| ||| ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 213447 AATACAAAA--AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCAC 213390 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 213389 GACGCTCTAACCAACTGAGCTAATGGGCC 213361 >seq386 Length=1112634 Score = 113 bits (124), Expect = 2e-20 Identities = 78/89 (88%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||||| ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 506097 AATAAAAAATA----TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCAC 506042 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 506041 GACGCTCTAACCAACTGAGCTAATGGGCC 506013 >seq327 Length=402942 Score = 113 bits (124), Expect = 2e-20 Identities = 79/90 (88%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11443 TAAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||| | |||| ||||||||| | | |||||||| |||||||||||||||||||| Sbjct 44337 TAAAAAGTAAAATAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCA 44278 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 44277 CGACGCTCTAACCAACTGAGCTAATGGGCC 44248 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 156292 AAAGTGGCCTATACAGGGATCGAACCTATGACCTTCGCGTTATTAGCACGACGCTCTAAC 156233 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 156232 CAACTGAGCTAATAGGCC 156215 >seq375 Length=388357 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 74200 AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 74259 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 74260 CAACTGAGCTAATGGGCC 74277 >seq209 Length=1542295 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 1013596 AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 1013655 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 1013656 CAACTGAGCTAATGGGCC 1013673 >seq140 Length=1024829 Score = 111 bits (122), Expect = 8e-20 Identities = 88/104 (85%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 11430 AATATAGAATT-AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||||| ||| ||||||||| ||| |||| || | ||||||||||| |||||||| Sbjct 526407 AATATAAAATCCAATAAAAAAAGGAAT-GGCCTATACAGGGATCGAACCTGTGACCTTCG 526349 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||||||||||||||| ||||||||||||||| |||| || Sbjct 526348 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATC 526305 Score = 109 bits (120), Expect = 3e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||| ||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct 461364 AAAAAAAGAAAATGGCCTATACAGGGATCGAACCTATGACCTTCGCGTTATTAGCACGAC 461423 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||| ||||||||||||||| |||| || Sbjct 461424 GCTCTAACCAACTGAGCTAATAGGCCATC 461452 Score = 107 bits (118), Expect = 1e-18 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||| | |||| ||| ||||| || | ||||||||||| ||||||||||||||||||| Sbjct 464325 TAACATAAAAAGAAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCA 464384 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||||||| ||||||||||||||| |||| || Sbjct 464385 CGACGCTCTAACCAACTGAGCTAATAGGCCATC 464417 >seq119 Length=516955 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 323812 AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 323871 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 323872 CAACTGAGCTAATGGGCC 323889 >seq6577 Length=31737 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 16560 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 16501 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 16500 TGAGCTAATGGGCC 16487 >seq488 Length=1075122 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 932345 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 932404 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 932405 TGAGCTAATGGGCC 932418 >seq477 Length=1203188 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 264196 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 264137 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 264136 TGAGCTAATGGGCC 264123 >seq127 Length=1358402 Score = 109 bits (120), Expect = 3e-19 Identities = 90/107 (84%), Gaps = 5/107 (5%) Strand=Plus/Minus Query 11429 AAATATAGAATT-AAT--AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCT 11485 ||||||| ||| ||| ||||||| || ||||| || | ||||||||||| ||||| Sbjct 857603 AAATATAAAATCCAATTAAAAAAATGAA--TGGCCTATACAGGGATCGAACCTGTGACCT 857546 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||||||||||||||||||||| ||||||||||||||| |||| || Sbjct 857545 TCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATC 857499 Score = 107 bits (118), Expect = 1e-18 Identities = 81/95 (85%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||||| | |||| |||| |||| || | ||||||||||| ||||||||||||||||| Sbjct 770192 ATTAAAATAAAAAGAAAT-GGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAG 770250 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||||||||| ||||||||||||||| |||| || Sbjct 770251 CACGACGCTCTAACCAACTGAGCTAATAGGCCATC 770285 Score = 104 bits (114), Expect = 1e-17 Identities = 78/91 (86%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 11440 TAATAAAAAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| |||||| | || ||||| || | ||||||||||| |||||||||||||||||| Sbjct 774721 TAACAAAAAAAGAGAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGC 774780 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| ||||||||||||||| |||| Sbjct 774781 ACGACGCTCTAACCAACTGAGCTAATAGGCC 774811 >seq342 Length=420309 Score = 105 bits (116), Expect = 3e-18 Identities = 77/89 (87%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||| |||| ||| ||||| || | ||||||||||| |||||||||||||||||||| Sbjct 118633 AATATAAAA--AAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCAC 118576 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 118575 GACGCTCTAACCAACTGAGCTAATAGGCC 118547 >seq221 Length=878532 Score = 104 bits (114), Expect = 1e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCT 11508 || ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| Sbjct 362267 ATAAAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCT 362208 Query 11509 RACCAACTGAGCTAATGGGCC 11529 ||||||||||||||| |||| Sbjct 362207 AACCAACTGAGCTAATAGGCC 362187 >seq6950 Length=4234 Score = 102 bits (112), Expect = 4e-17 Identities = 80/95 (84%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 11436 GAATTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||| |||| || ||| |||| || | ||||||||||| |||||||||||||| Sbjct 560 GAATTATGAAAAGATAAAAAATGGCATATACAGGGATCGAACCTGTGACCTTCGCGTTAT 501 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| ||||||||||||||| |||| Sbjct 500 TAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 466 >seq5669 Length=8006 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 7809 AAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 7750 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 7749 CAACTGAGCTAATAGGCC 7732 >seq423 Length=136951 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 83261 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 83320 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 83321 CAACTGAGCTAATAGGCC 83338 >seq377 Length=1720932 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 1501822 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 1501763 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 1501762 CAACTGAGCTAATAGGCC 1501745 Score = 102 bits (112), Expect = 4e-17 Identities = 84/102 (82%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 ||| | |||| || |||||| ||| ||||| || | ||||||||||| ||||||| Sbjct 1502007 AAAAAGAGAAAGAAACAAAAATGAAAAATGGCCTATACAGGGATCGAACCTGTGACCTTC 1501948 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| |||| |||||||||| |||| Sbjct 1501947 GCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 1501906 >seq187 Length=905850 Score = 102 bits (112), Expect = 4e-17 Identities = 80/95 (84%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 11436 GAATTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||| |||| || ||| |||| || | ||||||||||| |||||||||||||| Sbjct 404614 GAATTATGAAAAGATAAAAAATGGCATATACAGGGATCGAACCTGTGACCTTCGCGTTAT 404555 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| ||||||||||||||| |||| Sbjct 404554 TAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 404520 >seq180 Length=4117863 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 255999 AAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 256058 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 256059 CAACTGAGCTAATAGGCC 256076 >seq178 Length=182068 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 181871 AAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 181812 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 181811 CAACTGAGCTAATAGGCC 181794 >seq16 Length=3002559 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || |||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 2052083 AACTTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 2052024 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 2052023 CAACTGAGCTAATAGGCC 2052006 Score = 96.9 bits (106), Expect = 2e-15 Identities = 72/84 (86%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||| ||||| || | ||||||||||| |||||||||||||||||||| Sbjct 2052253 AACAAAAAA--AAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCAC 2052196 Query 11501 GACGCTCTRACCAACTGAGCTAAT 11524 |||||||| |||| |||||||||| Sbjct 2052195 GACGCTCTAACCAGCTGAGCTAAT 2052172 >seq7 Length=486845 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 358549 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 358608 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 358609 CAACTGAGCTAATAGGCC 358626 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261465111840136