Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq69 134 2e-26 seq380 125 8e-24 seq525 118 1e-21 seq454 113 5e-20 seq280 113 5e-20 seq270 113 5e-20 seq240 107 2e-18 seq244 104 3e-17 seq6139 100 3e-16 seq99 100 3e-16 seq82 100 3e-16 seq61 100 3e-16 seq411 95.1 1e-14 seq325 93.3 5e-14 seq267 87.8 2e-12 seq134 87.8 2e-12 seq60 86.0 7e-12 seq233 82.4 9e-11 >seq69 Length=1777342 Score = 134 bits (148), Expect = 2e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||||||| | || ||||| ||||| |||||||||| |||||||| | Sbjct 335992 ACGGAGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCC 336051 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| |||||||||||||| ||||||||||| | || | | ||||| Sbjct 336052 GTCTTCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTT 336111 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||||| || | | | | |||||| ||| ||||| || | || || Sbjct 336112 GTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACTCCACCTCTAGGGTTAT 336171 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||| || ||||| || ||||| || ||||| ||||| || Sbjct 336172 GGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 336210 >seq380 Length=167695 Score = 125 bits (138), Expect = 8e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||||||| | || ||||| ||||| |||||||| | |||||||| | Sbjct 104828 ACGGAGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCC 104887 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| |||||||||||||| ||||||||||| | || | | ||||| Sbjct 104888 GTCTTCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTT 104947 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||||| || | | | | |||||| ||| || || || | || || Sbjct 104948 GTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACTCGACCTCTAGGGTTAT 105007 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||| || ||||| || ||||| || ||||| ||||| || Sbjct 105008 GGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 105046 >seq525 Length=802623 Score = 118 bits (130), Expect = 1e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || || || |||| ||||||||||| |||||||| Sbjct 20332 CTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 20391 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | ||| | | ||||||||| |||||| ||| | | Sbjct 20392 AATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 20451 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | ||||| || || ||||| || ||||| || Sbjct 20452 GTCGATGGTGTCAGATGACTCTACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 20511 Query 46582 AAAGATTTGCATTTT 46596 ||||| ||||| || Sbjct 20512 GAAGATCTGCATCTT 20526 >seq454 Length=111167 Score = 113 bits (124), Expect = 5e-20 Identities = 155/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| || |||||| ||||| |||||||| | | ||| | |||| ||| Sbjct 50815 ACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCTGCCGTCCTCG 50874 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| |||||||| ||||| | ||||||||| | || | | |||||||||| | Sbjct 50875 AGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 50934 Query 46505 ATCTTCTTCTTGAGCGTCGCC-ACCGTGTCG---CTCGATTCCACATCCACCGTGATGGT 46560 ||||| ||| | ||| | | | ||||| ||| ||||| |||| ||||| || Sbjct 50935 ATCTTGGCCTTAA-CGTTGTCGATGGTGTCAGAACTC---TCCACCTCCAAAGTGATAGT 50990 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||||||| || || ||||||||||| Sbjct 50991 CTTTCCGGTCAGCGTCTTCACGAAGATTTGCAT 51023 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || |||||||| | || ||||| |||| || |||||||| || ||||| Sbjct 50149 TCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAG 50208 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | || ||||| ||| |||||| ||| | ||| Sbjct 50209 ATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCA-CGTT 50267 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | ||||| |||| || || || | |||||||| || || |||| ||| || Sbjct 50268 GTCAATGGTGTCGGAGCTC---TCAACCTCAAGGGTGATGGTCTTCCCGGTCAACGTCTT 50324 Query 46579 AACAAAGATTTGCAT 46593 ||||| || ||||| Sbjct 50325 CACAAAAATCTGCAT 50339 >seq280 Length=1980472 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||| | ||||| ||| | || ||| || ||||| |||||||||| Sbjct 1633037 CCTCCTCTCAGACGGAGCACCAAATGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGGCG 1632978 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | |||| || ||||| || |||||||| |||| ||||||||||| | ||| Sbjct 1632977 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 1632918 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||| ||||||| || | | | | |||||| || || || Sbjct 1632917 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTACC 1632858 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | || || || || ||||| | ||||| |||||||| |||||||| Sbjct 1632857 TCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 1632808 >seq270 Length=1109440 Score = 113 bits (124), Expect = 5e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || || || |||| ||||||||||| |||||||| Sbjct 20349 CTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 20408 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | | ||||||||| |||||| ||| | | Sbjct 20409 AATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 20468 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | ||||| || || ||||| || ||||| || Sbjct 20469 GTCGATGGTGTCAGATGACTCTACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 20528 Query 46582 AAAGATTTGCATTTT 46596 ||||| ||||| || Sbjct 20529 GAAGATCTGCATCTT 20543 >seq240 Length=230833 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||| | ||||| ||| | || ||| || ||||| |||||||||| Sbjct 111266 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 111207 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | |||| || ||||| || |||||||| |||| ||||||||||| | || Sbjct 111206 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGG 111147 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||| |||||| | ||| | | | | | |||||| || || || Sbjct 111146 ATCCCTTCCTTGTCTTGGATCTT-TGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 111088 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | || || || || ||||| | ||||| |||||||| |||||||| Sbjct 111087 CTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 111037 >seq244 Length=507168 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | | ||| | |||| ||||| ||||| |||||||| Sbjct 236625 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCTGCCGTCCTCGAGTTGCTTTCCGGCGAA 236684 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | || | | |||||||||| |||||| ||| | ||| Sbjct 236685 GATCAACCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAA-CGT 236743 Query 46522 CGCC-ACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| ||| || || |||| ||||| || || || |||||||| | Sbjct 236744 TGTCGATGGTGTCAGAACTC---TCTACCTCCAAAGTGATAGTCTTTCCGGTCAGCGTCT 236800 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||||||||| Sbjct 236801 TGACGAAGATTTGCAT 236816 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || |||||||| | || ||||| |||| || |||||||| || ||||| Sbjct 235942 TCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAG 236001 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | || ||||| ||| |||||| ||| | ||| Sbjct 236002 ATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCA-CGTT 236060 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | ||||| |||| || || || | |||||||| || || || || || || Sbjct 236061 GTCAATGGTGTCGGAGCTC---TCAACCTCAAGGGTGATGGTCTTCCCGGTGAGAGTCTT 236117 Query 46579 AACAAAGATTTGCAT 46593 ||||||||| ||||| Sbjct 236118 AACAAAGATCTGCAT 236132 >seq6139 Length=4094 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | |||||| |||| || | ||| |||||||||||| |||||||| | Sbjct 96 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 155 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || | |||| || | |||||| || || || ||||| | ||||||||| | || Sbjct 156 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 215 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | ||| |||||| |||||| ||| | ||| | | | ||||| ||| || Sbjct 216 ATACCCTCTTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAACTC---TC 271 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||| ||||| || || || |||| ||| || |||||||||||||| Sbjct 272 CACCTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 322 >seq99 Length=1465915 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | |||||| |||| || | ||| |||||||||||| |||||||| | Sbjct 434382 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 434441 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || | |||| || | |||||| || || || ||||| | ||||||||| | || Sbjct 434442 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 434501 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | ||| |||||| |||||| ||| | ||| | | | ||||| ||| || Sbjct 434502 ATACCCTCTTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAACTC---TC 434557 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||| ||||| || || || |||| ||| || |||||||||||||| Sbjct 434558 CACCTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 434608 >seq82 Length=470516 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||||||||||||||| | ||||| | |||| || ||||||||||| ||||| Sbjct 87909 CTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGCTTGCCCGCGAA 87968 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||| | | ||||||||| | || | | ||| || || |||||| |||| | Sbjct 87969 TATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTGGCTTTGACATT 88028 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | |||||||||||||| |||| || || Sbjct 88029 GTCAATGGTGTCTGAGCTC---TCAACCTCGAGGGTGATGGTTTTGCCAGTCAAAGTCTT 88085 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 88086 CACAAAGATCTGCAT 88100 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||||||| | |||| ||| | || ||| || ||||| ||||| |||| Sbjct 88102 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 88161 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| | || || ||||| || |||||||| ||||| | |||||||| | || Sbjct 88162 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 88221 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | || ||||||||| |||||| ||| | | | | ||||| |||| || Sbjct 88222 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTC---TCG 88278 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| || || || || ||||| || || |||||||| Sbjct 88279 ACCTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 88328 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||| | ||| |||||||||||| ||||| || | || ||||| | Sbjct 87429 ACGAAGCACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCAGCGAGGGTGCGTCC 87488 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| |||||||| || || || || || | | ||||||||| | || | | ||||| Sbjct 87489 GTCTTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTT 87548 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 ||| ||||| ||||| | | | ||||| |||| || || |||| || Sbjct 87549 GTCTTGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTC---TCAACCTCCAAAGT 87605 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || ||||| || || || || ||||| || ||||| Sbjct 87606 GATAGTCTTGCCGGTTAGGGTCTTCACAAAAATCTGCAT 87644 >seq61 Length=1440766 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||||||||||||||| | ||||| | |||| || ||||||||||| ||||| Sbjct 1073847 CTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGCTTGCCCGCGAA 1073788 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||| | | ||||||||| | || | | ||| || || |||||| |||| | Sbjct 1073787 TATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTGGCTTTGACATT 1073728 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | |||||||||||||| |||| || || Sbjct 1073727 GTCAATGGTGTCTGAGCTC---TCAACCTCGAGGGTGATGGTTTTGCCAGTCAAAGTCTT 1073671 Query 46579 AACAAAGATTTGCAT 46593 |||||||| ||||| Sbjct 1073670 CACAAAGATCTGCAT 1073656 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||||||| | |||| ||| | || ||| || ||||| ||||| |||| Sbjct 1073654 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 1073595 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| | || || ||||| || |||||||| ||||| | |||||||| | || Sbjct 1073594 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 1073535 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | || ||| ||||| |||||| ||| | | | | ||||| |||| || Sbjct 1073534 ATGCCTTCCCTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTC---TCG 1073478 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| || || || || ||||| || || |||||||| Sbjct 1073477 ACCTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 1073428 >seq411 Length=621170 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||| | |||| |||||||||||||||||| || | || || || | Sbjct 568975 ACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATATTGTAATCCGCAAGGGTACGTCC 568916 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || ||||||||||| || || || || | | ||||||||| | ||| | | ||||| Sbjct 568915 ATCCTCGAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGCGGGATCCCTTCCTT 568856 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| |||||| ||| | | | | ||||| |||| || || |||| || Sbjct 568855 GTCCTGAATCTTCGCCTTTACATTATCGATTGTGTCAGAGCTC---TCAACCTCCAAAGT 568799 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || || || || || || || || || ||||| Sbjct 568798 GATGGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 568760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | ||||| ||| | || ||| || |||||||||||||| | Sbjct 568758 CCACCTCTGAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCA 568699 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||| || || || || | | |||||| || | || Sbjct 568698 AGTGTGCGACCATCCTCTAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGATCCGGTGGG 568639 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||| || ||| |||||| ||| | | | | ||||| ||| || Sbjct 568638 ATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTC---TCA 568582 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||||||||| |||| ||| || |||||||| ||||| Sbjct 568581 ACCTCAAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 568532 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||| || || | || ||||||||||||||||| || | ||| ||||| | Sbjct 569431 ACGCAACACAAGGTGAAGGGTTGATTCCTTTTGGATATTGTAATCCGCTAGCGTGCGACC 569372 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||| || || || || || | | ||| ||||| | || | | ||||| Sbjct 569371 ATCCTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTT 569312 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| ||||| |||| | | | ||||| |||| || || |||| || Sbjct 569311 GTCCTGAATCTTAGCTTTGACGTTATCAATTGTGTCTGAGCTC---TCAACTTCCAAGGT 569255 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || ||||| |||| || || ||||| |||||||| Sbjct 569254 GATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 569216 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || | || || || | || || ||||| || || ||||| Sbjct 569635 CTCCTTCTGTATGTTGTAATCTGCAAGTGTCCGACCATCCTCAAGCTGTTTTCCAGCGAA 569576 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | ||||||||| ||||| ||||| ||| Sbjct 569575 GATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGTATCTTGGCCTTGA-CGT 569517 Query 46522 CGCCACCG-TGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | || | |||| |||| || || |||| |||||| || ||||| |||| || | Sbjct 569516 TGTCAATGGTGTCTGAGCTC---TCAACCTCCAACGTGATAGTCTTGCCTGTCAAAGTCT 569460 Query 46578 TAACAAAGATTTGCAT 46593 | |||||||||||||| Sbjct 569459 TCACAAAGATTTGCAT 569444 >seq325 Length=1091643 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | ||| |||||||||||| ||||| || | ||| || || | Sbjct 552511 ACGCAGCACTAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCTAGGGTTCGACC 552452 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC-GGCCGGCACGCTCTCCT 46496 || ||||| |||||||| ||||| || | | ||||||||| || || | || |||| Sbjct 552451 ATCCTCGAGTTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCTGGTAGGATCCCT-TCCT 552393 Query 46497 TGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| |||||| ||||| | | | ||||| ||| ||| || |||| | Sbjct 552392 TGTCTTGGATCTTGGCCTTGACATTGTCTATTGTGTCTGAGCT---TTCAACCTCCAATG 552336 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| || || || || || || || |||||||| Sbjct 552335 TTATGGTTTTTCCGGTAAGGGTCTTGACGAATATTTGCAT 552296 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || ||| || ||||| ||||| || | || || || | || ||| Sbjct 552276 ACCAAATGCAGAGTTGACTCTTTCTGGATGTTGTAATCCGCAAGTGTCCGACCATCCTCG 552217 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||||||||| || || | | ||||||||| | | | || |||||||| | Sbjct 552216 AGTTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGAGTGATGCCTTCCTTGTCTTGG 552157 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| ||||| | | | |||||| ||| ||| || || | || ||||| Sbjct 552156 ATCTTGGCCTTGACATTGTCAATCGTGTCAGAGCT---TTCAACTTCAAGAGTTATGGTC 552100 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || ||||||||||||||||| Sbjct 552099 TTGCCAGTAAGGGTCTTAACAAAGATTTGCAT 552068 >seq267 Length=1500311 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||| || | || || || | || ||||| ||||||||||| || Sbjct 617995 CTCTTTCTGGATGTTGTAATCCGCAAGTGTCCGACCATCTTCGAGTTGCTTGCCGGCAAA 618054 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | |||||||| |||||| ||||| | Sbjct 618055 GATAAGTCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 618114 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| ||||| || | || ||||||||||| || || ||||| Sbjct 618115 GTCTATTGTGTCTGAGCTC---TCCACTTCTAGAGTAATGGTTTTGCCAGTGAGGGTTTT 618171 Query 46579 AACAAAGATTTGCAT 46593 ||||| |||||||| Sbjct 618172 CACAAATATTTGCAT 618186 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | | ||| || |||| ||||| || || || || || Sbjct 618223 CTCCTTCTGGATGTTGTAATCAGCCAAAGTACGACCGTCCTCGAGTTGTTTACCTGCAAA 618282 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | | | || ||||| || |||||| ||||| | Sbjct 618283 AATAAGTCTCTGCTGGTCCGGAGTGATGCCTTCCTTATCTTGGATCTTGGCCTTGACATT 618342 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || | || ||||| |||||||| || |||||||| Sbjct 618343 GTCAATCGTGTCAGAACTTTCGACCTCAAGAGTTATGGTCTTGCCCGTAAGGGTTTTAAC 618402 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 618403 AAAGATTTGCAT 618414 >seq134 Length=106205 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | ||||| ||| | ||| |||||||||||| |||||||| | Sbjct 48689 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGCA 48748 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||| || || || || || | | ||||||||| | || Sbjct 48749 AGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 48808 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||||||||| ||||| ||||| | | | ||||| |||| || Sbjct 48809 ATTCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTC---TCA 48865 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || ||||| || || || || || || ||||| || ||||| Sbjct 48866 ACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 48915 >seq60 Length=318476 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || | || || || | || || ||||| || || ||||| Sbjct 55201 CTCCTTCTGGATGTTGTAATCTGCAAGTGTCCGACCATCCTCAAGCTGTTTCCCAGCGAA 55260 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | ||||||||| ||||| ||||| ||| Sbjct 55261 GATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGA-CGT 55319 Query 46522 CGCCACCG-TGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | || | |||| |||| || || |||| |||||| || ||||| |||| || | Sbjct 55320 TGTCAATGGTGTCTGAGCTC---TCAACCTCCAACGTGATAGTCTTGCCTGTCAAAGTCT 55376 Query 46578 TAACAAAGATTTGCAT 46593 | |||||||||||||| Sbjct 55377 TCACAAAGATTTGCAT 55392 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||| | |||| |||||||||||||||||| || | || || || | Sbjct 55633 ACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATATTGTAATCAGCAAGGGTACGTCC 55692 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| || || || || | | ||||||||| | || | | ||||| Sbjct 55693 ATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTT 55752 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 |||| |||||| ||||| | | | ||||| |||| || || |||| || Sbjct 55753 GTCCTGAATCTTCGCCTTGACATTATCGATTGTGTCAGAGCTC---TCAACCTCCAAAGT 55809 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || || || || || ||||| Sbjct 55810 AATGGTCTTTCCAGTTAGGGTCTTCACGAAAATCTGCAT 55848 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | ||||| ||| | || ||| || |||||||||||||| | | Sbjct 55850 CCACCTCTGAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCT 55909 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || | || || ||||| || || | | |||||| || | || Sbjct 55910 AGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGG 55969 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||| || ||| |||||| ||| | | | | ||||| ||| || Sbjct 55970 ATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTC---TCA 56026 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||||||||| |||| ||| || |||||||| ||||| Sbjct 56027 ACCTCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 56076 >seq233 Length=166549 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | ||| ||||| | ||| |||||||||||| ||||| || | Sbjct 103774 CCACCTCTGAGACGAAGCACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGCA 103715 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || | |||||| || || || || | | |||||| || | || Sbjct 103714 AGTGTGCGACCATCCTCTAACTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 103655 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | ||||||||| ||||| ||| | | | | | | || || |||| || Sbjct 103654 ATCCCTTCCTTGTCCTGAATCTT-AGCTTTAACATTGTCAATAGTATCAGAGCTC---TC 103599 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || ||||||||||| |||| || || |||||||| ||||| Sbjct 103598 AACCTCCAAAGTAATGGTTTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 103548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565180561980720