Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6139 123 2e-23 seq177 123 2e-23 seq99 123 2e-23 seq240 98.7 8e-16 seq454 93.3 3e-14 seq244 87.8 1e-12 seq82 86.0 5e-12 seq280 84.2 2e-11 seq69 84.2 2e-11 seq61 84.2 2e-11 seq60 84.2 2e-11 >seq6139 Length=4094 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || ||||||||||| ||||||||||| ||| Sbjct 96 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 155 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || |||||||||| || || || ||| | || | || ||| |||||| || Sbjct 156 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 215 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || || |||||| | | | | ||||| |||| Sbjct 216 ATACCCTCTTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAACTCTCCA 273 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||| || || ||||||| ||| |||||||| || ||||| Sbjct 274 CCTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 322 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || ||||| || || | ||| || ||||||||||| || |||||||| ||||| Sbjct 324 CCTCCACGAAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCA 383 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || ||||||| | ||| || || || | || | || ||| |||||| ||| Sbjct 384 AGGGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 443 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || ||| || || | | | | ||||| |||| Sbjct 444 ATACCCTCCTTGTCTTGGATCTTGGCT--TTAACGTTGTCGATGGTGTCAGAACTCTCCA 501 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || || || |||||||| || |||||||| ||||||||||| Sbjct 502 CCTCGAGAGTAATCGTCTTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 550 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||||| ||||| || ||||||||||| ||| Sbjct 552 CCACCACGGAGCCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 611 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | |||||||| || || || || | ||||||| ||| || ||| || Sbjct 612 AAGGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGA 671 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 672 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTAACGTTGTCGATTGTGTCAGAGCTTTCCA 729 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || |||||||| || || || || || |||||||| Sbjct 730 CCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 778 >seq177 Length=445524 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || ||||| || || | ||| || ||||||||||| || |||||||| ||||| Sbjct 392235 CCTCCACGAAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCA 392176 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || ||||||| | ||| || || || | || | || ||| |||||| ||| Sbjct 392175 AGGGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 392116 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || ||| || | | | | ||||| |||| Sbjct 392115 ATACCCTCCTTGTCTTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCAGAACTCTCCA 392058 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||| || |||||||| || |||||||| ||||||||||| Sbjct 392057 CCTCCAAGGTGATAGTCTTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 392009 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||||| ||||| || ||||||||||| ||| Sbjct 392007 CCACCACGGAGCCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 391948 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | ||| || || || | ||||||| ||| || || || Sbjct 391947 AAGGTACGGCCATCCTCGAGTTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCGGGGGGA 391888 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 391887 ATGCCCTCCTTGTCTTGGATCTTGGC--CTTGACGTTGTCGATTGTGTCAGAGCTTTCCA 391830 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || |||||||| || || || || || |||||||| Sbjct 391829 CCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 391781 >seq99 Length=1465915 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || ||||||||||| ||||||||||| ||| Sbjct 434382 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 434441 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || |||||||||| || || || ||| | || | || ||| |||||| || Sbjct 434442 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 434501 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || || |||||| | | | | ||||| |||| Sbjct 434502 ATACCCTCTTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAACTCTCCA 434559 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||| || || ||||||| ||| |||||||| || ||||| Sbjct 434560 CCTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 434608 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || ||||| || || | ||| || ||||||||||| || |||||||| ||||| Sbjct 434610 CCTCCACGAAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCA 434669 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || ||||||| | ||| || || || | || | || ||| |||||| ||| Sbjct 434670 AGGGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 434729 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || ||| || || | | | | ||||| |||| Sbjct 434730 ATACCCTCCTTGTCTTGGATCTTGGCT--TTAACGTTGTCGATGGTGTCAGAACTCTCCA 434787 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || || || |||||||| || |||||||| ||||||||||| Sbjct 434788 CCTCGAGAGTAATCGTCTTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 434836 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||||| ||||| || ||||||||||| ||| Sbjct 434838 CCACCACGGAGCCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 434897 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | |||||||| || || || || | ||||||| ||| || ||| || Sbjct 434898 AAGGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGA 434957 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 434958 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTAACGTTGTCGATTGTGTCAGAGCTTTCCA 435015 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || |||||||| || || || || || |||||||| Sbjct 435016 CCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 435064 >seq240 Length=230833 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| ||| ||||| ||||| || || |||||||||||||| Sbjct 111266 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 111207 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| |||| ||||| || || | || |||||||| |||||| || Sbjct 111206 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGG 111147 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || |||||| ||||| | | | | ||||| | ||| Sbjct 111146 ATCCCTTCCTTGTCTTGGATCTTTGCT--TTCACATTGTCGATCGTGTCTGATGACTCTA 111089 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||| || || || || || | ||||| ||||| ||||||||||| Sbjct 111088 CCTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 111037 >seq454 Length=111167 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||| ||||| || ||||||||||| |||| || ||||| Sbjct 50128 AGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCC 50187 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | || || ||||| |||||| ||| | ||| || || || Sbjct 50188 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 50247 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | |||||| | ||| || | |||||||| Sbjct 50248 TGGATCTTGGC--CTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGG 50305 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||| ||| || |||||||||||||| Sbjct 50306 TCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 50339 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | |||||| || |||||||| || ||||||||||| ||| Sbjct 50797 CCACCACGGAGCCTGAGAACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 50856 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || ||||||| | ||| || || || | || | | ||| |||||| || Sbjct 50857 AAAGTCCTGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGGGGG 50916 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || ||| || | | | | ||||| |||| Sbjct 50917 ATTCCCTCCTTGTCCTGGATCTTGGC--CTTAACGTTGTCGATGGTGTCAGAACTCTCCA 50974 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || |||||||||||||| || || || || ||||| Sbjct 50975 CCTCCAAAGTGATAGTCTTTCCGGTCAGCGTCTTCACGAAGATTTGCAT 51023 >seq244 Length=507168 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || |||||||| || ||||||||||| ||| Sbjct 236134 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCC 236193 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| | |||||||| || | || |||| ||| |||||| ||| Sbjct 236194 AATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 236253 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || |||||| | | | ||||| | ||| Sbjct 236254 ATTCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTATCAATGGTGTCTGAGCTCTCAA 236311 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||| || || || ||||| || || ||||| ||||||||||| Sbjct 236312 CCTCCAAGGTTATTGTCTTGCCGGTGAGAGTCTTGACGAAAATCTGCAT 236360 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||| ||||| || ||||||||||| |||| || ||||| Sbjct 235921 AGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCC 235980 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | || || ||||| |||||| ||| | ||| || || || Sbjct 235981 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 236040 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | |||||| | ||| || | |||||||| Sbjct 236041 TGGATCTTGGC--CTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGG 236098 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || || ||||| |||||||| Sbjct 236099 TCTTCCCGGTGAGAGTCTTAACAAAGATCTGCAT 236132 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||||| ||||| || ||||||||||| ||| Sbjct 236818 CCACCACGAAGCCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCC 236877 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | || || || ||| | ||||||| || || ||| ||| Sbjct 236878 AAGGTACGGCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGG 236937 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || ||| || | | | | ||||| | ||| Sbjct 236938 ATACCTTCCTTGTCCTGGATCTTGGC--CTTAACGTTGTCGATTGTGTCAGAGCTTTCCA 236995 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| ||||| ||||| || || || ||||| |||||||| Sbjct 236996 CCTCGAGGGTGATAGTTTTCCCGGTGAGAGTCTTAACAAAGATCTGCAT 237044 >seq82 Length=470516 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| || ||||||||||| || |||||||| || | || | |||| || | || Sbjct 87898 TGCAGGGTCGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGC 87957 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 |||||||| | ||||||| ||| |||||| || | |||||||| || || || Sbjct 87958 TTGCCCGCGAATATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTG 88017 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | ||||| | ||| || | |||||||||||| || | Sbjct 88018 GCT--TTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTTTTGCCAG 88075 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || ||||| |||||||| Sbjct 88076 TCAAAGTCTTCACAAAGATCTGCAT 88100 >seq280 Length=1980472 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| ||| || || ||||| || || |||||||||||||| Sbjct 1633037 CCTCCTCTCAGACGGAGCACCAAATGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGGCG 1632978 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| |||| ||||| || || | || || ||||| |||||| || Sbjct 1632977 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 1632918 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || ||| ||||| | | | | ||||| | ||| Sbjct 1632917 ATCCCTTCCTTGTCTTGGATCTTCGCT--TTCACATTGTCGATCGTGTCTGATGACTCTA 1632860 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||| || || || || || | ||||| ||||| ||||||||||| Sbjct 1632859 CCTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 1632808 >seq69 Length=1777342 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| ||||| || ||||| || |||||||||||||||| || | |||| Sbjct 335996 AGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCT 336055 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || || || | || | |||||| |||||| || | || || ||||| Sbjct 336056 TCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCT 336115 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | | ||||| | |||| || | ||| |||| Sbjct 336116 TGGATCTTCGCT--TTCACATTGTCGATCGTGTCTGACGACTCCACCTCTAGGGTTATGG 336173 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || ||||| || || |||||||| || Sbjct 336174 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 336210 >seq61 Length=1440766 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | || || || ||||||||||| || |||||||| || | || | |||| Sbjct 1073867 AGTACAAGGTGAAGGGTCGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCT 1073808 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || |||||||| | ||||||| ||| |||||| || | |||||||| || Sbjct 1073807 TCAAGCTGCTTGCCCGCGAATATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCT 1073748 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | | ||||| | ||| || | |||||||| Sbjct 1073747 TGGATCTTGGCT--TTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGG 1073690 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||| || || ||||| |||||||| Sbjct 1073689 TTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 1073656 >seq60 Length=318476 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || |||||||| || || || |||||||| || | || | ||| Sbjct 55865 AGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCTAGTGTGCGACCATCC 55924 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || |||||||| || ||| | ||||| | ||| || ||| || | |||||||| || Sbjct 55925 TCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGGATTCCCTCTTTATCC 55984 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | |||||| ||| || | |||||||| Sbjct 55985 TGGATCTTAGC--CTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGGGTGATGG 56042 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||| ||| || ||||| |||||||| Sbjct 56043 TTTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 56076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405047585636140