Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq240 104 2e-17 seq6139 102 8e-17 seq280 102 8e-17 seq99 102 8e-17 seq525 100 3e-16 seq270 100 3e-16 seq82 98.7 1e-15 seq325 95.1 1e-14 seq267 95.1 1e-14 seq69 93.3 4e-14 seq61 93.3 4e-14 seq244 91.5 1e-13 seq454 89.7 5e-13 seq177 86.0 6e-12 seq380 84.2 2e-11 seq60 84.2 2e-11 seq134 82.4 8e-11 >seq240 Length=230833 Score = 104 bits (114), Expect = 2e-17 Identities = 165/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 138383 CGCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGT 138442 |||| || |||| || ||| | || ||||| | | ||||| || || |||||||||| Sbjct 111270 CGCA-CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGT 111212 Query 138443 CGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCG 138502 || | || | | ||| || || ||||| |||| |||| || ||||| ||||||| Sbjct 111211 CGGCGAGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCG 111152 Query 138503 GAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGAC 138561 | || || ||||| ||||| ||| ||| ||| | |||| || | ||||| | ||| Sbjct 111151 GTGGGATCCCTTCCTTGTCTTGGATCTTTGCTTTCACATTG-TCGATCGTGTCTGATGAC 111093 Query 138562 TCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| | || | ||| || || || | ||||| ||||| |||||||| Sbjct 111092 TCTACCTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCAT 111040 >seq6139 Length=4094 Score = 102 bits (112), Expect = 8e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || |||||||| ||| | || | |||||| Sbjct 341 AACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTC 400 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 |||||| || |||| |||| | | ||| ||||||||||| ||||| || ||||| | Sbjct 401 GAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTC-TT 459 Query 138525 GATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 | | || | ||||| ||| || | |||||| | ||||||||||| || | ||| Sbjct 460 GGATCTTGGCTTTAACGTTG-TCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTC 518 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || || ||||| || ||||||||||| Sbjct 519 TTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 550 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | | ||||||||||| ||||||||||| | Sbjct 96 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 155 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | |||||| | || || || | | |||| | | ||| |||||||| || Sbjct 156 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 215 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| |||||||| ||| || || | | || | |||||| | ||||||| Sbjct 216 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACC 275 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || ||||| || ||||| Sbjct 276 TCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 322 >seq280 Length=1980472 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || ||||| | | ||||| || || |||||||||||| Sbjct 1633037 CCTCCTCTCAGACGGAGCACCAAATGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGGCG 1632978 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | | ||| || || ||||| |||| |||| |||||||| |||||||| || Sbjct 1632977 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 1632918 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || ||| | |||| || | ||||| | ||||| || Sbjct 1632917 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTG-TCGATCGTGTCTGATGACTCTAC 1632859 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||| || || || | ||||| ||||| |||||||| Sbjct 1632858 CTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCAT 1632811 >seq99 Length=1465915 Score = 102 bits (112), Expect = 8e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || |||||||| ||| | || | |||||| Sbjct 434627 AACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTC 434686 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 |||||| || |||| |||| | | ||| ||||||||||| ||||| || ||||| | Sbjct 434687 GAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTC-TT 434745 Query 138525 GATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 | | || | ||||| ||| || | |||||| | ||||||||||| || | ||| Sbjct 434746 GGATCTTGGCTTTAACGTTG-TCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTC 434804 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || || ||||| || ||||||||||| Sbjct 434805 TTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 434836 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | | ||||||||||| ||||||||||| | Sbjct 434382 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 434441 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | |||||| | || || || | | |||| | | ||| |||||||| || Sbjct 434442 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 434501 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| |||||||| ||| || || | | || | |||||| | ||||||| Sbjct 434502 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACC 434561 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || ||||| || ||||| Sbjct 434562 TCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 434608 >seq525 Length=802623 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 20328 TTGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCCTCGAGCTGCTTTCCGG 20387 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | || | ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 20388 CGAAAATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCA 20447 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | |||||| | ||||| ||||||| || | ||| || || || || ||| Sbjct 20448 CATTG-TCGATGGTGTCAGATGACTCTACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTT 20506 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 20507 TTCACGAAGATCTGCAT 20523 >seq270 Length=1109440 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 20345 TTGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCCTCGAGCTGCTTTCCGG 20404 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | || | ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 20405 CGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCA 20464 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | |||||| | ||||| ||||||| || | ||| || || || || ||| Sbjct 20465 CATTG-TCGATGGTGTCAGATGACTCTACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTT 20523 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 20524 TTCACGAAGATCTGCAT 20540 >seq82 Length=470516 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | ||| ||||| | | | ||||| || || |||||||| ||| | Sbjct 88102 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 88161 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||||| |||| | | || ||||||||||| Sbjct 88162 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 88221 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| ||| || | |||| || | |||||| | ||| || Sbjct 88222 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTG-TCGATGGTGTCAGAGCTCTCGAC 88280 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || |||||||| || ||||| || ||||| ||||| Sbjct 88281 CTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 88328 >seq325 Length=1091643 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||| | | ||| || |||| |||||||||||||||| ||||| || Sbjct 551838 GCCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAATCCGC 551779 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| || || ||||| ||||| | | |||| || | ||| |||||||||| Sbjct 551778 CAAAGTACGACCATCTTCAAGTTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCCGGAGT 551719 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| || || ||| || || | |||| || | ||||| | || | Sbjct 551718 AATACCTTCCTTATCTTGGATCTTCGCCTTGACATTG-TCAATCGTGTCAGAGCTTTCAA 551660 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || ||||| || ||||| |||||||| Sbjct 551659 CCTCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCAT 551611 >seq267 Length=1500311 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| || |||| ||||||| || || |||||||| || | Sbjct 617959 GCCACCACGAAGACGAAGAACCAAGTGTAGTGTTGACTCTTTCTGGATGTTGTAATC-CG 618017 Query 138447 CATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 || ||| ||| || |||||||| || |||| | |||| || | ||| ||||||||| Sbjct 618018 CA-AGTGTCCGACCATCTTCGAGTTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGA 618076 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTC 138563 || || ||||| ||||| ||| || || | |||| || | ||||| | ||| Sbjct 618077 GGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG-TCTATTGTGTCTGAGCTCTC 618135 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| || | || | ||||| ||||| || ||||| ||||| || |||||| Sbjct 618136 CACTTCTAGAGTAATGGTTTTGCCAGTGAGGGTTTTCACAAATATTTGCATG 618187 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || | ||| | | |||||||||| || |||||||| || Sbjct 618187 GCCACCACGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 618246 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| |||||||||||||||||| | | | || || | ||| |||||||||| Sbjct 618247 CAAAGTACGACCGTCCTCGAGTTGTTTACCTGCAAAAATAAGTCTCTGCTGGTCCGGAGT 618306 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| || || | |||| || | ||||| | || | Sbjct 618307 GATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTG-TCAATCGTGTCAGAACTTTCGA 618365 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | || || || || || ||||| ||||| || |||||| Sbjct 618366 CCTCAAGAGTTATGGTCTTGCCCGTAAGGGTTTTAACAAAGATTTGCATG 618415 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||| | | ||| || |||| |||||||||| ||||| |||||||| Sbjct 618415 GCCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTCTGAATATTGTAGTCAGC 618474 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || ||||||||||| | |||| || | ||| |||||||||| Sbjct 618475 CAATGTACGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGTCTCTGCTGGTCCGGAGT 618534 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| || || | | || | |||||||| || || Sbjct 618535 GATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCAAC 618594 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || ||||| || ||||| |||||||| Sbjct 618595 CTCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCAT 618642 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCG 138477 |||| || || || || ||||| || ||| | ||| || || ||||||||||| ||| Sbjct 617535 TTGATTCTTTCTGGATATTGTAATCTGCTAA-AGTGCGACCATCTTCGAGTTGTTTTCCG 617593 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTT 138536 | | |||| || | |||||||||||| | || ||||||||||| ||| | || | || Sbjct 617594 GCAAAGATAAGTCTCTGTTGGTCCGGTGTGATCCCTTCTTTGTC-TTGAATCTTGGCCTT 617652 Query 138537 TAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | | || | || || | ||| ||||| | || | ||||| || |||| ||| Sbjct 617653 CACGTTATCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTTTTGCCCGTCAAAGT 617712 Query 138597 TTTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 617713 CTTGACAAAAATCTGCAT 617730 >seq69 Length=1777342 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| || ||| || ||| || || || || |||| Sbjct 336014 GATTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCG 336073 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||||| |||||||| || || ||||| ||||| ||| || ||| | | Sbjct 336074 AATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGGATCTTCGCTTTCACA 336133 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | |||||||||||| | || | || || || || || ||||| Sbjct 336134 TTG-TCGATCGTGTCTGACGACTCCACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 336192 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 336193 CACGAAGATCTGCAT 336207 >seq61 Length=1440766 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | ||| ||||| | | | ||||| || || |||||||| ||| | Sbjct 1073654 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 1073595 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||||| |||| | | || ||||||||||| Sbjct 1073594 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 1073535 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| |||| ||| ||| || | |||| || | |||||| | ||| || Sbjct 1073534 ATGCCTTCCCTGTCCTGGATCTTTGCCTTAACATTG-TCGATGGTGTCAGAGCTCTCGAC 1073476 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || |||||||| || ||||| || ||||| ||||| Sbjct 1073475 CTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 1073428 >seq244 Length=507168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| |||||||||||||| || ||||| || ||||| || || |||| | Sbjct 236851 GATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCTTCGAGCTGCTTTCCGGCA 236910 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | || || |||||||| |||||||| ||||| || | || | |||| Sbjct 236911 AAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTC-CTGGATCTTGGCCTTAAC 236969 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||||||| || | ||||| || || ||||| | Sbjct 236970 GTTG-TCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTTTTCCCGGTGAGAGTCT 237028 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 237029 TAACAAAGATCTGCAT 237044 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | || ||||| |||||||||||||| | Sbjct 235906 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 235965 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || || | |||| |||||||| ||||||||||| Sbjct 235966 AGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 236025 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | |||||||| ||| ||| Sbjct 236026 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACC 236085 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| || ||||| |||||||| Sbjct 236086 TCAAGGGTGATGGTCTTCCCGGTGAGAGTCTTAACAAAGATCTGCAT 236132 >seq454 Length=111167 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | || ||||| |||||||||||||| | Sbjct 50113 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 50172 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || || | |||| |||||||| ||||||||||| Sbjct 50173 AGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 50232 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | |||||||| ||| ||| Sbjct 50233 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACC 50292 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || |||||||||||||| Sbjct 50293 TCAAGGGTGATGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 50339 >seq177 Length=445524 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || |||||||| ||| | || | |||||| Sbjct 392218 AACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTC 392159 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 |||||| || |||| |||| | | ||| ||||||||||| ||||| || ||||| Sbjct 392158 GAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 392099 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 ||| || || | | || | |||||| | ||||||||| | || | || || Sbjct 392098 GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATAGTCTT 392039 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || ||||| || ||||||||||| Sbjct 392038 TCCGGTTAGGGTTTTGACGAAAATCTGCAT 392009 >seq380 Length=167695 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||||||||| || ||| || ||| || || || || |||| Sbjct 104850 GATTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCG 104909 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||||| |||||||| || || ||||| ||||| ||| || ||| | | Sbjct 104910 AATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGGATCTTCGCTTTCACA 104969 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | |||||| ||||| | || | || || || || || ||||| Sbjct 104970 TTG-TCGATCGTGTCTGACGACTCGACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 105028 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 105029 CACGAAGATCTGCAT 105043 >seq60 Length=318476 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | |||||||||| |||||||||||||| Sbjct 55394 CCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCTGCA 55453 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || ||||| || | |||| || | ||| ||||||||||| Sbjct 55454 AGGGTACGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 55513 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| | || | || | | || | ||||| | ||| || Sbjct 55514 ATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACGTTATCTATTGTGTCTGAGCTCTCAAC 55572 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||| ||||| || || || ||||| || ||||| Sbjct 55573 CTCCAGAGTAATGGTTTTTCCAGTAAGGGTCTTCACAAAGATTTGCAT 55620 Score = 82.4 bits (90), Expect = 8e-11 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || |||| | ||| | || ||||| | | ||||| || || || |||||||| ||| Sbjct 55850 CCACCTCTGAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCT 55909 Query 138447 CATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 ||| |||| ||||| | ||||||||||| | |||| || | ||| || ||||| Sbjct 55910 ---AGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGT 55966 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTC 138563 || || || ||||| || ||| || || | |||| || | ||||| | ||| Sbjct 55967 GGGATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTG-TCAATAGTGTCTGAACTCTC 56025 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | ||||| ||||||| || || ||||| |||||||| Sbjct 56026 AACCTCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 56076 >seq134 Length=106205 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/199 (71%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA--GTCCTCGAGTTGTTTACCGG 138478 ||||| |||||||||||||| || || ||| |||| ||||| | || ||||| | Sbjct 48950 GACTCTTTTTGAATGTTGTAATC-AGCA-AGTGTGCGACCATCCTCTAACTGCTTACCAG 49007 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| || |||||||| || ||||| ||||| ||| | || | |||| Sbjct 49008 CAAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTGTC-CTGAATCTTAGCTTTA 49066 Query 138539 --ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 |||| || | || || | ||| ||||| | || | ||||| ||||||| || Sbjct 49067 ACATTG-TCAATAGTATCAGAGCTCTCAACCTCCAAAGTAATGGTTTTGCCAGTCAATGT 49125 Query 138597 TTTTACAAAAATCTGCATG 138615 || ||||| ||||||||| Sbjct 49126 CTTCACAAAGATCTGCATG 49144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496211619949920