Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq60 125 5e-24 seq233 111 1e-19 seq134 109 4e-19 seq82 102 5e-17 seq7920 93.3 3e-14 seq280 91.5 1e-13 seq267 91.5 1e-13 seq240 91.5 1e-13 seq411 89.7 3e-13 seq384 89.7 3e-13 seq61 89.7 3e-13 seq325 87.8 1e-12 seq380 86.0 4e-12 seq69 86.0 4e-12 seq244 84.2 1e-11 seq190 82.4 5e-11 >seq60 Length=318476 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | ||| | ||||||||| |||||| ||| || || |||||||| |||| Sbjct 55848 TACCACCTCTGAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAG 55907 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || | || ||||||||||| |||||||| || || | || ||||| | | Sbjct 55908 CTAGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTG 55967 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || ||||| ||| || || ||| ||||| | | ||| ||| ||| |||| Sbjct 55968 GGATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAA 56027 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || ||||| || ||||| || ||||| || |||||||| Sbjct 56028 CCTCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 56076 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||| | ||| || || ||||||||| ||||||||||||| Sbjct 55620 TACCACCACGAAGACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATATTGTAATCAG 55679 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | |||| | || || | || || || ||||| || || | || || || | | Sbjct 55680 CAAGGGTACGTCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTG 55739 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| ||| || ||| ||||| | || || || || |||| Sbjct 55740 GGATCCCTTCCTTGTCCTGAATCTTCGCCTTGACATTATCGATTGTGTCAGAGCTCTCAA 55799 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| || || || || | ||| |||||||| |||||||| Sbjct 55800 CCTCCAAAGTAATGGTCTTTCCAGTTAGGGTCTTCACGAAAATCTGCAT 55848 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | || | ||||||||||| || ||| || || || |||||||| | Sbjct 56076 TACCACCTCTTAGCCGGAGAACCAAATGAAGGGTTGACTCTTTCTGGATGTTGTAATCTG 56135 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || |||| ||||| || || || || | | ||| ||||| | | Sbjct 56136 CCAAGGTACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAG 56195 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| |||||| || || ||| ||||| | || || || || |||| Sbjct 56196 GAATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTCTCAA 56255 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | ||||||||||| || ||||| Sbjct 56256 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 56304 >seq233 Length=166549 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || | | ||||| || ||||| ||||| || ||||||||||| | Sbjct 103548 TACCACCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTCTGGATATTGTAATCCG 103489 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| |||| | || || | ||||| |||||||| || | | ||| ||||| | | Sbjct 103488 CCAAGGTACGTCCATCCTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAG 103429 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| ||| ||| ||| ||||| | || ||| || || || | Sbjct 103428 GGATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATAGTGTCAGAGCTCTCTA 103369 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||| || || || || | ||||||||||| || ||||| Sbjct 103368 CCTCAAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 103320 >seq134 Length=106205 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | ||||| || ||||| ||||||||||| |||||||||| Sbjct 48004 ACCACCACGAAGACGAAGAACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAATCAGC 48063 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| || |||| || | ||||| || ||||| || || | || || || | || Sbjct 48064 CAAAGTCCGACCGTCCTCGAGCTGTTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGG 48123 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || ||||||||| ||| || ||| || || | | || ||| || ||||| Sbjct 48124 GATCCCCTCTTTGTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAAC 48183 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || |||||||| || || ||||| |||||||| || || ||||| Sbjct 48184 ATCCAAGGTAATAGTCTTCCCTGTCAATGTTTTCACAAAGATTTGCAT 48231 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||||||| | |||||||| || ||||| ||||||||||| | Sbjct 48231 TACCACCACGAAGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATATTGTAATCCG 48290 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || | || || | ||||| || || || || || || || || || | | Sbjct 48291 CAAGTGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCGCTGCTGGTCTGGTG 48350 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || || ||| ||| || || ||||| | || || ||| ||| |||| Sbjct 48351 GGATCCCCTCCTTATCCTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCAA 48410 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| || || || || || || | ||| ||||| || |||||||| Sbjct 48411 CCTCTAAAGTTATGGTCTTCCCTGTGAGGGTCTTCACAAAAATCTGCAT 48459 >seq82 Length=470516 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| ||| | ||||||||| || ||| ||| || || || |||||||| | Sbjct 87644 TACCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGG 87703 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| || | || |||| || || |||||||| || || | || ||||| | | Sbjct 87704 CCAAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTG 87763 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||| || || || || ||||| | | |||||| || |||| Sbjct 87764 GAATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAA 87823 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||| || || ||||||||||| | || ||||| || |||||||| Sbjct 87824 CCTCTAGGGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATCTGCAT 87872 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| ||||| | |||||||| || ||| ||| || || || |||||||| | Sbjct 88100 TACCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGG 88159 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| || | || || | ||||| ||||| || || | | ||| || || | | Sbjct 88160 CCAAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAG 88219 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| |||||| || ||| ||| ||||| | || || || || || | Sbjct 88220 GAATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCGA 88279 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || ||||| || | ||||||||||| || ||||| Sbjct 88280 CCTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 88328 >seq7920 Length=1314 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||| |||| |||||||||||||||||||||||| | Sbjct 377 CTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTC 436 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 437 GCCCGTATTTAGCCTT 452 >seq280 Length=1980472 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||| ||||||| ||| | ||||||||||||||| ||| || || || ||||| || | Sbjct 1633038 ACCTCCTCTCAGACGGAGCACCAAATGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGGC 1632979 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | |||| || | ||||| ||||| || || || || || || || | || Sbjct 1632978 GAGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 1632919 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||| ||||| || || |||||||| | || || ||| || || Sbjct 1632918 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 1632859 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322 |||| || || || || ||||| ||||||||||| || |||||||| |||| Sbjct 1632858 CTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTTTT 1632806 >seq267 Length=1500311 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 |||||||| || || || ||||||||||| | ||| || | || || | |||| Sbjct 617528 TGAAGAGTTGATTCTTTCTGGATATTGTAATCTGCTAAAGTGCGACCATCTTCGAGTTGT 617587 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 ||||||||||| || || | ||||| || | | || ||||||||||| ||| || Sbjct 617588 TTTCCGGCAAAGATAAGTCTCTGTTGGTCCGGTGTGATCCCTTCTTTGTCTTGAATCTTG 617647 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 |||||| || | | ||||| || || || |||| || || ||||| |||||| Sbjct 617648 GCCTTCACGTTATCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTTTTGCCCGTC 617707 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 || || || || || |||||||| Sbjct 617708 AAAGTCTTGACAAAAATCTGCAT 617730 >seq240 Length=230833 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||| ||||||| ||| | |||||||||||| || ||| || || || ||||| || | Sbjct 111267 ACCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGC 111208 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | |||| || | ||||| ||||| || || || || || || || | || Sbjct 111207 GAGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGG 111148 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||| ||||| || ||| |||||||| | || || ||| || || Sbjct 111147 GATCCCTTCCTTGTCTTGGATCTTTGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 111088 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322 |||| || || || || ||||| ||||||||||| || |||||||| |||| Sbjct 111087 CTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTTTT 111035 >seq411 Length=621170 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||||||| | ||||| || |||||||| ||||||||||| | Sbjct 569444 TACCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTTTGGATATTGTAATCCG 569385 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || | || || | ||||| || ||||| || || | ||||| || | | Sbjct 569384 CTAGCGTGCGACCATCCTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTG 569325 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| ||| || || || || | | || ||| || |||| Sbjct 569324 GGATCCCTTCCTTGTCCTGAATCTTAGCTTTGACGTTATCAATTGTGTCTGAGCTCTCAA 569265 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || || ||||| || || ||||| || ||||| || || ||||| Sbjct 569264 CTTCCAAGGTGATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 569216 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||| | ||| || || ||||||||| ||||||||||| | Sbjct 568988 TACCACCACGAAGACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATATTGTAATCCG 568929 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | |||| | || || | || || || ||||| || || | || || || | | Sbjct 568928 CAAGGGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGCG 568869 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| ||| || ||| ||||| | || || || || |||| Sbjct 568868 GGATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTATCGATTGTGTCAGAGCTCTCAA 568809 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || || | ||| || ||||| |||||||| Sbjct 568808 CCTCCAAAGTGATGGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 568760 >seq384 Length=798633 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| ||| | ||||| || ||||||||| ||||||||||| | Sbjct 647002 CCACCACGAAGACGCAGCACAAGGTGAAGGGTTGACTCCTTTTGGATATTGTAATCTGCA 646943 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | ||||| || || || || || | |||||| || | | | Sbjct 646942 AGAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGCG 646883 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| ||||| || ||| |||||| || | || ||||| || |||||| Sbjct 646882 ATCCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTATTGATCGTATCAGAGCTCTCAACT 646823 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || || || | ||| || || || |||||||| Sbjct 646822 TCCAAAGTTATAGTCTTTCCGGTAAGGGTCTTGACAAAAATCTGCAT 646776 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||| || | || | ||||| || || || || || |||||||| || Sbjct 646546 CCACCTCTCAGTCGAAGTACAAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCTGAA 646487 Query 38151 AAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 | |||||| || || | ||||| || || || ||||| | |||||||| | Sbjct 646486 AG----CGTTCGACCATCCTCAAGCTGTTTGCCAGCGAAGATTAGTCTCTGTTGATCCGG 646431 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 |||| ||||| ||||| || || || ||||| | | || ||| ||| || Sbjct 646430 AGGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCAATTGTGTCTGAACTCTC 646371 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| ||||| |||||||| || | ||| || |||||||||||||| Sbjct 646370 GACTTCTAGGGTAATGGTTTTACCGGTAAGGGTCTTGACGAATATCTGCAT 646320 >seq61 Length=1440766 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| ||||| | |||||||| || ||| ||| || || || |||||||| | Sbjct 1073656 TACCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGG 1073597 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| || | || || | ||||| ||||| || || | | ||| || || | | Sbjct 1073596 CCAAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAG 1073537 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| ||||| || ||| ||| ||||| | || || || || || | Sbjct 1073536 GAATGCCTTCCCTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCGA 1073477 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || ||||| || | ||||||||||| || ||||| Sbjct 1073476 CCTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 1073428 >seq325 Length=1091643 Score = 87.8 bits (96), Expect = 1e-12 Identities = 145/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG----TCGTCTAA 38170 |||||||| ||| || || ||||||||||| | ||| ||||| || || | Sbjct 552726 TGAAGAGTCGACTCTTTCTGGATATTGTAATCGG-CAAGT---GTTCGACCATCTTCGAG 552671 Query 38171 TTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAAT 38230 |||||| |||||||| ||||| | || || || | | || ||||||||||| ||| Sbjct 552670 TTGTTTCCCGGCAAAGATTAGTCTCTGCTGGTCCGGTGTGATCCCTTCTTTGTCTTGAAT 552611 Query 38231 TTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACC 38290 || |||||| || | | ||||| || || ||||||| || || ||||| || Sbjct 552610 CTTGGCCTTCACGTTATCAATCGTATCAGAGCTCTCGACTTCTAGAGTGATGGTTTTGCC 552551 Query 38291 CGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| || || || || |||||||| Sbjct 552550 CGTCAAAGTCTTGACAAAAATCTGCAT 552524 >seq380 Length=167695 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | ||||| |||||| || ||||| || || ||||| || | Sbjct 104816 ACCACCACGGAGACGGAGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCCGC 104875 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | || |||| || | || || ||||| ||||| | || || || || | || Sbjct 104876 CAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGG 104935 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCT--CCACTTTCA 38267 || ||||| ||||| || || |||||||| | || || ||| | ||| | Sbjct 104936 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACT--CG 104993 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322 || |||| || || || || ||||| | |||||||||||| |||||||| |||| Sbjct 104994 ACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTT 105048 >seq69 Length=1777342 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | ||||| |||||| || ||||| || || ||||| || | Sbjct 335980 ACCACCACGGAGACGGAGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGC 336039 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | || |||| || | || || ||||| ||||| | || || || || | || Sbjct 336040 CAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGG 336099 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCT--CCACTTTCA 38267 || ||||| ||||| || || |||||||| | || || ||| | ||| | Sbjct 336100 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACT--CC 336157 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322 || |||| || || || || ||||| | |||||||||||| |||||||| |||| Sbjct 336158 ACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTT 336212 >seq244 Length=507168 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || || ||| ||||| ||||| ||||| |||| ||| ||| | || || Sbjct 236836 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCTTCG 236895 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | || ||||||||||| || || | ||| ||||| | |||| ||||| |||||| Sbjct 236896 AGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGG 236955 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || || | || || || ||||| || || | || |||||||| Sbjct 236956 ATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTTTTC 237015 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || || || || |||||||| Sbjct 237016 CCGGTGAGAGTCTTAACAAAGATCTGCAT 237044 >seq190 Length=891836 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||| | || | || | ||||| || || || || || |||||||| || Sbjct 382178 CCACCTCTTAGTCGAAGTACAAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCTGAA 382119 Query 38151 AAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 | |||||| || || | ||||| || || || ||||| | |||||||| | Sbjct 382118 AG----CGTTCGACCTTCCTCAAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGG 382063 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 |||| ||||| ||||| || || || ||||| | | || ||| ||| || Sbjct 382062 AGGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCAATTGTGTCTGAACTCTC 382003 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| ||||| |||||||| || | ||| || |||||||||||||| Sbjct 382002 GACTTCTAGGGTAATGGTTTTACCGGTAAGGGTCTTGACGAATATCTGCAT 381952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334913783364566