Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_010355.1 Length=62337 Score E Sequences producing significant alignments: (Bits) Value seq4050 91.5 6e-14 >seq4050 Length=1194 Score = 91.5 bits (100), Expect = 6e-14 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 6467 CCTTCGTCGAAAGAATAGAACGACTTGAGGAGGAAAAGAGCGGTCTCCAGGAGGACATCA 6526 || || |||| | || ||||| || ||||| ||||||| || || ||||||| Sbjct 698 CCATCATCGAGCGCATCGAACGGCTCGAGGAAGAAAAGAAAACCATCAGCGACGACATCA 639 Query 6527 AGGAAGTCTACTCGGAAGCCAAGGGCACCGGGTTCGACGTCAAGATCATTCGGCAGATCA 6586 |||| | |||| || |||||||||| ||| || ||||||||| | | || |||| Sbjct 638 AGGACGGCTACGGCGAGGCCAAGGGCAACGGCTTTGACGTCAAGGTGCTGCGCACCATCA 579 Query 6587 TCCGCTTGCGGAAGATGGACAAGGCCGACCGGCAGGAACAGCGCGCCATCCTCGAAATGT 6646 | ||| |||| ||| |||| | ||| || ||||| ||| ||||||| |||| | Sbjct 578 TTCGCATGCGCAAGCAGGACGCCGACGAGCGTCAGGAGCAGGAAACCATCCTGGAAACCT 519 Query 6647 ACGAGGAAGCGCTCGGGATG 6666 || | | ||||| |||||| Sbjct 518 ACATGCAGGCGCTGGGGATG 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199333711114308